RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 PUS3Q9BZE2 481 aaKnown RBP16.73■□□□□ 0.27
CCL28-202ENST00000489442 TNNQ9UQP3 1299 aa16.73■□□□□ 0.27
CCL28-202ENST00000489442 LRRFIP2Q9Y608 721 aaKnown RBP16.73■□□□□ 0.27
CCL28-202ENST00000489442 MROH5Q6ZUA9 1318 aa16.73■□□□□ 0.27
CCL28-202ENST00000489442 PSME4Q14997 1843 aa16.73■□□□□ 0.27
CCL28-202ENST00000489442 SNAP23O00161 211 aa16.72■□□□□ 0.27
CCL28-202ENST00000489442 VIL1P09327 827 aaKnown RBP16.72■□□□□ 0.27
CCL28-202ENST00000489442 TXNRD3Q86VQ6 643 aa16.72■□□□□ 0.27
CCL28-202ENST00000489442 KLRK1P26718 216 aa16.71■□□□□ 0.27
CCL28-202ENST00000489442 METTL24Q5JXM2 366 aa16.71■□□□□ 0.27
CCL28-202ENST00000489442 MAP1SQ66K74 1059 aaPredicted RBP16.71■□□□□ 0.27
CCL28-202ENST00000489442 CNTROBQ8N137 903 aa16.71■□□□□ 0.27
CCL28-202ENST00000489442 KLHDC4Q8TBB5 520 aa16.71■□□□□ 0.27
CCL28-202ENST00000489442 RIPOR2Q9Y4F9 1068 aa16.71■□□□□ 0.27
CCL28-202ENST00000489442 LRRC24Q50LG9 513 aa16.7■□□□□ 0.26
CCL28-202ENST00000489442 RSBN1LQ6PCB5 846 aaPredicted RBP16.7■□□□□ 0.26
CCL28-202ENST00000489442 ZNF804AQ7Z570 1209 aa16.7■□□□□ 0.26
CCL28-202ENST00000489442 DZIP1LQ8IYY4 767 aaKnown RBP16.7■□□□□ 0.26
CCL28-202ENST00000489442 TMEM57Q8N5G2 664 aa16.7■□□□□ 0.26
CCL28-202ENST00000489442 SHTN1A0MZ66 631 aa16.7■□□□□ 0.26
CCL28-202ENST00000489442 UBE4AQ14139 1066 aa16.7■□□□□ 0.26
CCL28-202ENST00000489442 RBM26Q5T8P6 1007 aaKnown RBP16.7■□□□□ 0.26
CCL28-202ENST00000489442 TTLL5Q6EMB2 1281 aa16.7■□□□□ 0.26
CCL28-202ENST00000489442 AGBL3Q8NEM8 1001 aa16.7■□□□□ 0.26
CCL28-202ENST00000489442 CD209Q9NNX6 404 aa16.7■□□□□ 0.26
CCL28-202ENST00000489442 GNAI2P04899 355 aa16.69■□□□□ 0.26
CCL28-202ENST00000489442 TBC1D10BQ4KMP7 808 aaPredicted RBP16.69■□□□□ 0.26
CCL28-202ENST00000489442 STRIP1Q5VSL9 837 aa16.69■□□□□ 0.26
CCL28-202ENST00000489442 C15orf52Q6ZUT6 534 aaKnown RBP16.69■□□□□ 0.26
CCL28-202ENST00000489442 SAMD7Q7Z3H4 446 aa16.69■□□□□ 0.26
CCL28-202ENST00000489442 ITPRIPQ8IWB1 547 aa16.69■□□□□ 0.26
CCL28-202ENST00000489442 ADAMTSL1Q8N6G6 1762 aa16.69■□□□□ 0.26
CCL28-202ENST00000489442 SIL1Q9H173 461 aa16.69■□□□□ 0.26
CCL28-202ENST00000489442 EYA2O00167 538 aa16.68■□□□□ 0.26
CCL28-202ENST00000489442 RFX5P48382 616 aaPredicted RBP16.68■□□□□ 0.26
CCL28-202ENST00000489442 GTF2IP78347 998 aa16.68■□□□□ 0.26
CCL28-202ENST00000489442 HTRA3P83110 453 aa16.68■□□□□ 0.26
CCL28-202ENST00000489442 PTPN12Q05209 780 aaKnown RBP16.68■□□□□ 0.26
CCL28-202ENST00000489442 VPS37DQ86XT2 251 aa16.68■□□□□ 0.26
CCL28-202ENST00000489442 TRPM4Q8TD43 1214 aa16.68■□□□□ 0.26
CCL28-202ENST00000489442 POLR2AP24928 1970 aaKnown RBP16.67■□□□□ 0.26
CCL28-202ENST00000489442 MYO3BQ8WXR4 1341 aa16.67■□□□□ 0.26
CCL28-202ENST00000489442 SRGAP3O43295 1099 aa16.67■□□□□ 0.26
CCL28-202ENST00000489442 PDE8BO95263 885 aa16.67■□□□□ 0.26
CCL28-202ENST00000489442 ITGBL1O95965 494 aaPredicted RBP16.67■□□□□ 0.26
CCL28-202ENST00000489442 USP17L8P0C7I0 530 aa16.67■□□□□ 0.26
CCL28-202ENST00000489442 MS4A1P11836 297 aa16.67■□□□□ 0.26
CCL28-202ENST00000489442 OGFOD1Q8N543 542 aa16.67■□□□□ 0.26
CCL28-202ENST00000489442 ZC3H15Q8WU90 426 aaKnown RBP16.67■□□□□ 0.26
CCL28-202ENST00000489442 RCAN3Q9UKA8 241 aa16.67■□□□□ 0.26
CCL28-202ENST00000489442 HIBADHP31937 336 aaKnown RBP16.66■□□□□ 0.26
CCL28-202ENST00000489442 GYG1P46976 350 aa16.66■□□□□ 0.26
CCL28-202ENST00000489442 HIRAP54198 1017 aaPredicted RBP16.66■□□□□ 0.26
CCL28-202ENST00000489442 KIF4BQ2VIQ3 1234 aa16.66■□□□□ 0.26
CCL28-202ENST00000489442 CAVIN4Q5BKX8 364 aa16.66■□□□□ 0.26
CCL28-202ENST00000489442 DACT2Q5SW24 774 aa16.66■□□□□ 0.26
CCL28-202ENST00000489442 YTHDC1Q96MU7 727 aaKnown RBP16.66■□□□□ 0.26
CCL28-202ENST00000489442 MXD3Q9BW11 206 aa16.66■□□□□ 0.26
CCL28-202ENST00000489442 CEP126Q9P2H0 1117 aa16.66■□□□□ 0.26
CCL28-202ENST00000489442 FBXO3Q9UK99 471 aa16.66■□□□□ 0.26
CCL28-202ENST00000489442 PASKQ96RG2 1323 aa16.65■□□□□ 0.26
CCL28-202ENST00000489442 IRS2Q9Y4H2 1338 aa16.65■□□□□ 0.26
CCL28-202ENST00000489442 FRAT2O75474 233 aaPredicted RBP16.65■□□□□ 0.26
CCL28-202ENST00000489442 IFIT1P09914 478 aaKnown RBP16.65■□□□□ 0.26
CCL28-202ENST00000489442 IL1R1P14778 569 aa16.65■□□□□ 0.26
CCL28-202ENST00000489442 PUM3Q15397 648 aaKnown RBP16.65■□□□□ 0.26
CCL28-202ENST00000489442 GMLQ99445 158 aa16.65■□□□□ 0.26
CCL28-202ENST00000489442 PA2G4Q9UQ80 394 aaKnown RBP16.65■□□□□ 0.26
CCL28-202ENST00000489442 CIAO1O76071 339 aa16.64■□□□□ 0.25
CCL28-202ENST00000489442 RLBP1P12271 317 aa16.64■□□□□ 0.25
CCL28-202ENST00000489442 DCPSQ96C86 337 aaKnown RBP16.64■□□□□ 0.25
CCL28-202ENST00000489442 FAM84BQ96KN1 310 aaPredicted RBP16.64■□□□□ 0.25
CCL28-202ENST00000489442 MYOZ2Q9NPC6 264 aa16.64■□□□□ 0.25
CCL28-202ENST00000489442 CREBZFQ9NS37 354 aa16.64■□□□□ 0.25
CCL28-202ENST00000489442 HDAC9Q9UKV0 1011 aa16.64■□□□□ 0.25
CCL28-202ENST00000489442 TRPM7Q96QT4 1865 aa16.63■□□□□ 0.25
CCL28-202ENST00000489442 TMEM88BA6NKF7 163 aa16.63■□□□□ 0.25
CCL28-202ENST00000489442 SASH1O94885 1247 aa16.63■□□□□ 0.25
CCL28-202ENST00000489442 EGFRP00533 1210 aa16.63■□□□□ 0.25
CCL28-202ENST00000489442 SLC5A1P13866 664 aa16.63■□□□□ 0.25
CCL28-202ENST00000489442 IL15P40933 162 aaPredicted RBP16.63■□□□□ 0.25
CCL28-202ENST00000489442 ZNF280AP59817 542 aaPredicted RBP16.63■□□□□ 0.25
CCL28-202ENST00000489442 CDC37L1Q7L3B6 337 aa16.63■□□□□ 0.25
CCL28-202ENST00000489442 ATG9AQ7Z3C6 839 aa16.63■□□□□ 0.25
CCL28-202ENST00000489442 KIAA0825Q8IV33 1275 aa16.63■□□□□ 0.25
CCL28-202ENST00000489442 VGLL2Q8N8G2 317 aa16.63■□□□□ 0.25
CCL28-202ENST00000489442 PANK1Q8TE04 598 aa16.63■□□□□ 0.25
CCL28-202ENST00000489442 COPRSQ9NQ92 184 aa16.63■□□□□ 0.25
CCL28-202ENST00000489442 PGAP2Q9UHJ9 254 aa16.63■□□□□ 0.25
CCL28-202ENST00000489442 ZNF609O15014 1411 aa16.63■□□□□ 0.25
CCL28-202ENST00000489442 MMP14P50281 582 aa16.62■□□□□ 0.25
CCL28-202ENST00000489442 MTX1Q13505 466 aa16.62■□□□□ 0.25
CCL28-202ENST00000489442 GLIS2Q9BZE0 524 aaPredicted RBP16.62■□□□□ 0.25
CCL28-202ENST00000489442 JAG2Q9Y219 1238 aa16.62■□□□□ 0.25
CCL28-202ENST00000489442 TRAF5O00463 557 aa16.61■□□□□ 0.25
CCL28-202ENST00000489442 SCARF1Q14162 830 aa16.61■□□□□ 0.25
CCL28-202ENST00000489442 DNAJC5GQ8N7S2 189 aa16.61■□□□□ 0.25
CCL28-202ENST00000489442 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.61■□□□□ 0.25
CCL28-202ENST00000489442 TDRD7Q8NHU6 1098 aaKnown RBP16.61■□□□□ 0.25
CCL28-202ENST00000489442 LPIN2Q92539 896 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms