RNA–Protein interactions for RNA: ENST00000489421.1

SCMH1-216, Transcript of Scm polycomb group protein homolog 1, humanhuman

TSL 3

Gene SCMH1, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1-216ENST00000489421 DLEC1Q9Y238 1755 aa9.18□□□□□ -0.94
SCMH1-216ENST00000489421 ARFGEF1Q9Y6D6 1849 aa9.18□□□□□ -0.94
SCMH1-216ENST00000489421 BCORQ6W2J9 1755 aa9.17□□□□□ -0.94
SCMH1-216ENST00000489421 AXIN1O15169 862 aa9.17□□□□□ -0.94
SCMH1-216ENST00000489421 LILRB3O75022 631 aa9.17□□□□□ -0.94
SCMH1-216ENST00000489421 F12P00748 615 aaPredicted RBP9.17□□□□□ -0.94
SCMH1-216ENST00000489421 CTC1Q2NKJ3 1217 aa9.17□□□□□ -0.94
SCMH1-216ENST00000489421 ALDH1L2Q3SY69 923 aa9.17□□□□□ -0.94
SCMH1-216ENST00000489421 MPRIPQ6WCQ1 1025 aa9.17□□□□□ -0.94
SCMH1-216ENST00000489421 SMIM5Q71RC9 77 aa9.17□□□□□ -0.94
SCMH1-216ENST00000489421 TSPYL6Q8N831 410 aa9.17□□□□□ -0.94
SCMH1-216ENST00000489421 C8orf58Q8NAV2 365 aa9.17□□□□□ -0.94
SCMH1-216ENST00000489421 PIGBQ92521 554 aa9.17□□□□□ -0.94
SCMH1-216ENST00000489421 HPS1Q92902 700 aa9.17□□□□□ -0.94
SCMH1-216ENST00000489421 MAP10Q9P2G4 905 aa9.17□□□□□ -0.94
SCMH1-216ENST00000489421 TSPYL4Q9UJ04 414 aa9.17□□□□□ -0.94
SCMH1-216ENST00000489421 LAMB4A4D0S4 1761 aa9.17□□□□□ -0.94
SCMH1-216ENST00000489421 KCPQ6ZWJ8 1503 aa9.16□□□□□ -0.94
SCMH1-216ENST00000489421 SOS1Q07889 1333 aaPredicted RBP9.16□□□□□ -0.94
SCMH1-216ENST00000489421 HSP90AB1P08238 724 aaKnown RBP9.16□□□□□ -0.94
SCMH1-216ENST00000489421 CLK2P49760 499 aaKnown RBP9.16□□□□□ -0.94
SCMH1-216ENST00000489421 SLC27A3Q5K4L6 730 aa9.16□□□□□ -0.94
SCMH1-216ENST00000489421 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.16□□□□□ -0.94
SCMH1-216ENST00000489421 EHBP1Q8NDI1 1231 aa9.16□□□□□ -0.94
SCMH1-216ENST00000489421 SSH1Q8WYL5 1049 aa9.16□□□□□ -0.94
SCMH1-216ENST00000489421 DCAF5Q96JK2 942 aa9.16□□□□□ -0.94
SCMH1-216ENST00000489421 MTFR1LQ9H019 292 aa9.16□□□□□ -0.94
SCMH1-216ENST00000489421 MIS18AQ9NYP9 233 aa9.16□□□□□ -0.94
SCMH1-216ENST00000489421 CCNL1Q9UK58 526 aaPredicted RBP9.16□□□□□ -0.94
SCMH1-216ENST00000489421 SBF1O95248 1867 aa9.16□□□□□ -0.94
SCMH1-216ENST00000489421 ANKRD31Q8N7Z5 1873 aa9.16□□□□□ -0.94
SCMH1-216ENST00000489421 KDM3BQ7LBC6 1761 aa9.16□□□□□ -0.94
SCMH1-216ENST00000489421 NRXN2Q9P2S2 1712 aa9.16□□□□□ -0.94
SCMH1-216ENST00000489421 SCN7AQ01118 1682 aa9.16□□□□□ -0.94
SCMH1-216ENST00000489421 PLIN1O60240 522 aa9.15□□□□□ -0.94
SCMH1-216ENST00000489421 ALDH1A1P00352 501 aa9.15□□□□□ -0.94
SCMH1-216ENST00000489421 IRX6P78412 446 aaPredicted RBP9.15□□□□□ -0.94
SCMH1-216ENST00000489421 TEFQ10587 303 aa9.15□□□□□ -0.94
SCMH1-216ENST00000489421 PDE3AQ14432 1141 aa9.15□□□□□ -0.94
SCMH1-216ENST00000489421 TWISTNBQ3B726 338 aaPredicted RBP9.15□□□□□ -0.94
SCMH1-216ENST00000489421 RTL5Q5HYW3 569 aaPredicted RBP9.15□□□□□ -0.94
SCMH1-216ENST00000489421 ZNF511Q8NB15 262 aa9.15□□□□□ -0.94
SCMH1-216ENST00000489421 SLC4A9Q96Q91 983 aa9.15□□□□□ -0.94
SCMH1-216ENST00000489421 FHDC1Q9C0D6 1143 aaPredicted RBP9.15□□□□□ -0.94
SCMH1-216ENST00000489421 KDM4CQ9H3R0 1056 aa9.15□□□□□ -0.94
SCMH1-216ENST00000489421 POLR3EQ9NVU0 708 aa9.15□□□□□ -0.94
SCMH1-216ENST00000489421 ASAP1Q9ULH1 1129 aa9.15□□□□□ -0.94
SCMH1-216ENST00000489421 CTHP32929 405 aa9.14□□□□□ -0.95
SCMH1-216ENST00000489421 ITPK1Q13572 414 aa9.14□□□□□ -0.95
SCMH1-216ENST00000489421 COL23A1Q86Y22 540 aaPredicted RBP9.14□□□□□ -0.95
SCMH1-216ENST00000489421 LINC00116Q8NCU8 138 aa9.14□□□□□ -0.95
SCMH1-216ENST00000489421 ZNF775Q96BV0 537 aaPredicted RBP9.14□□□□□ -0.95
SCMH1-216ENST00000489421 SLC52A2Q9HAB3 445 aa9.14□□□□□ -0.95
SCMH1-216ENST00000489421 BTBD11A6QL63 1104 aa9.13□□□□□ -0.95
SCMH1-216ENST00000489421 ERVV-2B6SEH9 535 aa9.13□□□□□ -0.95
SCMH1-216ENST00000489421 ELL2O00472 640 aaPredicted RBP9.13□□□□□ -0.95
SCMH1-216ENST00000489421 EIF4A1P60842 406 aaKnown RBP9.13□□□□□ -0.95
SCMH1-216ENST00000489421 KRT24Q2M2I5 525 aa9.13□□□□□ -0.95
SCMH1-216ENST00000489421 C20orf194Q5TEA3 1177 aa9.13□□□□□ -0.95
SCMH1-216ENST00000489421 FAM117AQ9C073 453 aa9.13□□□□□ -0.95
SCMH1-216ENST00000489421 ATG3Q9NT62 314 aa9.13□□□□□ -0.95
SCMH1-216ENST00000489421 SMC4Q9NTJ3 1288 aa9.13□□□□□ -0.95
SCMH1-216ENST00000489421 GMPR2Q9P2T1 348 aaKnown RBP9.13□□□□□ -0.95
SCMH1-216ENST00000489421 PPP1R1BQ9UD71 204 aaPredicted RBP9.13□□□□□ -0.95
SCMH1-216ENST00000489421 HEG1Q9ULI3 1381 aa9.12□□□□□ -0.95
SCMH1-216ENST00000489421 COL11A2P13942 1736 aaPredicted RBP9.12□□□□□ -0.95
SCMH1-216ENST00000489421 KCNQ3O43525 872 aa9.12□□□□□ -0.95
SCMH1-216ENST00000489421 HOXB7P09629 217 aa9.12□□□□□ -0.95
SCMH1-216ENST00000489421 TSC1Q92574 1164 aa9.12□□□□□ -0.95
SCMH1-216ENST00000489421 ARHGAP45Q92619 1136 aa9.12□□□□□ -0.95
SCMH1-216ENST00000489421 SYT17Q9BSW7 474 aa9.12□□□□□ -0.95
SCMH1-216ENST00000489421 BCL2L13Q9BXK5 485 aa9.12□□□□□ -0.95
SCMH1-216ENST00000489421 PPP4R2Q9NY27 417 aa9.12□□□□□ -0.95
SCMH1-216ENST00000489421 TLL2Q9Y6L7 1015 aa9.12□□□□□ -0.95
SCMH1-216ENST00000489421 NUP98P52948 1817 aa9.11□□□□□ -0.95
SCMH1-216ENST00000489421 IPO8O15397 1037 aaKnown RBP9.11□□□□□ -0.95
SCMH1-216ENST00000489421 ZKSCAN2Q63HK3 967 aa9.11□□□□□ -0.95
SCMH1-216ENST00000489421 MSL1Q68DK7 614 aa9.11□□□□□ -0.95
SCMH1-216ENST00000489421 NFATC2IPQ8NCF5 419 aa9.11□□□□□ -0.95
SCMH1-216ENST00000489421 EXOC6Q8TAG9 804 aa9.11□□□□□ -0.95
SCMH1-216ENST00000489421 TFCP2L1Q9NZI6 479 aa9.11□□□□□ -0.95
SCMH1-216ENST00000489421 NOB1Q9ULX3 412 aaKnown RBP9.11□□□□□ -0.95
SCMH1-216ENST00000489421 ARFGEF2Q9Y6D5 1785 aa9.11□□□□□ -0.95
SCMH1-216ENST00000489421 KIF16BQ96L93 1317 aa9.1□□□□□ -0.95
SCMH1-216ENST00000489421 LOC102724428A0A0B4J2F2 783 aa9.1□□□□□ -0.95
SCMH1-216ENST00000489421 SIK1P57059 783 aa9.1□□□□□ -0.95
SCMH1-216ENST00000489421 ZNF790Q6PG37 636 aa9.1□□□□□ -0.95
SCMH1-216ENST00000489421 ATF7IPQ6VMQ6 1270 aa9.1□□□□□ -0.95
SCMH1-216ENST00000489421 NLGN2Q8NFZ4 835 aa9.1□□□□□ -0.95
SCMH1-216ENST00000489421 FRAT1Q92837 279 aaPredicted RBP9.1□□□□□ -0.95
SCMH1-216ENST00000489421 ARXQ96QS3 562 aa9.1□□□□□ -0.95
SCMH1-216ENST00000489421 CRBNQ96SW2 442 aa9.1□□□□□ -0.95
SCMH1-216ENST00000489421 CHMP4AQ9BY43 222 aa9.1□□□□□ -0.95
SCMH1-216ENST00000489421 TMOD3Q9NYL9 352 aa9.1□□□□□ -0.95
SCMH1-216ENST00000489421 GIGYF1O75420 1035 aaPredicted RBP9.09□□□□□ -0.95
SCMH1-216ENST00000489421 RLBP1P12271 317 aa9.09□□□□□ -0.95
SCMH1-216ENST00000489421 TRIM27P14373 513 aa9.09□□□□□ -0.95
SCMH1-216ENST00000489421 CABP4P57796 275 aa9.09□□□□□ -0.95
SCMH1-216ENST00000489421 CCDC30Q5VVM6 783 aa9.09□□□□□ -0.95
SCMH1-216ENST00000489421 SLC16A10Q8TF71 515 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms