RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 IGKV5-2P06315 115 aa14.76□□□□□ -0.05
USP11-210ENST00000489030 ATP2B4P23634 1241 aa14.76□□□□□ -0.05
USP11-210ENST00000489030 DACT2Q5SW24 774 aa14.76□□□□□ -0.05
USP11-210ENST00000489030 ANKRD18AQ8IVF6 992 aa14.76□□□□□ -0.05
USP11-210ENST00000489030 CCDC191Q8NCU4 936 aa14.76□□□□□ -0.05
USP11-210ENST00000489030 METTL22Q9BUU2 404 aaPredicted RBP14.76□□□□□ -0.05
USP11-210ENST00000489030 GREM2Q9H772 168 aa14.76□□□□□ -0.05
USP11-210ENST00000489030 CWC25Q9NXE8 425 aaPredicted RBP14.76□□□□□ -0.05
USP11-210ENST00000489030 PITPNM2Q9BZ72 1349 aa14.75□□□□□ -0.05
USP11-210ENST00000489030 APAF1O14727 1248 aa14.75□□□□□ -0.05
USP11-210ENST00000489030 CTSWP56202 376 aa14.75□□□□□ -0.05
USP11-210ENST00000489030 FKBP1BP68106 108 aa14.75□□□□□ -0.05
USP11-210ENST00000489030 PRKG1Q13976 671 aa14.75□□□□□ -0.05
USP11-210ENST00000489030 MINPP1Q9UNW1 487 aa14.75□□□□□ -0.05
USP11-210ENST00000489030 MAP3K2Q9Y2U5 619 aa14.75□□□□□ -0.05
USP11-210ENST00000489030 WNT10BO00744 389 aa14.74□□□□□ -0.05
USP11-210ENST00000489030 PTPN12Q05209 780 aaKnown RBP14.74□□□□□ -0.05
USP11-210ENST00000489030 TTLL11Q8NHH1 800 aa14.74□□□□□ -0.05
USP11-210ENST00000489030 FBXW7Q969H0 707 aa14.74□□□□□ -0.05
USP11-210ENST00000489030 TTLL12Q14166 644 aaPredicted RBP14.73□□□□□ -0.05
USP11-210ENST00000489030 CWF19L2Q2TBE0 894 aaKnown RBP14.73□□□□□ -0.05
USP11-210ENST00000489030 PODNQ7Z5L7 613 aa14.73□□□□□ -0.05
USP11-210ENST00000489030 IFT57Q9NWB7 429 aa14.73□□□□□ -0.05
USP11-210ENST00000489030 PCDHAC2Q9Y5I4 1007 aa14.73□□□□□ -0.05
USP11-210ENST00000489030 MED23Q9ULK4 1368 aa14.73□□□□□ -0.05
USP11-210ENST00000489030 SPEF2Q9C093 1822 aa14.72□□□□□ -0.05
USP11-210ENST00000489030 PI4KAP2A4QPH2 592 aa14.72□□□□□ -0.05
USP11-210ENST00000489030 GPR25O00155 361 aa14.72□□□□□ -0.05
USP11-210ENST00000489030 TM4SF4P48230 202 aa14.72□□□□□ -0.05
USP11-210ENST00000489030 CCT4P50991 539 aaKnown RBP14.72□□□□□ -0.05
USP11-210ENST00000489030 NCBP3Q53F19 620 aaKnown RBP14.72□□□□□ -0.05
USP11-210ENST00000489030 G2E3Q7L622 706 aa14.72□□□□□ -0.05
USP11-210ENST00000489030 PI4KAP1Q8N8J0 262 aa14.72□□□□□ -0.05
USP11-210ENST00000489030 HDAC9Q9UKV0 1011 aa14.72□□□□□ -0.05
USP11-210ENST00000489030 AOX1Q06278 1338 aa14.71□□□□□ -0.05
USP11-210ENST00000489030 SNAP23O00161 211 aa14.71□□□□□ -0.05
USP11-210ENST00000489030 PRPF38BQ5VTL8 546 aaKnown RBP14.71□□□□□ -0.05
USP11-210ENST00000489030 BSDC1Q9NW68 430 aaPredicted RBP14.71□□□□□ -0.05
USP11-210ENST00000489030 PCDH10Q9P2E7 1040 aa14.71□□□□□ -0.05
USP11-210ENST00000489030 KIAA0825Q8IV33 1275 aa14.7□□□□□ -0.06
USP11-210ENST00000489030 REM2Q8IYK8 340 aaPredicted RBP14.7□□□□□ -0.06
USP11-210ENST00000489030 TSR2Q969E8 191 aaKnown RBP14.7□□□□□ -0.06
USP11-210ENST00000489030 ZBED3Q96IU2 234 aaPredicted RBP14.7□□□□□ -0.06
USP11-210ENST00000489030 CDC5LQ99459 802 aaKnown RBP14.7□□□□□ -0.06
USP11-210ENST00000489030 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.7□□□□□ -0.06
USP11-210ENST00000489030 SSC5DA1L4H1 1573 aa14.69□□□□□ -0.06
USP11-210ENST00000489030 GNAI1P63096 354 aa14.69□□□□□ -0.06
USP11-210ENST00000489030 HNRNPUQ00839 825 aaKnown RBP eCLIP14.69□□□□□ -0.06
USP11-210ENST00000489030 LDLRAD1Q5T700 205 aa14.69□□□□□ -0.06
USP11-210ENST00000489030 STRIP1Q5VSL9 837 aa14.69□□□□□ -0.06
USP11-210ENST00000489030 KSR2Q6VAB6 950 aa14.69□□□□□ -0.06
USP11-210ENST00000489030 CERS5Q8N5B7 392 aa14.69□□□□□ -0.06
USP11-210ENST00000489030 CLMNQ96JQ2 1002 aa14.69□□□□□ -0.06
USP11-210ENST00000489030 NEURL1BA8MQ27 555 aa14.68□□□□□ -0.06
USP11-210ENST00000489030 H7C1W4 665 aa14.68□□□□□ -0.06
USP11-210ENST00000489030 HSP90B1P14625 803 aaKnown RBP14.68□□□□□ -0.06
USP11-210ENST00000489030 CASP7P55210 303 aa14.68□□□□□ -0.06
USP11-210ENST00000489030 GTF2IP78347 998 aa14.68□□□□□ -0.06
USP11-210ENST00000489030 CAP1Q01518 475 aa14.68□□□□□ -0.06
USP11-210ENST00000489030 SPRYD7Q5W111 196 aa14.68□□□□□ -0.06
USP11-210ENST00000489030 UBE3BQ7Z3V4 1068 aa14.68□□□□□ -0.06
USP11-210ENST00000489030 COA1Q9GZY4 146 aa14.68□□□□□ -0.06
USP11-210ENST00000489030 IRS2Q9Y4H2 1338 aa14.67□□□□□ -0.06
USP11-210ENST00000489030 PKN2Q16513 984 aaKnown RBP14.67□□□□□ -0.06
USP11-210ENST00000489030 CCDC27Q2M243 656 aa14.67□□□□□ -0.06
USP11-210ENST00000489030 CCDC30Q5VVM6 783 aa14.67□□□□□ -0.06
USP11-210ENST00000489030 TTLL5Q6EMB2 1281 aa14.67□□□□□ -0.06
USP11-210ENST00000489030 FBXO46Q6PJ61 603 aaPredicted RBP14.67□□□□□ -0.06
USP11-210ENST00000489030 ANGEL1Q9UNK9 670 aaKnown RBP14.67□□□□□ -0.06
USP11-210ENST00000489030 HTTP42858 3142 aa14.67□□□□□ -0.06
USP11-210ENST00000489030 ZNF804BA4D1E1 1349 aa14.66□□□□□ -0.06
USP11-210ENST00000489030 POTEFA5A3E0 1075 aa14.66□□□□□ -0.06
USP11-210ENST00000489030 FKTNO75072 461 aa14.66□□□□□ -0.06
USP11-210ENST00000489030 DDX58O95786 925 aaKnown RBP14.66□□□□□ -0.06
USP11-210ENST00000489030 ITGA6P23229 1130 aa14.66□□□□□ -0.06
USP11-210ENST00000489030 OGFOD1Q8N543 542 aa14.66□□□□□ -0.06
USP11-210ENST00000489030 JAG2Q9Y219 1238 aa14.66□□□□□ -0.06
USP11-210ENST00000489030 SALL2Q9Y467 1007 aaPredicted RBP14.66□□□□□ -0.06
USP11-210ENST00000489030 IGF2BP3O00425 579 aaKnown RBP eCLIP14.65□□□□□ -0.06
USP11-210ENST00000489030 GJA5P36382 358 aa14.65□□□□□ -0.06
USP11-210ENST00000489030 NOM1Q5C9Z4 860 aaKnown RBP14.65□□□□□ -0.06
USP11-210ENST00000489030 ARMC9Q7Z3E5 817 aa14.65□□□□□ -0.06
USP11-210ENST00000489030 HELBQ8NG08 1087 aaPredicted RBP14.65□□□□□ -0.06
USP11-210ENST00000489030 CFHR5Q9BXR6 569 aa14.65□□□□□ -0.06
USP11-210ENST00000489030 LEMD3Q9Y2U8 911 aa14.65□□□□□ -0.06
USP11-210ENST00000489030 TAF5LO75529 589 aa14.64□□□□□ -0.07
USP11-210ENST00000489030 NF2P35240 595 aa14.64□□□□□ -0.07
USP11-210ENST00000489030 CHRNDQ07001 517 aa14.64□□□□□ -0.07
USP11-210ENST00000489030 GCKRQ14397 625 aa14.64□□□□□ -0.07
USP11-210ENST00000489030 IFNL1Q8IU54 200 aa14.64□□□□□ -0.07
USP11-210ENST00000489030 YTHDC1Q96MU7 727 aaKnown RBP14.64□□□□□ -0.07
USP11-210ENST00000489030 DEFB129Q9H1M3 183 aa14.64□□□□□ -0.07
USP11-210ENST00000489030 CD209Q9NNX6 404 aa14.64□□□□□ -0.07
USP11-210ENST00000489030 MYH3P11055 1940 aa14.64□□□□□ -0.07
USP11-210ENST00000489030 MYO3BQ8WXR4 1341 aa14.64□□□□□ -0.07
USP11-210ENST00000489030 KIAA0100Q14667 2235 aaKnown RBP14.64□□□□□ -0.07
USP11-210ENST00000489030 MKI67P46013 3256 aaKnown RBP14.63□□□□□ -0.07
USP11-210ENST00000489030 CLRN2A0PK11 232 aa14.63□□□□□ -0.07
USP11-210ENST00000489030 F8W031 263 aaPredicted RBP14.63□□□□□ -0.07
USP11-210ENST00000489030 CSF1RP07333 972 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms