RNA–Protein interactions for RNA: ENST00000489048.1

NEB-215, Transcript of nebulin, humanhuman

TSL 1 (best)

Gene NEB, Length 2,738 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-215ENST00000489048 ZNF274Q96GC6 653 aaPredicted RBP12.84□□□□□ -0.35
NEB-215ENST00000489048 DBNDD2Q9BQY9 259 aa12.84□□□□□ -0.35
NEB-215ENST00000489048 SLC52A2Q9HAB3 445 aa12.84□□□□□ -0.35
NEB-215ENST00000489048 AFDNP55196 1824 aaKnown RBP12.84□□□□□ -0.35
NEB-215ENST00000489048 TRPM3Q9HCF6 1732 aaPredicted RBP12.84□□□□□ -0.35
NEB-215ENST00000489048 SPEF2Q9C093 1822 aa12.84□□□□□ -0.35
NEB-215ENST00000489048 A0A1W2PQ27 194 aa12.84□□□□□ -0.35
NEB-215ENST00000489048 A0A1W2PQ64 194 aa12.84□□□□□ -0.35
NEB-215ENST00000489048 A0A1W2PQD8 194 aa12.84□□□□□ -0.35
NEB-215ENST00000489048 CCDC69A6NI79 296 aa12.84□□□□□ -0.35
NEB-215ENST00000489048 BECN2A8MW95 431 aa12.84□□□□□ -0.35
NEB-215ENST00000489048 SKILP12757 684 aa12.84□□□□□ -0.35
NEB-215ENST00000489048 PTPN14Q15678 1187 aa12.84□□□□□ -0.35
NEB-215ENST00000489048 COPS6Q7L5N1 327 aa12.84□□□□□ -0.35
NEB-215ENST00000489048 CEP57L1Q8IYX8 460 aa12.84□□□□□ -0.35
NEB-215ENST00000489048 CCAR2Q8N163 923 aaKnown RBP12.84□□□□□ -0.35
NEB-215ENST00000489048 FAM53CQ9NYF3 392 aa12.84□□□□□ -0.35
NEB-215ENST00000489048 ARFGEF2Q9Y6D5 1785 aa12.84□□□□□ -0.35
NEB-215ENST00000489048 USP27XA6NNY8 438 aa12.83□□□□□ -0.35
NEB-215ENST00000489048 KCNJ6P48051 423 aa12.83□□□□□ -0.35
NEB-215ENST00000489048 CASP7P55210 303 aa12.83□□□□□ -0.35
NEB-215ENST00000489048 ZNF397Q8NF99 534 aaPredicted RBP12.83□□□□□ -0.35
NEB-215ENST00000489048 ERO1AQ96HE7 468 aa12.83□□□□□ -0.35
NEB-215ENST00000489048 NAT10Q9H0A0 1025 aaKnown RBP12.83□□□□□ -0.35
NEB-215ENST00000489048 GPR108Q9NPR9 543 aa12.83□□□□□ -0.35
NEB-215ENST00000489048 EVCP57679 992 aa12.83□□□□□ -0.36
NEB-215ENST00000489048 ARID5BQ14865 1188 aa12.83□□□□□ -0.36
NEB-215ENST00000489048 ANKRD13DQ6ZTN6 518 aa12.83□□□□□ -0.36
NEB-215ENST00000489048 FMR1NBQ8N0W7 255 aaPredicted RBP12.83□□□□□ -0.36
NEB-215ENST00000489048 KIF18AQ8NI77 898 aa12.83□□□□□ -0.36
NEB-215ENST00000489048 DNAJC2Q99543 621 aaKnown RBP12.83□□□□□ -0.36
NEB-215ENST00000489048 FTOQ9C0B1 505 aaKnown RBP eCLIP12.83□□□□□ -0.36
NEB-215ENST00000489048 RTEL1Q9NZ71 1219 aa12.83□□□□□ -0.36
NEB-215ENST00000489048 DHX8Q14562 1220 aaKnown RBP12.82□□□□□ -0.36
NEB-215ENST00000489048 ZMYM1Q5SVZ6 1142 aa12.82□□□□□ -0.36
NEB-215ENST00000489048 LRRC2Q9BYS8 371 aa12.82□□□□□ -0.36
NEB-215ENST00000489048 CHGBP05060 677 aa12.82□□□□□ -0.36
NEB-215ENST00000489048 APOBRQ0VD83 1088 aa12.82□□□□□ -0.36
NEB-215ENST00000489048 ESCO1Q5FWF5 840 aa12.82□□□□□ -0.36
NEB-215ENST00000489048 ADALQ6DHV7 355 aa12.82□□□□□ -0.36
NEB-215ENST00000489048 FSIP1Q8NA03 581 aa12.82□□□□□ -0.36
NEB-215ENST00000489048 RGS22Q8NE09 1264 aa12.82□□□□□ -0.36
NEB-215ENST00000489048 MRPS27Q92552 414 aaKnown RBP12.82□□□□□ -0.36
NEB-215ENST00000489048 USP16Q9Y5T5 823 aa12.82□□□□□ -0.36
NEB-215ENST00000489048 CARMIL3Q8ND23 1372 aa12.82□□□□□ -0.36
NEB-215ENST00000489048 CEBPZQ03701 1054 aaKnown RBP12.82□□□□□ -0.36
NEB-215ENST00000489048 NAA30Q147X3 362 aaPredicted RBP12.82□□□□□ -0.36
NEB-215ENST00000489048 PPP4R3CPQ6ZMV5 832 aa12.82□□□□□ -0.36
NEB-215ENST00000489048 DDX46Q7L014 1031 aaKnown RBP12.82□□□□□ -0.36
NEB-215ENST00000489048 NBPF11Q86T75 865 aa12.82□□□□□ -0.36
NEB-215ENST00000489048 ERBB3P21860 1342 aa12.81□□□□□ -0.36
NEB-215ENST00000489048 KIF1AQ12756 1690 aa12.81□□□□□ -0.36
NEB-215ENST00000489048 E7EWF7 191 aa12.81□□□□□ -0.36
NEB-215ENST00000489048 MYL6BP14649 208 aa12.81□□□□□ -0.36
NEB-215ENST00000489048 PDIA3P30101 505 aaKnown RBP12.81□□□□□ -0.36
NEB-215ENST00000489048 FGD1P98174 961 aa12.81□□□□□ -0.36
NEB-215ENST00000489048 AOPEPQ8N6M6 819 aa12.81□□□□□ -0.36
NEB-215ENST00000489048 ZNF215Q9UL58 517 aaPredicted RBP12.81□□□□□ -0.36
NEB-215ENST00000489048 NDUFB9Q9Y6M9 179 aa12.81□□□□□ -0.36
NEB-215ENST00000489048 GLI3P10071 1580 aa12.81□□□□□ -0.36
NEB-215ENST00000489048 NEDD4P46934 1319 aa12.81□□□□□ -0.36
NEB-215ENST00000489048 TUBB4AP04350 444 aa12.81□□□□□ -0.36
NEB-215ENST00000489048 CCDC150Q8NCX0 1101 aa12.81□□□□□ -0.36
NEB-215ENST00000489048 PCDHA7Q9UN72 937 aa12.81□□□□□ -0.36
NEB-215ENST00000489048 AXIN2Q9Y2T1 843 aa12.81□□□□□ -0.36
NEB-215ENST00000489048 LAMB4A4D0S4 1761 aa12.81□□□□□ -0.36
NEB-215ENST00000489048 SLC39A6Q13433 755 aa12.8□□□□□ -0.36
NEB-215ENST00000489048 L2HGDHQ9H9P8 463 aa12.8□□□□□ -0.36
NEB-215ENST00000489048 PAG1Q9NWQ8 432 aa12.8□□□□□ -0.36
NEB-215ENST00000489048 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.8□□□□□ -0.36
NEB-215ENST00000489048 PSDA5PKW4 1024 aaPredicted RBP12.8□□□□□ -0.36
NEB-215ENST00000489048 YEATS4O95619 227 aa12.8□□□□□ -0.36
NEB-215ENST00000489048 SNRPA1P09661 255 aaKnown RBP12.8□□□□□ -0.36
NEB-215ENST00000489048 HSPD1P10809 573 aaKnown RBP12.8□□□□□ -0.36
NEB-215ENST00000489048 ME1P48163 572 aa12.8□□□□□ -0.36
NEB-215ENST00000489048 KMT5BQ4FZB7 885 aa12.8□□□□□ -0.36
NEB-215ENST00000489048 LINC00301Q8NCQ3 95 aa12.8□□□□□ -0.36
NEB-215ENST00000489048 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.8□□□□□ -0.36
NEB-215ENST00000489048 DDX60Q8IY21 1712 aaKnown RBP12.8□□□□□ -0.36
NEB-215ENST00000489048 SLU7O95391 586 aaKnown RBP12.79□□□□□ -0.36
NEB-215ENST00000489048 FDPSP14324 419 aaKnown RBP12.79□□□□□ -0.36
NEB-215ENST00000489048 PHKG2P15735 406 aa12.79□□□□□ -0.36
NEB-215ENST00000489048 UBE3BQ7Z3V4 1068 aa12.79□□□□□ -0.36
NEB-215ENST00000489048 FILIP1Q7Z7B0 1213 aa12.79□□□□□ -0.36
NEB-215ENST00000489048 KCNG4Q8TDN1 519 aa12.79□□□□□ -0.36
NEB-215ENST00000489048 ZNF592Q92610 1267 aa12.79□□□□□ -0.36
NEB-215ENST00000489048 POLR3EQ9NVU0 708 aa12.79□□□□□ -0.36
NEB-215ENST00000489048 KIAA1468Q9P260 1216 aa12.79□□□□□ -0.36
NEB-215ENST00000489048 CCT2P78371 535 aaKnown RBP12.79□□□□□ -0.36
NEB-215ENST00000489048 ATG9AQ7Z3C6 839 aa12.79□□□□□ -0.36
NEB-215ENST00000489048 ZNF496Q96IT1 587 aaPredicted RBP12.79□□□□□ -0.36
NEB-215ENST00000489048 RGPD5Q99666 1765 aa12.78□□□□□ -0.36
NEB-215ENST00000489048 FAM193AP78312 1265 aa12.78□□□□□ -0.36
NEB-215ENST00000489048 KRT222Q8N1A0 295 aa12.78□□□□□ -0.36
NEB-215ENST00000489048 MAST3O60307 1309 aa12.78□□□□□ -0.36
NEB-215ENST00000489048 A0A087WZG4 1122 aa12.78□□□□□ -0.36
NEB-215ENST00000489048 SLFN14P0C7P3 912 aa12.78□□□□□ -0.36
NEB-215ENST00000489048 FOXO4P98177 505 aa12.78□□□□□ -0.36
NEB-215ENST00000489048 TAF3Q5VWG9 929 aa12.78□□□□□ -0.36
NEB-215ENST00000489048 PLBD2Q8NHP8 589 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms