RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.6■□□□□ 0.73
CLDN11-208ENST00000488989 ZNF512BQ96KM6 892 aaPredicted RBP19.6■□□□□ 0.73
CLDN11-208ENST00000488989 MYH13Q9UKX3 1938 aa19.59■□□□□ 0.73
CLDN11-208ENST00000488989 GSPT1P15170 499 aaKnown RBP19.59■□□□□ 0.73
CLDN11-208ENST00000488989 PIM2Q9P1W9 311 aa19.59■□□□□ 0.73
CLDN11-208ENST00000488989 ANKIB1Q9P2G1 1089 aa19.59■□□□□ 0.73
CLDN11-208ENST00000488989 GRIPAP1Q4V328 841 aa19.58■□□□□ 0.72
CLDN11-208ENST00000488989 CCDC158Q5M9N0 1113 aa19.58■□□□□ 0.72
CLDN11-208ENST00000488989 TSHZ3Q63HK5 1081 aa19.58■□□□□ 0.72
CLDN11-208ENST00000488989 GGA1Q9UJY5 639 aa19.58■□□□□ 0.72
CLDN11-208ENST00000488989 NSFL1CQ9UNZ2 370 aaKnown RBP19.58■□□□□ 0.72
CLDN11-208ENST00000488989 FER1L6Q2WGJ9 1857 aa19.57■□□□□ 0.72
CLDN11-208ENST00000488989 WTIPA6NIX2 430 aaPredicted RBP19.57■□□□□ 0.72
CLDN11-208ENST00000488989 KCNJ4P48050 445 aa19.57■□□□□ 0.72
CLDN11-208ENST00000488989 MPNDQ8N594 471 aa19.57■□□□□ 0.72
CLDN11-208ENST00000488989 TBC1D16Q8TBP0 767 aa19.57■□□□□ 0.72
CLDN11-208ENST00000488989 TMX4Q9H1E5 349 aaPredicted RBP19.57■□□□□ 0.72
CLDN11-208ENST00000488989 ARID4AP29374 1257 aaPredicted RBP19.56■□□□□ 0.72
CLDN11-208ENST00000488989 GORABQ5T7V8 394 aa19.56■□□□□ 0.72
CLDN11-208ENST00000488989 CCDC102BQ68D86 513 aa19.56■□□□□ 0.72
CLDN11-208ENST00000488989 OLFM4Q6UX06 510 aa19.56■□□□□ 0.72
CLDN11-208ENST00000488989 FBXO33Q7Z6M2 555 aa19.56■□□□□ 0.72
CLDN11-208ENST00000488989 RTFDC1Q9BY42 306 aaPredicted RBP19.56■□□□□ 0.72
CLDN11-208ENST00000488989 POLLQ9UGP5 575 aa19.56■□□□□ 0.72
CLDN11-208ENST00000488989 MED23Q9ULK4 1368 aa19.56■□□□□ 0.72
CLDN11-208ENST00000488989 UFL1O94874 794 aa19.55■□□□□ 0.72
CLDN11-208ENST00000488989 UQCRFS1P1P0C7P4 283 aa19.55■□□□□ 0.72
CLDN11-208ENST00000488989 PHKA1P46020 1223 aa19.55■□□□□ 0.72
CLDN11-208ENST00000488989 FAM84BQ96KN1 310 aaPredicted RBP19.55■□□□□ 0.72
CLDN11-208ENST00000488989 PPP1R1BQ9UD71 204 aaPredicted RBP19.55■□□□□ 0.72
CLDN11-208ENST00000488989 KLRK1P26718 216 aa19.54■□□□□ 0.72
CLDN11-208ENST00000488989 DALRD3Q5D0E6 543 aaKnown RBP19.54■□□□□ 0.72
CLDN11-208ENST00000488989 TTC39AQ5SRH9 613 aa19.54■□□□□ 0.72
CLDN11-208ENST00000488989 SOGA3Q5TF21 947 aa19.54■□□□□ 0.72
CLDN11-208ENST00000488989 DPP8Q6V1X1 898 aaPredicted RBP19.54■□□□□ 0.72
CLDN11-208ENST00000488989 HAUS7Q99871 368 aa19.54■□□□□ 0.72
CLDN11-208ENST00000488989 BOLA2Q9H3K6 86 aa19.54■□□□□ 0.72
CLDN11-208ENST00000488989 BCAMP50895 628 aa19.53■□□□□ 0.72
CLDN11-208ENST00000488989 CCDC93Q567U6 631 aa19.53■□□□□ 0.72
CLDN11-208ENST00000488989 CAVIN4Q5BKX8 364 aa19.53■□□□□ 0.72
CLDN11-208ENST00000488989 TXNRD3Q86VQ6 643 aa19.53■□□□□ 0.72
CLDN11-208ENST00000488989 KLHL34Q8N239 644 aa19.53■□□□□ 0.72
CLDN11-208ENST00000488989 NLGN2Q8NFZ4 835 aa19.53■□□□□ 0.72
CLDN11-208ENST00000488989 FHDC1Q9C0D6 1143 aaPredicted RBP19.53■□□□□ 0.72
CLDN11-208ENST00000488989 MYH7P12883 1935 aa19.53■□□□□ 0.72
CLDN11-208ENST00000488989 CHD4Q14839 1912 aa19.53■□□□□ 0.72
CLDN11-208ENST00000488989 C21orf2O43822 256 aa19.52■□□□□ 0.72
CLDN11-208ENST00000488989 SDSP20132 328 aa19.52■□□□□ 0.72
CLDN11-208ENST00000488989 GYG1P46976 350 aa19.52■□□□□ 0.72
CLDN11-208ENST00000488989 DOCK2Q92608 1830 aa19.52■□□□□ 0.72
CLDN11-208ENST00000488989 MYO5AQ9Y4I1 1855 aaKnown RBP19.52■□□□□ 0.71
CLDN11-208ENST00000488989 C6orf229H3BNL8 230 aa19.51■□□□□ 0.71
CLDN11-208ENST00000488989 SEMA3EO15041 775 aa19.51■□□□□ 0.71
CLDN11-208ENST00000488989 HIBADHP31937 336 aaKnown RBP19.51■□□□□ 0.71
CLDN11-208ENST00000488989 MCAMP43121 646 aa19.51■□□□□ 0.71
CLDN11-208ENST00000488989 SCARF1Q14162 830 aa19.51■□□□□ 0.71
CLDN11-208ENST00000488989 RTKN2Q8IZC4 609 aa19.51■□□□□ 0.71
CLDN11-208ENST00000488989 PSMD1Q99460 953 aa19.51■□□□□ 0.71
CLDN11-208ENST00000488989 PELP1Q8IZL8 1130 aaKnown RBP19.5■□□□□ 0.71
CLDN11-208ENST00000488989 SUPT20HQ8NEM7 779 aa19.5■□□□□ 0.71
CLDN11-208ENST00000488989 EYA3Q99504 573 aa19.5■□□□□ 0.71
CLDN11-208ENST00000488989 SYT17Q9BSW7 474 aa19.5■□□□□ 0.71
CLDN11-208ENST00000488989 GNL3LQ9NVN8 582 aaKnown RBP19.5■□□□□ 0.71
CLDN11-208ENST00000488989 PDS5AQ29RF7 1337 aaKnown RBP19.5■□□□□ 0.71
CLDN11-208ENST00000488989 RASGRF1Q13972 1273 aa19.49■□□□□ 0.71
CLDN11-208ENST00000488989 ZNF804AQ7Z570 1209 aa19.49■□□□□ 0.71
CLDN11-208ENST00000488989 TICAM2Q86XR7 235 aa19.49■□□□□ 0.71
CLDN11-208ENST00000488989 CNTROBQ8N137 903 aa19.49■□□□□ 0.71
CLDN11-208ENST00000488989 EVI5LQ96CN4 794 aa19.49■□□□□ 0.71
CLDN11-208ENST00000488989 GPR101Q96P66 508 aaPredicted RBP19.49■□□□□ 0.71
CLDN11-208ENST00000488989 HMG20BQ9P0W2 317 aa19.49■□□□□ 0.71
CLDN11-208ENST00000488989 ZNF219Q9P2Y4 722 aaPredicted RBP19.49■□□□□ 0.71
CLDN11-208ENST00000488989 IL1R1P14778 569 aa19.48■□□□□ 0.71
CLDN11-208ENST00000488989 VPS37DQ86XT2 251 aa19.48■□□□□ 0.71
CLDN11-208ENST00000488989 TDRD7Q8NHU6 1098 aaKnown RBP19.48■□□□□ 0.71
CLDN11-208ENST00000488989 VPS33BQ9H267 617 aa19.48■□□□□ 0.71
CLDN11-208ENST00000488989 COL1A1P02452 1464 aaPredicted RBP19.48■□□□□ 0.71
CLDN11-208ENST00000488989 RFX7Q2KHR2 1363 aa19.47■□□□□ 0.71
CLDN11-208ENST00000488989 PSME4Q14997 1843 aa19.47■□□□□ 0.71
CLDN11-208ENST00000488989 TRIM6-TRIM34B2RNG4 842 aa19.47■□□□□ 0.71
CLDN11-208ENST00000488989 ZAP70P43403 619 aa19.47■□□□□ 0.71
CLDN11-208ENST00000488989 WASHC4Q2M389 1173 aa19.47■□□□□ 0.71
CLDN11-208ENST00000488989 SPATA5Q8NB90 893 aa19.47■□□□□ 0.71
CLDN11-208ENST00000488989 ZC3H12CQ9C0D7 883 aaKnown RBP19.47■□□□□ 0.71
CLDN11-208ENST00000488989 COA1Q9GZY4 146 aa19.47■□□□□ 0.71
CLDN11-208ENST00000488989 CD209Q9NNX6 404 aa19.47■□□□□ 0.71
CLDN11-208ENST00000488989 PAG1Q9NWQ8 432 aa19.47■□□□□ 0.71
CLDN11-208ENST00000488989 DENND2AQ9ULE3 1009 aa19.47■□□□□ 0.71
CLDN11-208ENST00000488989 BCS1LQ9Y276 419 aa19.47■□□□□ 0.71
CLDN11-208ENST00000488989 MAP4K4O95819 1239 aaPredicted RBP19.46■□□□□ 0.71
CLDN11-208ENST00000488989 FKBP4Q02790 459 aaKnown RBP eCLIP19.46■□□□□ 0.71
CLDN11-208ENST00000488989 C8orf34Q49A92 452 aa19.46■□□□□ 0.71
CLDN11-208ENST00000488989 RILPL2Q969X0 211 aa19.46■□□□□ 0.71
CLDN11-208ENST00000488989 DNAJC2Q99543 621 aaKnown RBP19.46■□□□□ 0.71
CLDN11-208ENST00000488989 NDUFB9Q9Y6M9 179 aa19.46■□□□□ 0.71
CLDN11-208ENST00000488989 LTBP3Q9NS15 1303 aa19.46■□□□□ 0.71
CLDN11-208ENST00000488989 ZNF646O15015 1829 aaPredicted RBP19.46■□□□□ 0.71
CLDN11-208ENST00000488989 CDC45O75419 566 aa19.45■□□□□ 0.7
CLDN11-208ENST00000488989 CYP2E1P05181 493 aaPredicted RBP19.45■□□□□ 0.7
CLDN11-208ENST00000488989 KIAA2012Q0VF49 1180 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms