RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 FTSJ3Q8IY81 847 aaKnown RBP17.85■□□□□ 0.45
BRCA1-218ENST00000489037 CNTROBQ8N137 903 aa17.85■□□□□ 0.45
BRCA1-218ENST00000489037 AGBL3Q8NEM8 1001 aa17.85■□□□□ 0.45
BRCA1-218ENST00000489037 ADAMTSL1Q8N6G6 1762 aa17.84■□□□□ 0.45
BRCA1-218ENST00000489037 UBE4AQ14139 1066 aa17.84■□□□□ 0.45
BRCA1-218ENST00000489037 METTL24Q5JXM2 366 aa17.84■□□□□ 0.45
BRCA1-218ENST00000489037 MAP1SQ66K74 1059 aaPredicted RBP17.84■□□□□ 0.45
BRCA1-218ENST00000489037 C15orf52Q6ZUT6 534 aaKnown RBP17.84■□□□□ 0.45
BRCA1-218ENST00000489037 MEIS3Q99687 375 aa17.84■□□□□ 0.45
BRCA1-218ENST00000489037 PUS3Q9BZE2 481 aaKnown RBP17.84■□□□□ 0.45
BRCA1-218ENST00000489037 LRRFIP2Q9Y608 721 aaKnown RBP17.84■□□□□ 0.45
BRCA1-218ENST00000489037 TXNRD3Q86VQ6 643 aa17.83■□□□□ 0.44
BRCA1-218ENST00000489037 ZC3H15Q8WU90 426 aaKnown RBP17.83■□□□□ 0.44
BRCA1-218ENST00000489037 RIPOR2Q9Y4F9 1068 aa17.83■□□□□ 0.44
BRCA1-218ENST00000489037 MYO3BQ8WXR4 1341 aa17.82■□□□□ 0.44
BRCA1-218ENST00000489037 KLRK1P26718 216 aa17.82■□□□□ 0.44
BRCA1-218ENST00000489037 STRIP1Q5VSL9 837 aa17.82■□□□□ 0.44
BRCA1-218ENST00000489037 TTLL5Q6EMB2 1281 aa17.82■□□□□ 0.44
BRCA1-218ENST00000489037 DZIP1LQ8IYY4 767 aaKnown RBP17.82■□□□□ 0.44
BRCA1-218ENST00000489037 CD209Q9NNX6 404 aa17.82■□□□□ 0.44
BRCA1-218ENST00000489037 POLR2AP24928 1970 aaKnown RBP17.82■□□□□ 0.44
BRCA1-218ENST00000489037 SNAP23O00161 211 aa17.81■□□□□ 0.44
BRCA1-218ENST00000489037 GNAI2P04899 355 aa17.81■□□□□ 0.44
BRCA1-218ENST00000489037 MS4A1P11836 297 aa17.81■□□□□ 0.44
BRCA1-218ENST00000489037 TBC1D10BQ4KMP7 808 aaPredicted RBP17.81■□□□□ 0.44
BRCA1-218ENST00000489037 LRRC24Q50LG9 513 aa17.81■□□□□ 0.44
BRCA1-218ENST00000489037 RBM26Q5T8P6 1007 aaKnown RBP17.81■□□□□ 0.44
BRCA1-218ENST00000489037 OGFOD1Q8N543 542 aa17.81■□□□□ 0.44
BRCA1-218ENST00000489037 TMEM57Q8N5G2 664 aa17.81■□□□□ 0.44
BRCA1-218ENST00000489037 KLHDC4Q8TBB5 520 aa17.81■□□□□ 0.44
BRCA1-218ENST00000489037 FBXO3Q9UK99 471 aa17.81■□□□□ 0.44
BRCA1-218ENST00000489037 EYA2O00167 538 aa17.8■□□□□ 0.44
BRCA1-218ENST00000489037 ITGBL1O95965 494 aaPredicted RBP17.8■□□□□ 0.44
BRCA1-218ENST00000489037 USP17L8P0C7I0 530 aa17.8■□□□□ 0.44
BRCA1-218ENST00000489037 GTF2IP78347 998 aa17.8■□□□□ 0.44
BRCA1-218ENST00000489037 SAMD7Q7Z3H4 446 aa17.8■□□□□ 0.44
BRCA1-218ENST00000489037 VPS37DQ86XT2 251 aa17.8■□□□□ 0.44
BRCA1-218ENST00000489037 TRPM4Q8TD43 1214 aa17.8■□□□□ 0.44
BRCA1-218ENST00000489037 TNNQ9UQP3 1299 aa17.8■□□□□ 0.44
BRCA1-218ENST00000489037 TRPM7Q96QT4 1865 aa17.8■□□□□ 0.44
BRCA1-218ENST00000489037 PASKQ96RG2 1323 aa17.79■□□□□ 0.44
BRCA1-218ENST00000489037 SHTN1A0MZ66 631 aa17.79■□□□□ 0.44
BRCA1-218ENST00000489037 PDE8BO95263 885 aa17.79■□□□□ 0.44
BRCA1-218ENST00000489037 HIBADHP31937 336 aaKnown RBP17.79■□□□□ 0.44
BRCA1-218ENST00000489037 RFX5P48382 616 aaPredicted RBP17.79■□□□□ 0.44
BRCA1-218ENST00000489037 MMP14P50281 582 aa17.79■□□□□ 0.44
BRCA1-218ENST00000489037 PTPN12Q05209 780 aaKnown RBP17.79■□□□□ 0.44
BRCA1-218ENST00000489037 KIF4BQ2VIQ3 1234 aa17.79■□□□□ 0.44
BRCA1-218ENST00000489037 CAVIN4Q5BKX8 364 aa17.79■□□□□ 0.44
BRCA1-218ENST00000489037 DACT2Q5SW24 774 aa17.79■□□□□ 0.44
BRCA1-218ENST00000489037 CREBZFQ9NS37 354 aa17.79■□□□□ 0.44
BRCA1-218ENST00000489037 HDAC9Q9UKV0 1011 aa17.79■□□□□ 0.44
BRCA1-218ENST00000489037 ZNF609O15014 1411 aa17.79■□□□□ 0.44
BRCA1-218ENST00000489037 TMEM88BA6NKF7 163 aa17.78■□□□□ 0.44
BRCA1-218ENST00000489037 IL1R1P14778 569 aa17.78■□□□□ 0.44
BRCA1-218ENST00000489037 HIRAP54198 1017 aaPredicted RBP17.78■□□□□ 0.44
BRCA1-218ENST00000489037 HTRA3P83110 453 aa17.78■□□□□ 0.44
BRCA1-218ENST00000489037 ITPRIPQ8IWB1 547 aa17.78■□□□□ 0.44
BRCA1-218ENST00000489037 SIL1Q9H173 461 aa17.78■□□□□ 0.44
BRCA1-218ENST00000489037 PGAP2Q9UHJ9 254 aa17.78■□□□□ 0.44
BRCA1-218ENST00000489037 IRS2Q9Y4H2 1338 aa17.77■□□□□ 0.44
BRCA1-218ENST00000489037 SRGAP3O43295 1099 aa17.77■□□□□ 0.44
BRCA1-218ENST00000489037 CIAO1O76071 339 aa17.77■□□□□ 0.44
BRCA1-218ENST00000489037 IFIT1P09914 478 aaKnown RBP17.77■□□□□ 0.44
BRCA1-218ENST00000489037 ZNF280AP59817 542 aaPredicted RBP17.77■□□□□ 0.44
BRCA1-218ENST00000489037 PUM3Q15397 648 aaKnown RBP17.77■□□□□ 0.44
BRCA1-218ENST00000489037 CDC37L1Q7L3B6 337 aa17.77■□□□□ 0.44
BRCA1-218ENST00000489037 DCPSQ96C86 337 aaKnown RBP17.77■□□□□ 0.44
BRCA1-218ENST00000489037 GMLQ99445 158 aa17.77■□□□□ 0.44
BRCA1-218ENST00000489037 CEP126Q9P2H0 1117 aa17.77■□□□□ 0.44
BRCA1-218ENST00000489037 RCAN3Q9UKA8 241 aa17.77■□□□□ 0.44
BRCA1-218ENST00000489037 FRAT2O75474 233 aaPredicted RBP17.76■□□□□ 0.43
BRCA1-218ENST00000489037 SLC5A1P13866 664 aa17.76■□□□□ 0.43
BRCA1-218ENST00000489037 GYG1P46976 350 aa17.76■□□□□ 0.43
BRCA1-218ENST00000489037 MYOZ2Q9NPC6 264 aa17.76■□□□□ 0.43
BRCA1-218ENST00000489037 SASH1O94885 1247 aa17.75■□□□□ 0.43
BRCA1-218ENST00000489037 IL15P40933 162 aaPredicted RBP17.75■□□□□ 0.43
BRCA1-218ENST00000489037 KLRG1Q96E93 195 aa17.75■□□□□ 0.43
BRCA1-218ENST00000489037 FAM84BQ96KN1 310 aaPredicted RBP17.75■□□□□ 0.43
BRCA1-218ENST00000489037 MXD3Q9BW11 206 aa17.75■□□□□ 0.43
BRCA1-218ENST00000489037 COPRSQ9NQ92 184 aa17.75■□□□□ 0.43
BRCA1-218ENST00000489037 FKBP1AP62942 108 aaKnown RBP17.74■□□□□ 0.43
BRCA1-218ENST00000489037 MTX1Q13505 466 aa17.74■□□□□ 0.43
BRCA1-218ENST00000489037 KIAA0825Q8IV33 1275 aa17.74■□□□□ 0.43
BRCA1-218ENST00000489037 DNAJC5GQ8N7S2 189 aa17.74■□□□□ 0.43
BRCA1-218ENST00000489037 VGLL2Q8N8G2 317 aa17.74■□□□□ 0.43
BRCA1-218ENST00000489037 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.74■□□□□ 0.43
BRCA1-218ENST00000489037 TDRD7Q8NHU6 1098 aaKnown RBP17.74■□□□□ 0.43
BRCA1-218ENST00000489037 LPIN2Q92539 896 aa17.74■□□□□ 0.43
BRCA1-218ENST00000489037 GLIS2Q9BZE0 524 aaPredicted RBP17.74■□□□□ 0.43
BRCA1-218ENST00000489037 ZNF646O15015 1829 aaPredicted RBP17.73■□□□□ 0.43
BRCA1-218ENST00000489037 EGFRP00533 1210 aa17.73■□□□□ 0.43
BRCA1-218ENST00000489037 SCARF1Q14162 830 aa17.73■□□□□ 0.43
BRCA1-218ENST00000489037 ATG9AQ7Z3C6 839 aa17.73■□□□□ 0.43
BRCA1-218ENST00000489037 KRT26Q7Z3Y9 468 aa17.73■□□□□ 0.43
BRCA1-218ENST00000489037 USP48Q86UV5 1035 aa17.73■□□□□ 0.43
BRCA1-218ENST00000489037 SULF1Q8IWU6 871 aa17.73■□□□□ 0.43
BRCA1-218ENST00000489037 ABT1Q9ULW3 272 aaKnown RBP17.73■□□□□ 0.43
BRCA1-218ENST00000489037 PA2G4Q9UQ80 394 aaKnown RBP17.73■□□□□ 0.43
BRCA1-218ENST00000489037 MYH13Q9UKX3 1938 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms