RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 PDLIM2Q96JY6 352 aa17.72■□□□□ 0.43
COL9A1-208ENST00000489611 NUP98P52948 1817 aa17.71■□□□□ 0.43
COL9A1-208ENST00000489611 VPS37CA5D8V6 355 aaPredicted RBP17.71■□□□□ 0.43
COL9A1-208ENST00000489611 NECAB1Q8N987 351 aa17.71■□□□□ 0.43
COL9A1-208ENST00000489611 SCAND2PQ9GZW5 306 aaPredicted RBP17.71■□□□□ 0.43
COL9A1-208ENST00000489611 CICQ96RK0 1608 aaPredicted RBP17.71■□□□□ 0.43
COL9A1-208ENST00000489611 ANKRD18BA2A2Z9 1011 aa17.7■□□□□ 0.42
COL9A1-208ENST00000489611 HSP90B1P14625 803 aaKnown RBP17.7■□□□□ 0.42
COL9A1-208ENST00000489611 UVSSAQ2YD98 709 aa17.7■□□□□ 0.42
COL9A1-208ENST00000489611 ZSCAN25Q6NSZ9 544 aa17.7■□□□□ 0.42
COL9A1-208ENST00000489611 FAM89AQ96GI7 184 aa17.7■□□□□ 0.42
COL9A1-208ENST00000489611 XAGE2Q96GT9 111 aa17.7■□□□□ 0.42
COL9A1-208ENST00000489611 CHAMP1Q96JM3 812 aa17.7■□□□□ 0.42
COL9A1-208ENST00000489611 AGXT2Q9BYV1 514 aa17.7■□□□□ 0.42
COL9A1-208ENST00000489611 RRAGDQ9NQL2 400 aaPredicted RBP17.7■□□□□ 0.42
COL9A1-208ENST00000489611 LAMA4Q16363 1823 aa17.7■□□□□ 0.42
COL9A1-208ENST00000489611 CTSWP56202 376 aa17.7■□□□□ 0.42
COL9A1-208ENST00000489611 TTF1Q15361 905 aaPredicted RBP17.7■□□□□ 0.42
COL9A1-208ENST00000489611 SEC62Q99442 399 aaKnown RBP17.7■□□□□ 0.42
COL9A1-208ENST00000489611 PUS3Q9BZE2 481 aaKnown RBP17.7■□□□□ 0.42
COL9A1-208ENST00000489611 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.7■□□□□ 0.42
COL9A1-208ENST00000489611 MYH7P12883 1935 aa17.7■□□□□ 0.42
COL9A1-208ENST00000489611 GADD45BO75293 160 aaPredicted RBP17.69■□□□□ 0.42
COL9A1-208ENST00000489611 HSPD1P10809 573 aaKnown RBP17.69■□□□□ 0.42
COL9A1-208ENST00000489611 CRKLP46109 303 aaKnown RBP17.69■□□□□ 0.42
COL9A1-208ENST00000489611 RBM6P78332 1123 aaKnown RBP17.69■□□□□ 0.42
COL9A1-208ENST00000489611 HMGN5P82970 282 aaKnown RBP17.69■□□□□ 0.42
COL9A1-208ENST00000489611 FGD1P98174 961 aa17.69■□□□□ 0.42
COL9A1-208ENST00000489611 INTS5Q6P9B9 1019 aaKnown RBP17.69■□□□□ 0.42
COL9A1-208ENST00000489611 Q6ZUG5 572 aa17.69■□□□□ 0.42
COL9A1-208ENST00000489611 TTLL11Q8NHH1 800 aa17.69■□□□□ 0.42
COL9A1-208ENST00000489611 ZSCAN16Q9H4T2 348 aaPredicted RBP17.69■□□□□ 0.42
COL9A1-208ENST00000489611 NDUFB9Q9Y6M9 179 aa17.69■□□□□ 0.42
COL9A1-208ENST00000489611 MAST3O60307 1309 aa17.69■□□□□ 0.42
COL9A1-208ENST00000489611 PDE8AO60658 829 aa17.68■□□□□ 0.42
COL9A1-208ENST00000489611 CCDC129Q6ZRS4 1044 aa17.68■□□□□ 0.42
COL9A1-208ENST00000489611 KRT27Q7Z3Y8 459 aa17.68■□□□□ 0.42
COL9A1-208ENST00000489611 GDPD2Q9HCC8 539 aa17.68■□□□□ 0.42
COL9A1-208ENST00000489611 RIPOR2Q9Y4F9 1068 aa17.68■□□□□ 0.42
COL9A1-208ENST00000489611 PFKFB2O60825 505 aa17.68■□□□□ 0.42
COL9A1-208ENST00000489611 DNM1Q05193 864 aaKnown RBP17.68■□□□□ 0.42
COL9A1-208ENST00000489611 ATP2B3Q16720 1220 aa17.68■□□□□ 0.42
COL9A1-208ENST00000489611 LDHAL6AQ6ZMR3 332 aa17.68■□□□□ 0.42
COL9A1-208ENST00000489611 CCDC87Q9NVE4 849 aa17.68■□□□□ 0.42
COL9A1-208ENST00000489611 FIBPO43427 364 aa17.67■□□□□ 0.42
COL9A1-208ENST00000489611 ITGA6P23229 1130 aa17.67■□□□□ 0.42
COL9A1-208ENST00000489611 EXOSC10Q01780 885 aaKnown RBP17.67■□□□□ 0.42
COL9A1-208ENST00000489611 FOXD4L6Q3SYB3 417 aaPredicted RBP17.67■□□□□ 0.42
COL9A1-208ENST00000489611 METTL24Q5JXM2 366 aa17.67■□□□□ 0.42
COL9A1-208ENST00000489611 FOXD4L3Q6VB84 417 aaPredicted RBP17.67■□□□□ 0.42
COL9A1-208ENST00000489611 ZSCAN30Q86W11 494 aa17.67■□□□□ 0.42
COL9A1-208ENST00000489611 APPBP2Q92624 585 aa17.67■□□□□ 0.42
COL9A1-208ENST00000489611 ZNF274Q96GC6 653 aaPredicted RBP17.67■□□□□ 0.42
COL9A1-208ENST00000489611 TAF6LQ9Y6J9 622 aa17.67■□□□□ 0.42
COL9A1-208ENST00000489611 IRS4O14654 1257 aaPredicted RBP17.66■□□□□ 0.42
COL9A1-208ENST00000489611 FKBP4Q02790 459 aaKnown RBP eCLIP17.66■□□□□ 0.42
COL9A1-208ENST00000489611 TRMT112Q9UI30 125 aaKnown RBP17.66■□□□□ 0.42
COL9A1-208ENST00000489611 RIC1Q4ADV7 1423 aa17.66■□□□□ 0.42
COL9A1-208ENST00000489611 IMMTQ16891 758 aaKnown RBP17.66■□□□□ 0.42
COL9A1-208ENST00000489611 DZIP3Q86Y13 1208 aaKnown RBP17.66■□□□□ 0.42
COL9A1-208ENST00000489611 LINC00116Q8NCU8 138 aa17.66■□□□□ 0.42
COL9A1-208ENST00000489611 SMARCC2Q8TAQ2 1214 aa17.66■□□□□ 0.42
COL9A1-208ENST00000489611 TBC1D2BQ9UPU7 963 aa17.66■□□□□ 0.42
COL9A1-208ENST00000489611 NHSQ6T4R5 1651 aa17.66■□□□□ 0.42
COL9A1-208ENST00000489611 RREB1Q92766 1687 aa17.66■□□□□ 0.42
COL9A1-208ENST00000489611 WDR19Q8NEZ3 1342 aa17.65■□□□□ 0.42
COL9A1-208ENST00000489611 E7EWF7 191 aa17.65■□□□□ 0.42
COL9A1-208ENST00000489611 MCM5P33992 734 aa17.65■□□□□ 0.42
COL9A1-208ENST00000489611 HLFQ16534 295 aa17.65■□□□□ 0.42
COL9A1-208ENST00000489611 ATL3Q6DD88 541 aa17.65■□□□□ 0.42
COL9A1-208ENST00000489611 ZNF34Q8IZ26 560 aa17.65■□□□□ 0.42
COL9A1-208ENST00000489611 BRF1Q92994 677 aa17.65■□□□□ 0.42
COL9A1-208ENST00000489611 TCEANC2Q96MN5 208 aa17.65■□□□□ 0.42
COL9A1-208ENST00000489611 CNNM1Q9NRU3 951 aa17.65■□□□□ 0.42
COL9A1-208ENST00000489611 LRP5O75197 1615 aa17.65■□□□□ 0.42
COL9A1-208ENST00000489611 MROH5Q6ZUA9 1318 aa17.65■□□□□ 0.42
COL9A1-208ENST00000489611 UQCRFS1P1P0C7P4 283 aa17.64■□□□□ 0.42
COL9A1-208ENST00000489611 EIF5P55010 431 aaKnown RBP17.64■□□□□ 0.42
COL9A1-208ENST00000489611 NAA16Q6N069 864 aaPredicted RBP17.64■□□□□ 0.42
COL9A1-208ENST00000489611 RGS22Q8NE09 1264 aa17.64■□□□□ 0.42
COL9A1-208ENST00000489611 RGS17Q9UGC6 210 aaPredicted RBP17.64■□□□□ 0.42
COL9A1-208ENST00000489611 CFAP45Q9UL16 551 aa17.64■□□□□ 0.42
COL9A1-208ENST00000489611 ARAP2Q8WZ64 1704 aa17.64■□□□□ 0.41
COL9A1-208ENST00000489611 BTAF1O14981 1849 aa17.64■□□□□ 0.41
COL9A1-208ENST00000489611 EVCP57679 992 aa17.64■□□□□ 0.41
COL9A1-208ENST00000489611 PARP10Q53GL7 1025 aa17.64■□□□□ 0.41
COL9A1-208ENST00000489611 FAM196AQ6ZSG2 479 aa17.64■□□□□ 0.41
COL9A1-208ENST00000489611 CDC37L1Q7L3B6 337 aa17.64■□□□□ 0.41
COL9A1-208ENST00000489611 ILDR1Q86SU0 546 aaPredicted RBP17.64■□□□□ 0.41
COL9A1-208ENST00000489611 BCL11BQ9C0K0 894 aaPredicted RBP17.64■□□□□ 0.41
COL9A1-208ENST00000489611 PDE8BO95263 885 aa17.63■□□□□ 0.41
COL9A1-208ENST00000489611 STOX1Q6ZVD7 989 aa17.63■□□□□ 0.41
COL9A1-208ENST00000489611 OSBP2Q969R2 916 aa17.63■□□□□ 0.41
COL9A1-208ENST00000489611 GREM2Q9H772 168 aa17.63■□□□□ 0.41
COL9A1-208ENST00000489611 AKAP11Q9UKA4 1901 aa17.63■□□□□ 0.41
COL9A1-208ENST00000489611 ZNF831Q5JPB2 1677 aa17.63■□□□□ 0.41
COL9A1-208ENST00000489611 H3BQV1 296 aa17.62■□□□□ 0.41
COL9A1-208ENST00000489611 DHX16O60231 1041 aaKnown RBP17.62■□□□□ 0.41
COL9A1-208ENST00000489611 MSNP26038 577 aaKnown RBP17.62■□□□□ 0.41
COL9A1-208ENST00000489611 RXRBP28702 533 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms