RNA–Protein interactions for RNA: ENST00000489927.1

PLOD3-216, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-216ENST00000489927 TRPA1O75762 1119 aa20.37■□□□□ 0.85
PLOD3-216ENST00000489927 CCT4P50991 539 aaKnown RBP20.37■□□□□ 0.85
PLOD3-216ENST00000489927 TWISTNBQ3B726 338 aaPredicted RBP20.37■□□□□ 0.85
PLOD3-216ENST00000489927 UBE3BQ7Z3V4 1068 aa20.37■□□□□ 0.85
PLOD3-216ENST00000489927 CSRNP1Q96S65 589 aa20.37■□□□□ 0.85
PLOD3-216ENST00000489927 MXD3Q9BW11 206 aa20.37■□□□□ 0.85
PLOD3-216ENST00000489927 H7C1W4 665 aa20.36■□□□□ 0.85
PLOD3-216ENST00000489927 SLC4A2P04920 1241 aa20.36■□□□□ 0.85
PLOD3-216ENST00000489927 CCDC27Q2M243 656 aa20.36■□□□□ 0.85
PLOD3-216ENST00000489927 DACT2Q5SW24 774 aa20.36■□□□□ 0.85
PLOD3-216ENST00000489927 RASAL3Q86YV0 1011 aa20.36■□□□□ 0.85
PLOD3-216ENST00000489927 WWC1Q8IX03 1113 aa20.36■□□□□ 0.85
PLOD3-216ENST00000489927 SPEF2Q9C093 1822 aa20.36■□□□□ 0.85
PLOD3-216ENST00000489927 FKBP1BP68106 108 aa20.35■□□□□ 0.85
PLOD3-216ENST00000489927 NBPF9Q3BBW0 867 aa20.35■□□□□ 0.85
PLOD3-216ENST00000489927 MYH3P11055 1940 aa20.35■□□□□ 0.85
PLOD3-216ENST00000489927 PAPPA2Q9BXP8 1791 aa20.34■□□□□ 0.85
PLOD3-216ENST00000489927 MOB2Q70IA6 237 aa20.34■□□□□ 0.85
PLOD3-216ENST00000489927 TXNRD3Q86VQ6 643 aa20.34■□□□□ 0.85
PLOD3-216ENST00000489927 FBXW7Q969H0 707 aa20.34■□□□□ 0.85
PLOD3-216ENST00000489927 ZNF646O15015 1829 aaPredicted RBP20.33■□□□□ 0.85
PLOD3-216ENST00000489927 IGHMBP2P38935 993 aaKnown RBP20.33■□□□□ 0.85
PLOD3-216ENST00000489927 GCKRQ14397 625 aa20.33■□□□□ 0.85
PLOD3-216ENST00000489927 STRIP1Q5VSL9 837 aa20.33■□□□□ 0.85
PLOD3-216ENST00000489927 PRAMEF18Q5VWM3 479 aa20.33■□□□□ 0.85
PLOD3-216ENST00000489927 OGFOD1Q8N543 542 aa20.33■□□□□ 0.85
PLOD3-216ENST00000489927 COA1Q9GZY4 146 aa20.33■□□□□ 0.85
PLOD3-216ENST00000489927 LEMD3Q9Y2U8 911 aa20.33■□□□□ 0.85
PLOD3-216ENST00000489927 MYO3BQ8WXR4 1341 aa20.32■□□□□ 0.84
PLOD3-216ENST00000489927 ITGA6P23229 1130 aa20.32■□□□□ 0.84
PLOD3-216ENST00000489927 KLRK1P26718 216 aa20.32■□□□□ 0.84
PLOD3-216ENST00000489927 REM2Q8IYK8 340 aaPredicted RBP20.32■□□□□ 0.84
PLOD3-216ENST00000489927 PLA2G12BQ9BX93 195 aa20.32■□□□□ 0.84
PLOD3-216ENST00000489927 ZNF804BA4D1E1 1349 aa20.31■□□□□ 0.84
PLOD3-216ENST00000489927 UBE2Q2LH0YL09 131 aa20.31■□□□□ 0.84
PLOD3-216ENST00000489927 WNT10BO00744 389 aa20.31■□□□□ 0.84
PLOD3-216ENST00000489927 CASP7P55210 303 aa20.31■□□□□ 0.84
PLOD3-216ENST00000489927 FLIIQ13045 1269 aa20.31■□□□□ 0.84
PLOD3-216ENST00000489927 IL16Q14005 1332 aa20.3■□□□□ 0.84
PLOD3-216ENST00000489927 MPHOSPH8Q99549 860 aa20.3■□□□□ 0.84
PLOD3-216ENST00000489927 ANKRD2Q9GZV1 360 aa20.3■□□□□ 0.84
PLOD3-216ENST00000489927 AKAP11Q9UKA4 1901 aa20.29■□□□□ 0.84
PLOD3-216ENST00000489927 SASH1O94885 1247 aa20.29■□□□□ 0.84
PLOD3-216ENST00000489927 CSF1RP07333 972 aa20.29■□□□□ 0.84
PLOD3-216ENST00000489927 FKBP5Q13451 457 aaPredicted RBP20.29■□□□□ 0.84
PLOD3-216ENST00000489927 TTLL5Q6EMB2 1281 aa20.29■□□□□ 0.84
PLOD3-216ENST00000489927 DNAAF4Q8WXU2 420 aa20.29■□□□□ 0.84
PLOD3-216ENST00000489927 TTLL12Q14166 644 aaPredicted RBP20.28■□□□□ 0.84
PLOD3-216ENST00000489927 LINS1Q8NG48 757 aa20.28■□□□□ 0.84
PLOD3-216ENST00000489927 MYH16Q9H6N6 1097 aa20.28■□□□□ 0.84
PLOD3-216ENST00000489927 FANCIQ9NVI1 1328 aa20.27■□□□□ 0.84
PLOD3-216ENST00000489927 TNRC18O15417 2968 aaPredicted RBP20.27■□□□□ 0.84
PLOD3-216ENST00000489927 CHRNDQ07001 517 aa20.27■□□□□ 0.84
PLOD3-216ENST00000489927 KIAA0825Q8IV33 1275 aa20.27■□□□□ 0.84
PLOD3-216ENST00000489927 KCNJ4P48050 445 aa20.26■□□□□ 0.83
PLOD3-216ENST00000489927 MMP14P50281 582 aa20.26■□□□□ 0.83
PLOD3-216ENST00000489927 GTF2IP78347 998 aa20.26■□□□□ 0.83
PLOD3-216ENST00000489927 NCBP3Q53F19 620 aaKnown RBP20.26■□□□□ 0.83
PLOD3-216ENST00000489927 CTU1Q7Z7A3 348 aaKnown RBP20.26■□□□□ 0.83
PLOD3-216ENST00000489927 NF2P35240 595 aa20.25■□□□□ 0.83
PLOD3-216ENST00000489927 HDAC9Q9UKV0 1011 aa20.25■□□□□ 0.83
PLOD3-216ENST00000489927 ANKRD18BA2A2Z9 1011 aa20.24■□□□□ 0.83
PLOD3-216ENST00000489927 SNAP23O00161 211 aa20.24■□□□□ 0.83
PLOD3-216ENST00000489927 VAMP4O75379 141 aa20.24■□□□□ 0.83
PLOD3-216ENST00000489927 SOX10P56693 466 aa20.24■□□□□ 0.83
PLOD3-216ENST00000489927 MKRN3Q13064 507 aaKnown RBP20.24■□□□□ 0.83
PLOD3-216ENST00000489927 ZBED3Q96IU2 234 aaPredicted RBP20.24■□□□□ 0.83
PLOD3-216ENST00000489927 CD209Q9NNX6 404 aa20.24■□□□□ 0.83
PLOD3-216ENST00000489927 IRS2Q9Y4H2 1338 aa20.24■□□□□ 0.83
PLOD3-216ENST00000489927 TAF5LO75529 589 aa20.23■□□□□ 0.83
PLOD3-216ENST00000489927 SLC34A2O95436 690 aa20.23■□□□□ 0.83
PLOD3-216ENST00000489927 TBC1D8O95759 1140 aa20.23■□□□□ 0.83
PLOD3-216ENST00000489927 PRKG1Q13976 671 aa20.23■□□□□ 0.83
PLOD3-216ENST00000489927 APOBEC3FQ8IUX4 373 aaKnown RBP20.23■□□□□ 0.83
PLOD3-216ENST00000489927 SALL2Q9Y467 1007 aaPredicted RBP20.23■□□□□ 0.83
PLOD3-216ENST00000489927 TM4SF4P48230 202 aa20.22■□□□□ 0.83
PLOD3-216ENST00000489927 FOXO4P98177 505 aa20.22■□□□□ 0.83
PLOD3-216ENST00000489927 PTPN12Q05209 780 aaKnown RBP20.22■□□□□ 0.83
PLOD3-216ENST00000489927 EXOSC9Q06265 439 aaKnown RBP20.22■□□□□ 0.83
PLOD3-216ENST00000489927 HELBQ8NG08 1087 aaPredicted RBP20.22■□□□□ 0.83
PLOD3-216ENST00000489927 MRS2Q9HD23 443 aa20.22■□□□□ 0.83
PLOD3-216ENST00000489927 F6X3S4 739 aa20.21■□□□□ 0.83
PLOD3-216ENST00000489927 IFIT5Q13325 482 aaKnown RBP20.21■□□□□ 0.83
PLOD3-216ENST00000489927 CERS5Q8N5B7 392 aa20.21■□□□□ 0.83
PLOD3-216ENST00000489927 ZNF296Q8WUU4 475 aaPredicted RBP20.21■□□□□ 0.83
PLOD3-216ENST00000489927 BEND3Q5T5X7 828 aa20.2■□□□□ 0.82
PLOD3-216ENST00000489927 C15orf52Q6ZUT6 534 aaKnown RBP20.2■□□□□ 0.82
PLOD3-216ENST00000489927 ARMC9Q7Z3E5 817 aa20.2■□□□□ 0.82
PLOD3-216ENST00000489927 WDR63Q8IWG1 891 aa20.2■□□□□ 0.82
PLOD3-216ENST00000489927 FZD1Q9UP38 647 aa20.2■□□□□ 0.82
PLOD3-216ENST00000489927 CHMP3Q9Y3E7 222 aa20.2■□□□□ 0.82
PLOD3-216ENST00000489927 DLGAP5Q15398 846 aa20.19■□□□□ 0.82
PLOD3-216ENST00000489927 LDLRAD1Q5T700 205 aa20.19■□□□□ 0.82
PLOD3-216ENST00000489927 DEFB129Q9H1M3 183 aa20.19■□□□□ 0.82
PLOD3-216ENST00000489927 ANGEL1Q9UNK9 670 aaKnown RBP20.19■□□□□ 0.82
PLOD3-216ENST00000489927 HPS5Q9UPZ3 1129 aa20.19■□□□□ 0.82
PLOD3-216ENST00000489927 PCDHAC2Q9Y5I4 1007 aa20.19■□□□□ 0.82
PLOD3-216ENST00000489927 SREBF2Q12772 1141 aa20.18■□□□□ 0.82
PLOD3-216ENST00000489927 EPHA10Q5JZY3 1008 aa20.18■□□□□ 0.82
PLOD3-216ENST00000489927 MTMR14Q8NCE2 650 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms