RNA–Protein interactions for RNA: ENST00000489836.1

AC055748.1-201, humanhuman

BASIC

Gene AC055748.1, Length 959 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055748.1-201ENST00000489836 ZC3H4Q9UPT8 1303 aaKnown RBP13.26□□□□□ -0.29
AC055748.1-201ENST00000489836 SCN11AQ9UI33 1791 aa13.25□□□□□ -0.29
AC055748.1-201ENST00000489836 QSER1Q2KHR3 1735 aa13.25□□□□□ -0.29
AC055748.1-201ENST00000489836 GNAT3A8MTJ3 354 aa13.25□□□□□ -0.29
AC055748.1-201ENST00000489836 ZBTB33Q86T24 672 aa13.25□□□□□ -0.29
AC055748.1-201ENST00000489836 PLEKHF1Q96S99 279 aa13.25□□□□□ -0.29
AC055748.1-201ENST00000489836 MTFR1LQ9H019 292 aa13.25□□□□□ -0.29
AC055748.1-201ENST00000489836 TFCP2L1Q9NZI6 479 aa13.25□□□□□ -0.29
AC055748.1-201ENST00000489836 CEMIPQ8WUJ3 1361 aa13.24□□□□□ -0.29
AC055748.1-201ENST00000489836 MAP3K5Q99683 1374 aa13.24□□□□□ -0.29
AC055748.1-201ENST00000489836 ZBTB7AO95365 584 aa13.24□□□□□ -0.29
AC055748.1-201ENST00000489836 PTK2Q05397 1052 aa13.24□□□□□ -0.29
AC055748.1-201ENST00000489836 LINC00116Q8NCU8 138 aa13.24□□□□□ -0.29
AC055748.1-201ENST00000489836 ITPKCQ96DU7 683 aa13.24□□□□□ -0.29
AC055748.1-201ENST00000489836 MAP4K5Q9Y4K4 846 aa13.24□□□□□ -0.29
AC055748.1-201ENST00000489836 ZNF831Q5JPB2 1677 aa13.24□□□□□ -0.29
AC055748.1-201ENST00000489836 TAF1LQ8IZX4 1826 aa13.23□□□□□ -0.29
AC055748.1-201ENST00000489836 ZIC2O95409 532 aaPredicted RBP13.23□□□□□ -0.29
AC055748.1-201ENST00000489836 COL23A1Q86Y22 540 aaPredicted RBP13.23□□□□□ -0.29
AC055748.1-201ENST00000489836 ADAM32Q8TC27 787 aa13.23□□□□□ -0.29
AC055748.1-201ENST00000489836 C5P01031 1676 aa13.23□□□□□ -0.29
AC055748.1-201ENST00000489836 C4BP0C0L5 1744 aa13.22□□□□□ -0.29
AC055748.1-201ENST00000489836 HTATSF1O43719 755 aaKnown RBP13.22□□□□□ -0.29
AC055748.1-201ENST00000489836 AMIGO3Q86WK7 504 aa13.22□□□□□ -0.29
AC055748.1-201ENST00000489836 FLAD1Q8NFF5 587 aa13.22□□□□□ -0.29
AC055748.1-201ENST00000489836 TRIM47Q96LD4 638 aa13.22□□□□□ -0.29
AC055748.1-201ENST00000489836 SLC10A4Q96EP9 437 aa13.21□□□□□ -0.29
AC055748.1-201ENST00000489836 SENP2Q9HC62 589 aa13.21□□□□□ -0.29
AC055748.1-201ENST00000489836 TUBGCP6Q96RT7 1819 aa13.2□□□□□ -0.3
AC055748.1-201ENST00000489836 PTCD1O75127 700 aaKnown RBP13.2□□□□□ -0.3
AC055748.1-201ENST00000489836 SSFA2P28290 1259 aa13.2□□□□□ -0.3
AC055748.1-201ENST00000489836 SLC39A6Q13433 755 aa13.2□□□□□ -0.3
AC055748.1-201ENST00000489836 PNMA1Q8ND90 353 aa13.2□□□□□ -0.3
AC055748.1-201ENST00000489836 SNRKQ9NRH2 765 aa13.2□□□□□ -0.3
AC055748.1-201ENST00000489836 CICQ96RK0 1608 aaPredicted RBP13.2□□□□□ -0.3
AC055748.1-201ENST00000489836 CNTNAP4Q9C0A0 1308 aa13.19□□□□□ -0.3
AC055748.1-201ENST00000489836 PNNQ9H307 717 aaKnown RBP13.19□□□□□ -0.3
AC055748.1-201ENST00000489836 GPSM3Q9Y4H4 160 aa13.19□□□□□ -0.3
AC055748.1-201ENST00000489836 COL24A1Q17RW2 1714 aa13.19□□□□□ -0.3
AC055748.1-201ENST00000489836 KCPQ6ZWJ8 1503 aa13.18□□□□□ -0.3
AC055748.1-201ENST00000489836 TEFQ10587 303 aa13.18□□□□□ -0.3
AC055748.1-201ENST00000489836 MTMR14Q8NCE2 650 aa13.18□□□□□ -0.3
AC055748.1-201ENST00000489836 RPS6KA4O75676 772 aa13.17□□□□□ -0.3
AC055748.1-201ENST00000489836 NFE2L2Q16236 605 aa13.17□□□□□ -0.3
AC055748.1-201ENST00000489836 MRPL14Q6P1L8 145 aaKnown RBP13.17□□□□□ -0.3
AC055748.1-201ENST00000489836 ZNF790Q6PG37 636 aa13.17□□□□□ -0.3
AC055748.1-201ENST00000489836 SMIM5Q71RC9 77 aa13.17□□□□□ -0.3
AC055748.1-201ENST00000489836 CCDC116Q8IYX3 515 aa13.17□□□□□ -0.3
AC055748.1-201ENST00000489836 BANK1Q8NDB2 785 aa13.17□□□□□ -0.3
AC055748.1-201ENST00000489836 ZFP42Q96MM3 310 aa13.17□□□□□ -0.3
AC055748.1-201ENST00000489836 KCTD15Q96SI1 283 aaPredicted RBP13.17□□□□□ -0.3
AC055748.1-201ENST00000489836 UBR3Q6ZT12 1888 aa13.16□□□□□ -0.3
AC055748.1-201ENST00000489836 COL5A3P25940 1745 aaPredicted RBP13.16□□□□□ -0.3
AC055748.1-201ENST00000489836 VIRMAQ69YN4 1812 aaKnown RBP13.16□□□□□ -0.3
AC055748.1-201ENST00000489836 NEFMP07197 916 aa13.16□□□□□ -0.3
AC055748.1-201ENST00000489836 CRKLP46109 303 aaKnown RBP13.16□□□□□ -0.3
AC055748.1-201ENST00000489836 DCTN1Q14203 1278 aa13.16□□□□□ -0.3
AC055748.1-201ENST00000489836 INTS5Q6P9B9 1019 aaKnown RBP13.16□□□□□ -0.3
AC055748.1-201ENST00000489836 MCM10Q7L590 875 aa13.16□□□□□ -0.3
AC055748.1-201ENST00000489836 DNAJC10Q8IXB1 793 aa13.16□□□□□ -0.3
AC055748.1-201ENST00000489836 RTF1Q92541 710 aaKnown RBP13.16□□□□□ -0.3
AC055748.1-201ENST00000489836 KIFC2Q96AC6 838 aa13.16□□□□□ -0.3
AC055748.1-201ENST00000489836 PURBQ96QR8 312 aaKnown RBP13.16□□□□□ -0.3
AC055748.1-201ENST00000489836 PPP1R1BQ9UD71 204 aaPredicted RBP13.16□□□□□ -0.3
AC055748.1-201ENST00000489836 RTCBQ9Y3I0 505 aaKnown RBP13.16□□□□□ -0.3
AC055748.1-201ENST00000489836 SIPA1L3O60292 1781 aaPredicted RBP13.16□□□□□ -0.3
AC055748.1-201ENST00000489836 CYP19A1P11511 503 aaPredicted RBP13.15□□□□□ -0.3
AC055748.1-201ENST00000489836 ZNF496Q96IT1 587 aaPredicted RBP13.15□□□□□ -0.3
AC055748.1-201ENST00000489836 ARXQ96QS3 562 aa13.15□□□□□ -0.3
AC055748.1-201ENST00000489836 ADAMTS8Q9UP79 889 aa13.15□□□□□ -0.3
AC055748.1-201ENST00000489836 TJP1Q07157 1748 aa13.15□□□□□ -0.3
AC055748.1-201ENST00000489836 BTBD11A6QL63 1104 aa13.14□□□□□ -0.31
AC055748.1-201ENST00000489836 KCNQ3O43525 872 aa13.14□□□□□ -0.31
AC055748.1-201ENST00000489836 TTC5Q8N0Z6 440 aa13.14□□□□□ -0.31
AC055748.1-201ENST00000489836 HEG1Q9ULI3 1381 aa13.14□□□□□ -0.31
AC055748.1-201ENST00000489836 UBR2Q8IWV8 1755 aa13.14□□□□□ -0.31
AC055748.1-201ENST00000489836 MAPK8IP3Q9UPT6 1336 aa13.13□□□□□ -0.31
AC055748.1-201ENST00000489836 TMPOP42166 694 aaKnown RBP13.13□□□□□ -0.31
AC055748.1-201ENST00000489836 TAF7Q15545 349 aaPredicted RBP13.13□□□□□ -0.31
AC055748.1-201ENST00000489836 INTS6LQ5JSJ4 861 aaKnown RBP13.13□□□□□ -0.31
AC055748.1-201ENST00000489836 TRAPPC3LQ5T215 181 aa13.13□□□□□ -0.31
AC055748.1-201ENST00000489836 PPP1R26Q5T8A7 1209 aaPredicted RBP13.13□□□□□ -0.31
AC055748.1-201ENST00000489836 SYT17Q9BSW7 474 aa13.13□□□□□ -0.31
AC055748.1-201ENST00000489836 MYH14Q7Z406 1995 aaKnown RBP13.12□□□□□ -0.31
AC055748.1-201ENST00000489836 POLD1P28340 1107 aa13.12□□□□□ -0.31
AC055748.1-201ENST00000489836 RAB15P59190 212 aa13.12□□□□□ -0.31
AC055748.1-201ENST00000489836 WDR43Q15061 677 aaKnown RBP eCLIP13.12□□□□□ -0.31
AC055748.1-201ENST00000489836 CCDC184Q52MB2 194 aa13.12□□□□□ -0.31
AC055748.1-201ENST00000489836 C6orf118Q5T5N4 469 aa13.12□□□□□ -0.31
AC055748.1-201ENST00000489836 DZIP3Q86Y13 1208 aaKnown RBP13.12□□□□□ -0.31
AC055748.1-201ENST00000489836 RUNDC1Q96C34 613 aa13.12□□□□□ -0.31
AC055748.1-201ENST00000489836 FMNL2Q96PY5 1086 aa13.12□□□□□ -0.31
AC055748.1-201ENST00000489836 TEX13AQ9BXU3 409 aaPredicted RBP13.12□□□□□ -0.31
AC055748.1-201ENST00000489836 FHDC1Q9C0D6 1143 aaPredicted RBP13.12□□□□□ -0.31
AC055748.1-201ENST00000489836 CCDC87Q9NVE4 849 aa13.12□□□□□ -0.31
AC055748.1-201ENST00000489836 GPR37L1O60883 481 aa13.11□□□□□ -0.31
AC055748.1-201ENST00000489836 FBXO45P0C2W1 286 aa13.11□□□□□ -0.31
AC055748.1-201ENST00000489836 RIPK4P57078 832 aa13.11□□□□□ -0.31
AC055748.1-201ENST00000489836 MSL1Q68DK7 614 aa13.11□□□□□ -0.31
AC055748.1-201ENST00000489836 CDV3Q9UKY7 258 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms