RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 MINPP1Q9UNW1 487 aa17.03■□□□□ 0.32
LMO4-203ENST00000489303 FOXO4P98177 505 aa17.02■□□□□ 0.32
LMO4-203ENST00000489303 LMBR1LQ6UX01 489 aa17.02■□□□□ 0.32
LMO4-203ENST00000489303 SAPCD2Q86UD0 394 aa17.02■□□□□ 0.32
LMO4-203ENST00000489303 ZIC5Q96T25 663 aa17.02■□□□□ 0.32
LMO4-203ENST00000489303 ASTN2O75129 1339 aaPredicted RBP17.01■□□□□ 0.31
LMO4-203ENST00000489303 API5Q9BZZ5 524 aaKnown RBP17.01■□□□□ 0.31
LMO4-203ENST00000489303 LEMD3Q9Y2U8 911 aa17.01■□□□□ 0.31
LMO4-203ENST00000489303 H7C1D1 291 aa17■□□□□ 0.31
LMO4-203ENST00000489303 KCNJ4P48050 445 aa17■□□□□ 0.31
LMO4-203ENST00000489303 CCT4P50991 539 aaKnown RBP17■□□□□ 0.31
LMO4-203ENST00000489303 NOB1Q9ULX3 412 aaKnown RBP17■□□□□ 0.31
LMO4-203ENST00000489303 POLR2AP24928 1970 aaKnown RBP17■□□□□ 0.31
LMO4-203ENST00000489303 ADM5C9JUS6 153 aa16.99■□□□□ 0.31
LMO4-203ENST00000489303 NBPF7P0C2Y1 421 aaPredicted RBP16.99■□□□□ 0.31
LMO4-203ENST00000489303 RARSP54136 660 aaKnown RBP16.99■□□□□ 0.31
LMO4-203ENST00000489303 BRPF1P55201 1214 aaPredicted RBP16.99■□□□□ 0.31
LMO4-203ENST00000489303 MAP2K1Q02750 393 aaPredicted RBP16.99■□□□□ 0.31
LMO4-203ENST00000489303 ZC3H15Q8WU90 426 aaKnown RBP16.99■□□□□ 0.31
LMO4-203ENST00000489303 DPF2Q92785 391 aa16.99■□□□□ 0.31
LMO4-203ENST00000489303 UTYO14607 1347 aa16.98■□□□□ 0.31
LMO4-203ENST00000489303 KIF16BQ96L93 1317 aa16.98■□□□□ 0.31
LMO4-203ENST00000489303 SPEF2Q9C093 1822 aa16.98■□□□□ 0.31
LMO4-203ENST00000489303 MYH3P11055 1940 aa16.98■□□□□ 0.31
LMO4-203ENST00000489303 RPS12P25398 132 aaKnown RBP16.98■□□□□ 0.31
LMO4-203ENST00000489303 EPHA10Q5JZY3 1008 aa16.98■□□□□ 0.31
LMO4-203ENST00000489303 CDC37L1Q7L3B6 337 aa16.98■□□□□ 0.31
LMO4-203ENST00000489303 SUCLG2Q96I99 432 aa16.98■□□□□ 0.31
LMO4-203ENST00000489303 IPO8O15397 1037 aaKnown RBP16.97■□□□□ 0.31
LMO4-203ENST00000489303 ECE1P42892 770 aa16.97■□□□□ 0.31
LMO4-203ENST00000489303 CHRNDQ07001 517 aa16.97■□□□□ 0.31
LMO4-203ENST00000489303 LDHAL6AQ6ZMR3 332 aa16.97■□□□□ 0.31
LMO4-203ENST00000489303 PODNQ7Z5L7 613 aa16.97■□□□□ 0.31
LMO4-203ENST00000489303 CNNM1Q9NRU3 951 aa16.97■□□□□ 0.31
LMO4-203ENST00000489303 HDAC5Q9UQL6 1122 aa16.97■□□□□ 0.31
LMO4-203ENST00000489303 MED23Q9ULK4 1368 aa16.97■□□□□ 0.31
LMO4-203ENST00000489303 ZNF804BA4D1E1 1349 aa16.96■□□□□ 0.31
LMO4-203ENST00000489303 VIL1P09327 827 aaKnown RBP16.96■□□□□ 0.31
LMO4-203ENST00000489303 ARHGAP45Q92619 1136 aa16.96■□□□□ 0.31
LMO4-203ENST00000489303 SCAF8Q9UPN6 1271 aaKnown RBP16.96■□□□□ 0.31
LMO4-203ENST00000489303 KRT26Q7Z3Y9 468 aa16.95■□□□□ 0.3
LMO4-203ENST00000489303 MXD3Q9BW11 206 aa16.95■□□□□ 0.3
LMO4-203ENST00000489303 COA1Q9GZY4 146 aa16.95■□□□□ 0.3
LMO4-203ENST00000489303 USP44Q9H0E7 712 aa16.95■□□□□ 0.3
LMO4-203ENST00000489303 BICC1Q9H694 974 aaKnown RBP16.95■□□□□ 0.3
LMO4-203ENST00000489303 KIF4BQ2VIQ3 1234 aa16.94■□□□□ 0.3
LMO4-203ENST00000489303 ZNF594Q96JF6 807 aaPredicted RBP16.94■□□□□ 0.3
LMO4-203ENST00000489303 ZBED9Q6R2W3 1325 aa16.94■□□□□ 0.3
LMO4-203ENST00000489303 USP17L3A6NCW0 530 aa16.93■□□□□ 0.3
LMO4-203ENST00000489303 USP17L4A6NCW7 530 aa16.93■□□□□ 0.3
LMO4-203ENST00000489303 UBTFL1P0CB47 393 aaPredicted RBP16.93■□□□□ 0.3
LMO4-203ENST00000489303 MAP2K2P36507 400 aa16.93■□□□□ 0.3
LMO4-203ENST00000489303 HUNKP57058 714 aa16.93■□□□□ 0.3
LMO4-203ENST00000489303 RABL6Q3YEC7 729 aaPredicted RBP16.93■□□□□ 0.3
LMO4-203ENST00000489303 USP17L1Q7RTZ2 530 aa16.93■□□□□ 0.3
LMO4-203ENST00000489303 TXNRD3Q86VQ6 643 aa16.93■□□□□ 0.3
LMO4-203ENST00000489303 AGBL3Q8NEM8 1001 aa16.93■□□□□ 0.3
LMO4-203ENST00000489303 KAZALD1Q96I82 304 aa16.93■□□□□ 0.3
LMO4-203ENST00000489303 GGA3Q9NZ52 723 aa16.93■□□□□ 0.3
LMO4-203ENST00000489303 ZNF646O15015 1829 aaPredicted RBP16.92■□□□□ 0.3
LMO4-203ENST00000489303 PSME4Q14997 1843 aa16.92■□□□□ 0.3
LMO4-203ENST00000489303 PLIN1O60240 522 aa16.92■□□□□ 0.3
LMO4-203ENST00000489303 TAF5LO75529 589 aa16.92■□□□□ 0.3
LMO4-203ENST00000489303 RSBN1LQ6PCB5 846 aaPredicted RBP16.92■□□□□ 0.3
LMO4-203ENST00000489303 HELBQ8NG08 1087 aaPredicted RBP16.92■□□□□ 0.3
LMO4-203ENST00000489303 FRAT1Q92837 279 aaPredicted RBP16.92■□□□□ 0.3
LMO4-203ENST00000489303 FBXW7Q969H0 707 aa16.92■□□□□ 0.3
LMO4-203ENST00000489303 DCPSQ96C86 337 aaKnown RBP16.92■□□□□ 0.3
LMO4-203ENST00000489303 ABHD8Q96I13 439 aa16.92■□□□□ 0.3
LMO4-203ENST00000489303 GMLQ99445 158 aa16.92■□□□□ 0.3
LMO4-203ENST00000489303 FAM155AB1AL88 458 aaPredicted RBP16.91■□□□□ 0.3
LMO4-203ENST00000489303 KLRK1P26718 216 aa16.91■□□□□ 0.3
LMO4-203ENST00000489303 SCARF1Q14162 830 aa16.91■□□□□ 0.3
LMO4-203ENST00000489303 ANKRD44Q8N8A2 993 aa16.91■□□□□ 0.3
LMO4-203ENST00000489303 HHIPL1Q96JK4 782 aa16.91■□□□□ 0.3
LMO4-203ENST00000489303 BEGAINQ9BUH8 593 aa16.91■□□□□ 0.3
LMO4-203ENST00000489303 GBA2Q9HCG7 927 aaPredicted RBP16.91■□□□□ 0.3
LMO4-203ENST00000489303 ZNF280AP59817 542 aaPredicted RBP16.9■□□□□ 0.3
LMO4-203ENST00000489303 ANGEL2Q5VTE6 544 aaKnown RBP16.9■□□□□ 0.3
LMO4-203ENST00000489303 ZNF804AQ7Z570 1209 aa16.9■□□□□ 0.3
LMO4-203ENST00000489303 MROH5Q6ZUA9 1318 aa16.9■□□□□ 0.3
LMO4-203ENST00000489303 CASP8AP2Q9UKL3 1982 aa16.89■□□□□ 0.3
LMO4-203ENST00000489303 SNAP23O00161 211 aa16.89■□□□□ 0.29
LMO4-203ENST00000489303 BCAR3O75815 825 aa16.89■□□□□ 0.29
LMO4-203ENST00000489303 USP17L8P0C7I0 530 aa16.89■□□□□ 0.29
LMO4-203ENST00000489303 STRIP1Q5VSL9 837 aa16.89■□□□□ 0.29
LMO4-203ENST00000489303 PRAMEF18Q5VWM3 479 aa16.89■□□□□ 0.29
LMO4-203ENST00000489303 ATF7IPQ6VMQ6 1270 aa16.89■□□□□ 0.29
LMO4-203ENST00000489303 C15orf52Q6ZUT6 534 aaKnown RBP16.89■□□□□ 0.29
LMO4-203ENST00000489303 CDCA5Q96FF9 252 aa16.89■□□□□ 0.29
LMO4-203ENST00000489303 MYO3BQ8WXR4 1341 aa16.89■□□□□ 0.29
LMO4-203ENST00000489303 GNAI3P08754 354 aa16.88■□□□□ 0.29
LMO4-203ENST00000489303 UBE4AQ14139 1066 aa16.88■□□□□ 0.29
LMO4-203ENST00000489303 METTL24Q5JXM2 366 aa16.88■□□□□ 0.29
LMO4-203ENST00000489303 ZKSCAN2Q63HK3 967 aa16.88■□□□□ 0.29
LMO4-203ENST00000489303 INTS3Q68E01 1043 aaKnown RBP16.88■□□□□ 0.29
LMO4-203ENST00000489303 TTLL5Q6EMB2 1281 aa16.88■□□□□ 0.29
LMO4-203ENST00000489303 RGMBQ6NW40 437 aa16.88■□□□□ 0.29
LMO4-203ENST00000489303 MOB2Q70IA6 237 aa16.88■□□□□ 0.29
LMO4-203ENST00000489303 OGFOD1Q8N543 542 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms