RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 TRPA1O75762 1119 aa24.84■■□□□ 1.57
APTX-229ENST00000489583 MMP14P50281 582 aa24.84■■□□□ 1.57
APTX-229ENST00000489583 TTLL12Q14166 644 aaPredicted RBP24.84■■□□□ 1.57
APTX-229ENST00000489583 CWF19L2Q2TBE0 894 aaKnown RBP24.84■■□□□ 1.57
APTX-229ENST00000489583 ZIC5Q96T25 663 aa24.84■■□□□ 1.57
APTX-229ENST00000489583 COA1Q9GZY4 146 aa24.84■■□□□ 1.57
APTX-229ENST00000489583 LEMD3Q9Y2U8 911 aa24.84■■□□□ 1.57
APTX-229ENST00000489583 ZNF609O15014 1411 aa24.84■■□□□ 1.57
APTX-229ENST00000489583 COL4A1P02462 1669 aa24.84■■□□□ 1.57
APTX-229ENST00000489583 SLC10A3P09131 477 aa24.83■■□□□ 1.57
APTX-229ENST00000489583 FKBP5Q13451 457 aaPredicted RBP24.83■■□□□ 1.57
APTX-229ENST00000489583 HDAC9Q9UKV0 1011 aa24.83■■□□□ 1.57
APTX-229ENST00000489583 WWC1Q8IX03 1113 aa24.82■■□□□ 1.56
APTX-229ENST00000489583 ASTN2O75129 1339 aaPredicted RBP24.82■■□□□ 1.56
APTX-229ENST00000489583 STRIP1Q5VSL9 837 aa24.81■■□□□ 1.56
APTX-229ENST00000489583 GMLQ99445 158 aa24.81■■□□□ 1.56
APTX-229ENST00000489583 RNF186Q9NXI6 227 aa24.81■■□□□ 1.56
APTX-229ENST00000489583 IL16Q14005 1332 aa24.81■■□□□ 1.56
APTX-229ENST00000489583 POLR2AP24928 1970 aaKnown RBP24.8■■□□□ 1.56
APTX-229ENST00000489583 ITGA6P23229 1130 aa24.8■■□□□ 1.56
APTX-229ENST00000489583 SCN9AQ15858 1988 aa24.8■■□□□ 1.56
APTX-229ENST00000489583 H7C1W4 665 aa24.79■■□□□ 1.56
APTX-229ENST00000489583 FLIIQ13045 1269 aa24.79■■□□□ 1.56
APTX-229ENST00000489583 GCKRQ14397 625 aa24.79■■□□□ 1.56
APTX-229ENST00000489583 CASP8AP2Q9UKL3 1982 aa24.78■■□□□ 1.56
APTX-229ENST00000489583 TTLL5Q6EMB2 1281 aa24.78■■□□□ 1.56
APTX-229ENST00000489583 DNAAF4Q8WXU2 420 aa24.78■■□□□ 1.56
APTX-229ENST00000489583 CSRNP1Q96S65 589 aa24.78■■□□□ 1.56
APTX-229ENST00000489583 ZNF804BA4D1E1 1349 aa24.78■■□□□ 1.56
APTX-229ENST00000489583 DACT2Q5SW24 774 aa24.77■■□□□ 1.56
APTX-229ENST00000489583 ANKRD18BA2A2Z9 1011 aa24.76■■□□□ 1.55
APTX-229ENST00000489583 RGS19P49795 217 aa24.76■■□□□ 1.55
APTX-229ENST00000489583 NBPF9Q3BBW0 867 aa24.76■■□□□ 1.55
APTX-229ENST00000489583 G2E3Q7L622 706 aa24.76■■□□□ 1.55
APTX-229ENST00000489583 RASAL3Q86YV0 1011 aa24.76■■□□□ 1.55
APTX-229ENST00000489583 LINS1Q8NG48 757 aa24.76■■□□□ 1.55
APTX-229ENST00000489583 PLA2G12BQ9BX93 195 aa24.76■■□□□ 1.55
APTX-229ENST00000489583 CHMP3Q9Y3E7 222 aa24.76■■□□□ 1.55
APTX-229ENST00000489583 NCBP3Q53F19 620 aaKnown RBP24.75■■□□□ 1.55
APTX-229ENST00000489583 APOBEC3FQ8IUX4 373 aaKnown RBP24.75■■□□□ 1.55
APTX-229ENST00000489583 MRS2Q9HD23 443 aa24.75■■□□□ 1.55
APTX-229ENST00000489583 MYH3P11055 1940 aa24.74■■□□□ 1.55
APTX-229ENST00000489583 ARMC9Q7Z3E5 817 aa24.74■■□□□ 1.55
APTX-229ENST00000489583 PAPPA2Q9BXP8 1791 aa24.73■■□□□ 1.55
APTX-229ENST00000489583 UBE2Q2LH0YL09 131 aa24.73■■□□□ 1.55
APTX-229ENST00000489583 WNT10BO00744 389 aa24.73■■□□□ 1.55
APTX-229ENST00000489583 IFIT5Q13325 482 aaKnown RBP24.73■■□□□ 1.55
APTX-229ENST00000489583 TAF7LQ5H9L4 462 aa24.73■■□□□ 1.55
APTX-229ENST00000489583 PSME4Q14997 1843 aa24.72■■□□□ 1.55
APTX-229ENST00000489583 WTIPA6NIX2 430 aaPredicted RBP24.72■■□□□ 1.55
APTX-229ENST00000489583 ANP32CO43423 234 aa24.72■■□□□ 1.55
APTX-229ENST00000489583 GTF2IP78347 998 aa24.72■■□□□ 1.55
APTX-229ENST00000489583 KIAA0825Q8IV33 1275 aa24.72■■□□□ 1.55
APTX-229ENST00000489583 MXD3Q9BW11 206 aa24.72■■□□□ 1.55
APTX-229ENST00000489583 SCAF8Q9UPN6 1271 aaKnown RBP24.72■■□□□ 1.55
APTX-229ENST00000489583 SALL2Q9Y467 1007 aaPredicted RBP24.72■■□□□ 1.55
APTX-229ENST00000489583 AKAP11Q9UKA4 1901 aa24.72■■□□□ 1.55
APTX-229ENST00000489583 CHRNDQ07001 517 aa24.71■■□□□ 1.55
APTX-229ENST00000489583 SREBF2Q12772 1141 aa24.71■■□□□ 1.55
APTX-229ENST00000489583 PRAMEF18Q5VWM3 479 aa24.71■■□□□ 1.55
APTX-229ENST00000489583 CTU1Q7Z7A3 348 aaKnown RBP24.71■■□□□ 1.55
APTX-229ENST00000489583 WDR63Q8IWG1 891 aa24.71■■□□□ 1.55
APTX-229ENST00000489583 SPEF2Q9C093 1822 aa24.7■■□□□ 1.55
APTX-229ENST00000489583 FANCIQ9NVI1 1328 aa24.7■■□□□ 1.54
APTX-229ENST00000489583 ZNF316A6NFI3 1004 aaPredicted RBP24.7■■□□□ 1.54
APTX-229ENST00000489583 MYO1BO43795 1136 aa24.7■■□□□ 1.54
APTX-229ENST00000489583 SASH1O94885 1247 aa24.7■■□□□ 1.54
APTX-229ENST00000489583 CSF1RP07333 972 aa24.7■■□□□ 1.54
APTX-229ENST00000489583 DLGAP5Q15398 846 aa24.7■■□□□ 1.54
APTX-229ENST00000489583 ZNF804AQ7Z570 1209 aa24.7■■□□□ 1.54
APTX-229ENST00000489583 TXNRD3Q86VQ6 643 aa24.69■■□□□ 1.54
APTX-229ENST00000489583 CCDC57Q2TAC2 916 aa24.68■■□□□ 1.54
APTX-229ENST00000489583 CCDC184Q52MB2 194 aa24.68■■□□□ 1.54
APTX-229ENST00000489583 MOB2Q70IA6 237 aa24.68■■□□□ 1.54
APTX-229ENST00000489583 PRKG1Q13976 671 aa24.67■■□□□ 1.54
APTX-229ENST00000489583 PKN2Q16513 984 aaKnown RBP24.67■■□□□ 1.54
APTX-229ENST00000489583 CD209Q9NNX6 404 aa24.67■■□□□ 1.54
APTX-229ENST00000489583 C9orf78Q9NZ63 289 aaPredicted RBP24.66■■□□□ 1.54
APTX-229ENST00000489583 VAMP4O75379 141 aa24.65■■□□□ 1.54
APTX-229ENST00000489583 EXOSC9Q06265 439 aaKnown RBP24.65■■□□□ 1.54
APTX-229ENST00000489583 MKRN3Q13064 507 aaKnown RBP24.65■■□□□ 1.54
APTX-229ENST00000489583 CNNM1Q9NRU3 951 aa24.65■■□□□ 1.54
APTX-229ENST00000489583 PPP1R12BO60237 982 aaPredicted RBP24.64■■□□□ 1.54
APTX-229ENST00000489583 TAF5LO75529 589 aa24.64■■□□□ 1.54
APTX-229ENST00000489583 KLRK1P26718 216 aa24.64■■□□□ 1.54
APTX-229ENST00000489583 CASP7P55210 303 aa24.64■■□□□ 1.54
APTX-229ENST00000489583 HELBQ8NG08 1087 aaPredicted RBP24.64■■□□□ 1.54
APTX-229ENST00000489583 ANGEL1Q9UNK9 670 aaKnown RBP24.64■■□□□ 1.54
APTX-229ENST00000489583 PLIN1O60240 522 aa24.63■■□□□ 1.53
APTX-229ENST00000489583 TBC1D8O95759 1140 aa24.63■■□□□ 1.53
APTX-229ENST00000489583 TM4SF4P48230 202 aa24.63■■□□□ 1.53
APTX-229ENST00000489583 RBM5P52756 815 aaKnown RBP eCLIP24.63■■□□□ 1.53
APTX-229ENST00000489583 LDHAL6AQ6ZMR3 332 aa24.63■■□□□ 1.53
APTX-229ENST00000489583 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.63■■□□□ 1.53
APTX-229ENST00000489583 F8W031 263 aaPredicted RBP24.62■■□□□ 1.53
APTX-229ENST00000489583 ALDH1A1P00352 501 aa24.62■■□□□ 1.53
APTX-229ENST00000489583 SUPT20HL1Q3ZLR7 823 aa24.62■■□□□ 1.53
APTX-229ENST00000489583 LMBR1LQ6UX01 489 aa24.62■■□□□ 1.53
APTX-229ENST00000489583 SLC10A4Q96EP9 437 aa24.62■■□□□ 1.53
APTX-229ENST00000489583 DEFB129Q9H1M3 183 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms