RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 MFAP1P55081 439 aaKnown RBP25.35■■□□□ 1.65
SND1-214ENST00000489417 SP8Q8IXZ3 490 aa25.35■■□□□ 1.65
SND1-214ENST00000489417 FSD1Q9BTV5 496 aa25.35■■□□□ 1.65
SND1-214ENST00000489417 PAG1Q9NWQ8 432 aa25.35■■□□□ 1.65
SND1-214ENST00000489417 RBM19Q9Y4C8 960 aaKnown RBP25.35■■□□□ 1.65
SND1-214ENST00000489417 PSDA5PKW4 1024 aaPredicted RBP25.34■■□□□ 1.65
SND1-214ENST00000489417 WTIPA6NIX2 430 aaPredicted RBP25.34■■□□□ 1.65
SND1-214ENST00000489417 GPSM2P81274 684 aa25.34■■□□□ 1.65
SND1-214ENST00000489417 SCARF1Q14162 830 aa25.34■■□□□ 1.65
SND1-214ENST00000489417 UPF2Q9HAU5 1272 aaKnown RBP25.34■■□□□ 1.65
SND1-214ENST00000489417 ATP6V0A2Q9Y487 856 aa25.34■■□□□ 1.65
SND1-214ENST00000489417 GOLIM4O00461 696 aa25.33■■□□□ 1.65
SND1-214ENST00000489417 CHRNA5P30532 468 aa25.33■■□□□ 1.65
SND1-214ENST00000489417 BCAMP50895 628 aa25.33■■□□□ 1.65
SND1-214ENST00000489417 RFX7Q2KHR2 1363 aa25.32■■□□□ 1.64
SND1-214ENST00000489417 MCAMP43121 646 aa25.32■■□□□ 1.64
SND1-214ENST00000489417 CAVIN4Q5BKX8 364 aa25.32■■□□□ 1.64
SND1-214ENST00000489417 SNRKQ9NRH2 765 aa25.32■■□□□ 1.64
SND1-214ENST00000489417 HIP1O00291 1037 aa25.31■■□□□ 1.64
SND1-214ENST00000489417 ATP2B4P23634 1241 aa25.31■■□□□ 1.64
SND1-214ENST00000489417 FKBP4Q02790 459 aaKnown RBP eCLIP25.31■■□□□ 1.64
SND1-214ENST00000489417 KBTBD3Q8NAB2 608 aa25.31■■□□□ 1.64
SND1-214ENST00000489417 CNKSR1Q969H4 720 aa25.31■■□□□ 1.64
SND1-214ENST00000489417 ESYT1Q9BSJ8 1104 aa25.31■■□□□ 1.64
SND1-214ENST00000489417 DIAPH3Q9NSV4 1193 aa25.31■■□□□ 1.64
SND1-214ENST00000489417 PODXL2Q9NZ53 605 aa25.31■■□□□ 1.64
SND1-214ENST00000489417 ZAP70P43403 619 aa25.3■■□□□ 1.64
SND1-214ENST00000489417 GYG1P46976 350 aa25.3■■□□□ 1.64
SND1-214ENST00000489417 GNL3LQ9NVN8 582 aaKnown RBP25.3■■□□□ 1.64
SND1-214ENST00000489417 NSFL1CQ9UNZ2 370 aaKnown RBP25.3■■□□□ 1.64
SND1-214ENST00000489417 IRS2Q9Y4H2 1338 aa25.3■■□□□ 1.64
SND1-214ENST00000489417 KLRK1P26718 216 aa25.29■■□□□ 1.64
SND1-214ENST00000489417 PI16Q6UXB8 463 aa25.29■■□□□ 1.64
SND1-214ENST00000489417 FBXO33Q7Z6M2 555 aa25.29■■□□□ 1.64
SND1-214ENST00000489417 FAM84BQ96KN1 310 aaPredicted RBP25.29■■□□□ 1.64
SND1-214ENST00000489417 GGA1Q9UJY5 639 aa25.29■■□□□ 1.64
SND1-214ENST00000489417 KIF13BQ9NQT8 1826 aa25.29■■□□□ 1.64
SND1-214ENST00000489417 UFL1O94874 794 aa25.29■■□□□ 1.64
SND1-214ENST00000489417 PRPF40BQ6NWY9 871 aaKnown RBP25.29■■□□□ 1.64
SND1-214ENST00000489417 TICAM2Q86XR7 235 aa25.29■■□□□ 1.64
SND1-214ENST00000489417 ANTXR1Q9H6X2 564 aa25.29■■□□□ 1.64
SND1-214ENST00000489417 HMG20BQ9P0W2 317 aa25.29■■□□□ 1.64
SND1-214ENST00000489417 LTBP1Q14766 1721 aa25.28■■□□□ 1.64
SND1-214ENST00000489417 AKAP11Q9UKA4 1901 aa25.28■■□□□ 1.64
SND1-214ENST00000489417 DLEC1Q9Y238 1755 aa25.28■■□□□ 1.64
SND1-214ENST00000489417 RASGRF1Q13972 1273 aa25.28■■□□□ 1.64
SND1-214ENST00000489417 C15orf52Q6ZUT6 534 aaKnown RBP25.28■■□□□ 1.64
SND1-214ENST00000489417 VPS37DQ86XT2 251 aa25.28■■□□□ 1.64
SND1-214ENST00000489417 SPATA5Q8NB90 893 aa25.28■■□□□ 1.64
SND1-214ENST00000489417 RUFY2Q8WXA3 655 aa25.28■■□□□ 1.64
SND1-214ENST00000489417 TMX4Q9H1E5 349 aaPredicted RBP25.28■■□□□ 1.64
SND1-214ENST00000489417 CACNA1SQ13698 1873 aa25.26■■□□□ 1.63
SND1-214ENST00000489417 REC8O95072 547 aa25.26■■□□□ 1.63
SND1-214ENST00000489417 HIBADHP31937 336 aaKnown RBP25.26■■□□□ 1.63
SND1-214ENST00000489417 TTF1Q15361 905 aaPredicted RBP25.26■■□□□ 1.63
SND1-214ENST00000489417 CWC27Q6UX04 472 aaKnown RBP25.26■■□□□ 1.63
SND1-214ENST00000489417 TBC1D16Q8TBP0 767 aa25.26■■□□□ 1.63
SND1-214ENST00000489417 SGIP1Q9BQI5 828 aa25.26■■□□□ 1.63
SND1-214ENST00000489417 SGSM2O43147 1006 aa25.25■■□□□ 1.63
SND1-214ENST00000489417 CYP2E1P05181 493 aaPredicted RBP25.25■■□□□ 1.63
SND1-214ENST00000489417 NMIQ13287 307 aaPredicted RBP25.25■■□□□ 1.63
SND1-214ENST00000489417 TXNRD3Q86VQ6 643 aa25.25■■□□□ 1.63
SND1-214ENST00000489417 SEMA3EO15041 775 aa25.24■■□□□ 1.63
SND1-214ENST00000489417 DPEP1P16444 411 aa25.24■■□□□ 1.63
SND1-214ENST00000489417 MPNDQ8N594 471 aa25.24■■□□□ 1.63
SND1-214ENST00000489417 TBC1D32Q96NH3 1257 aa25.24■■□□□ 1.63
SND1-214ENST00000489417 POLLQ9UGP5 575 aa25.24■■□□□ 1.63
SND1-214ENST00000489417 RAD50Q92878 1312 aa25.24■■□□□ 1.63
SND1-214ENST00000489417 LRRFIP1Q32MZ4 808 aaKnown RBP25.23■■□□□ 1.63
SND1-214ENST00000489417 OLFM4Q6UX06 510 aa25.23■■□□□ 1.63
SND1-214ENST00000489417 FAM227BQ96M60 508 aa25.23■■□□□ 1.63
SND1-214ENST00000489417 GPR101Q96P66 508 aaPredicted RBP25.23■■□□□ 1.63
SND1-214ENST00000489417 C22orf23Q9BZE7 217 aa25.23■■□□□ 1.63
SND1-214ENST00000489417 DENND2AQ9ULE3 1009 aa25.23■■□□□ 1.63
SND1-214ENST00000489417 IQSEC3Q9UPP2 1182 aaPredicted RBP25.23■■□□□ 1.63
SND1-214ENST00000489417 SLX4Q8IY92 1834 aa25.23■■□□□ 1.63
SND1-214ENST00000489417 C6orf229H3BNL8 230 aa25.22■■□□□ 1.63
SND1-214ENST00000489417 ZBTB22O15209 634 aa25.22■■□□□ 1.63
SND1-214ENST00000489417 TGFB2P61812 414 aa25.22■■□□□ 1.63
SND1-214ENST00000489417 DPP8Q6V1X1 898 aaPredicted RBP25.22■■□□□ 1.63
SND1-214ENST00000489417 ZNF804AQ7Z570 1209 aa25.22■■□□□ 1.63
SND1-214ENST00000489417 IL25Q9H293 177 aa25.22■■□□□ 1.63
SND1-214ENST00000489417 PIH1D3Q9NQM4 214 aaKnown RBP25.22■■□□□ 1.63
SND1-214ENST00000489417 MED23Q9ULK4 1368 aa25.22■■□□□ 1.63
SND1-214ENST00000489417 DUOX1Q9NRD9 1551 aa25.22■■□□□ 1.63
SND1-214ENST00000489417 A0A0D9SFI3 127 aa25.21■■□□□ 1.63
SND1-214ENST00000489417 A0A0G2JLW4 131 aa25.21■■□□□ 1.63
SND1-214ENST00000489417 RNF113AO15541 343 aaKnown RBP25.21■■□□□ 1.63
SND1-214ENST00000489417 PTGER2P43116 358 aa25.21■■□□□ 1.63
SND1-214ENST00000489417 COL1A1P02452 1464 aaPredicted RBP25.21■■□□□ 1.63
SND1-214ENST00000489417 KIAA1551Q9HCM1 1747 aa25.21■■□□□ 1.63
SND1-214ENST00000489417 ZFYP08048 801 aaPredicted RBP25.2■■□□□ 1.63
SND1-214ENST00000489417 KCNA3P22001 575 aa25.2■■□□□ 1.63
SND1-214ENST00000489417 TTLL6Q8N841 843 aa25.2■■□□□ 1.63
SND1-214ENST00000489417 USP26Q9BXU7 913 aa25.2■■□□□ 1.63
SND1-214ENST00000489417 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.2■■□□□ 1.63
SND1-214ENST00000489417 PDS5AQ29RF7 1337 aaKnown RBP25.2■■□□□ 1.62
SND1-214ENST00000489417 FRAT2O75474 233 aaPredicted RBP25.2■■□□□ 1.62
SND1-214ENST00000489417 CC2D2BQ6DHV5 1058 aa25.2■■□□□ 1.62
SND1-214ENST00000489417 ZSCAN25Q6NSZ9 544 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms