RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 CRY2Q49AN0 593 aa15.99■□□□□ 0.15
CHD1L-208ENST00000488864 PDCL3Q9H2J4 239 aa15.99■□□□□ 0.15
CHD1L-208ENST00000488864 FBXO3Q9UK99 471 aa15.99■□□□□ 0.15
CHD1L-208ENST00000488864 RIC1Q4ADV7 1423 aa15.99■□□□□ 0.15
CHD1L-208ENST00000488864 CYP2E1P05181 493 aaPredicted RBP15.99■□□□□ 0.15
CHD1L-208ENST00000488864 MSNP26038 577 aaKnown RBP15.99■□□□□ 0.15
CHD1L-208ENST00000488864 DBNDD2Q9BQY9 259 aa15.99■□□□□ 0.15
CHD1L-208ENST00000488864 DBNLQ9UJU6 430 aaKnown RBP15.99■□□□□ 0.15
CHD1L-208ENST00000488864 SPEF2Q9C093 1822 aa15.99■□□□□ 0.15
CHD1L-208ENST00000488864 A0A1B0GUL7 405 aa15.98■□□□□ 0.15
CHD1L-208ENST00000488864 WTIPA6NIX2 430 aaPredicted RBP15.98■□□□□ 0.15
CHD1L-208ENST00000488864 CHRNDQ07001 517 aa15.98■□□□□ 0.15
CHD1L-208ENST00000488864 RABEP1Q15276 862 aa15.98■□□□□ 0.15
CHD1L-208ENST00000488864 RBM10P98175 930 aaKnown RBP15.98■□□□□ 0.15
CHD1L-208ENST00000488864 VGLL2Q8N8G2 317 aa15.98■□□□□ 0.15
CHD1L-208ENST00000488864 BSDC1Q9NW68 430 aaPredicted RBP15.98■□□□□ 0.15
CHD1L-208ENST00000488864 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.98■□□□□ 0.15
CHD1L-208ENST00000488864 PDE8BO95263 885 aa15.97■□□□□ 0.15
CHD1L-208ENST00000488864 GRAPQ13588 217 aa15.97■□□□□ 0.15
CHD1L-208ENST00000488864 GRAPLQ8TC17 118 aaPredicted RBP15.97■□□□□ 0.15
CHD1L-208ENST00000488864 USP26Q9BXU7 913 aa15.97■□□□□ 0.15
CHD1L-208ENST00000488864 RBM27Q9P2N5 1060 aaKnown RBP15.97■□□□□ 0.15
CHD1L-208ENST00000488864 NRXN2Q9P2S2 1712 aa15.97■□□□□ 0.15
CHD1L-208ENST00000488864 MAP4K4O95819 1239 aaPredicted RBP15.97■□□□□ 0.15
CHD1L-208ENST00000488864 ADORA1P30542 326 aa15.97■□□□□ 0.15
CHD1L-208ENST00000488864 CHAMP1Q96JM3 812 aa15.97■□□□□ 0.15
CHD1L-208ENST00000488864 MINPP1Q9UNW1 487 aa15.97■□□□□ 0.15
CHD1L-208ENST00000488864 ANKRD31Q8N7Z5 1873 aa15.96■□□□□ 0.15
CHD1L-208ENST00000488864 KLRG2A4D1S0 409 aaPredicted RBP15.96■□□□□ 0.15
CHD1L-208ENST00000488864 SRGNP10124 158 aa15.96■□□□□ 0.15
CHD1L-208ENST00000488864 CHRNA5P30532 468 aa15.96■□□□□ 0.15
CHD1L-208ENST00000488864 NUCB2P80303 420 aa15.96■□□□□ 0.15
CHD1L-208ENST00000488864 TTC22Q5TAA0 569 aa15.96■□□□□ 0.15
CHD1L-208ENST00000488864 ZGPATQ8N5A5 531 aaKnown RBP15.96■□□□□ 0.15
CHD1L-208ENST00000488864 RBM17Q96I25 401 aaKnown RBP15.96■□□□□ 0.15
CHD1L-208ENST00000488864 MTFR1LQ9H019 292 aa15.96■□□□□ 0.15
CHD1L-208ENST00000488864 MROH5Q6ZUA9 1318 aa15.96■□□□□ 0.15
CHD1L-208ENST00000488864 PDE6BP35913 854 aa15.96■□□□□ 0.15
CHD1L-208ENST00000488864 ATP2B3Q16720 1220 aa15.96■□□□□ 0.15
CHD1L-208ENST00000488864 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.96■□□□□ 0.15
CHD1L-208ENST00000488864 ZNF622Q969S3 477 aaKnown RBP eCLIP15.96■□□□□ 0.156e-8■□□□□ 11.2
CHD1L-208ENST00000488864 LRP5O75197 1615 aa15.95■□□□□ 0.14
CHD1L-208ENST00000488864 PRPF40AO75400 957 aaKnown RBP15.95■□□□□ 0.14
CHD1L-208ENST00000488864 PI4K2BQ8TCG2 481 aa15.95■□□□□ 0.14
CHD1L-208ENST00000488864 GPT2Q8TD30 523 aa15.95■□□□□ 0.14
CHD1L-208ENST00000488864 OSBPL3Q9H4L5 887 aa15.95■□□□□ 0.14
CHD1L-208ENST00000488864 STAP2Q9UGK3 403 aa15.95■□□□□ 0.14
CHD1L-208ENST00000488864 R3HCC1Q9Y3T6 440 aaKnown RBP15.95■□□□□ 0.14
CHD1L-208ENST00000488864 ZNF609O15014 1411 aa15.95■□□□□ 0.14
CHD1L-208ENST00000488864 C2CD5Q86YS7 1000 aa15.95■□□□□ 0.14
CHD1L-208ENST00000488864 ECHDC1Q9NTX5 307 aa15.95■□□□□ 0.14
CHD1L-208ENST00000488864 PPP1R1BQ9UD71 204 aaPredicted RBP15.95■□□□□ 0.14
CHD1L-208ENST00000488864 AKAP2Q9Y2D5 859 aa15.95■□□□□ 0.14
CHD1L-208ENST00000488864 ZDHHC9Q9Y397 364 aa15.95■□□□□ 0.14
CHD1L-208ENST00000488864 NDUFB9Q9Y6M9 179 aa15.95■□□□□ 0.14
CHD1L-208ENST00000488864 XAGE2Q96GT9 111 aa15.94■□□□□ 0.14
CHD1L-208ENST00000488864 BOLA2Q9H3K6 86 aa15.94■□□□□ 0.14
CHD1L-208ENST00000488864 GPR108Q9NPR9 543 aa15.94■□□□□ 0.14
CHD1L-208ENST00000488864 NOL7Q9UMY1 257 aaKnown RBP15.94■□□□□ 0.14
CHD1L-208ENST00000488864 HOXA10P31260 410 aaPredicted RBP15.94■□□□□ 0.14
CHD1L-208ENST00000488864 GORABQ5T7V8 394 aa15.94■□□□□ 0.14
CHD1L-208ENST00000488864 PDLIM2Q96JY6 352 aa15.94■□□□□ 0.14
CHD1L-208ENST00000488864 WWC3Q9ULE0 1092 aa15.94■□□□□ 0.14
CHD1L-208ENST00000488864 TRIM6-TRIM34B2RNG4 842 aa15.93■□□□□ 0.14
CHD1L-208ENST00000488864 PUM3Q15397 648 aaKnown RBP15.93■□□□□ 0.14
CHD1L-208ENST00000488864 OLFM4Q6UX06 510 aa15.93■□□□□ 0.14
CHD1L-208ENST00000488864 KLHL34Q8N239 644 aa15.93■□□□□ 0.14
CHD1L-208ENST00000488864 GPATCH3Q96I76 525 aa15.93■□□□□ 0.14
CHD1L-208ENST00000488864 H0YIN7 160 aa15.93■□□□□ 0.14
CHD1L-208ENST00000488864 NPR1P16066 1061 aa15.93■□□□□ 0.14
CHD1L-208ENST00000488864 SDSP20132 328 aa15.93■□□□□ 0.14
CHD1L-208ENST00000488864 POLD1P28340 1107 aa15.93■□□□□ 0.14
CHD1L-208ENST00000488864 RILPL2Q969X0 211 aa15.93■□□□□ 0.14
CHD1L-208ENST00000488864 HS1BP3Q53T59 392 aa15.92■□□□□ 0.14
CHD1L-208ENST00000488864 MASTLQ96GX5 879 aa15.92■□□□□ 0.14
CHD1L-208ENST00000488864 CRAMP1Q96RY5 1269 aa15.92■□□□□ 0.14
CHD1L-208ENST00000488864 ANKIB1Q9P2G1 1089 aa15.92■□□□□ 0.14
CHD1L-208ENST00000488864 NSFL1CQ9UNZ2 370 aaKnown RBP15.92■□□□□ 0.14
CHD1L-208ENST00000488864 TTC41PQ6P2S7 1318 aa15.92■□□□□ 0.14
CHD1L-208ENST00000488864 FGFR2P21802 821 aa15.92■□□□□ 0.14
CHD1L-208ENST00000488864 LPIN2Q92539 896 aa15.92■□□□□ 0.14
CHD1L-208ENST00000488864 ZNF219Q9P2Y4 722 aaPredicted RBP15.92■□□□□ 0.14
CHD1L-208ENST00000488864 ERC2O15083 957 aa15.91■□□□□ 0.14
CHD1L-208ENST00000488864 ZNF500O60304 480 aaPredicted RBP15.91■□□□□ 0.14
CHD1L-208ENST00000488864 GLRX3O76003 335 aaKnown RBP15.91■□□□□ 0.14
CHD1L-208ENST00000488864 TERF1P54274 439 aa15.91■□□□□ 0.14
CHD1L-208ENST00000488864 EDC3Q96F86 508 aaKnown RBP15.91■□□□□ 0.14
CHD1L-208ENST00000488864 COL11A2P13942 1736 aaPredicted RBP15.91■□□□□ 0.14
CHD1L-208ENST00000488864 A0A0G2JLW4 131 aa15.9■□□□□ 0.14
CHD1L-208ENST00000488864 BBOX1O75936 387 aa15.9■□□□□ 0.14
CHD1L-208ENST00000488864 KCNJ4P48050 445 aa15.9■□□□□ 0.14
CHD1L-208ENST00000488864 TMEM63CQ9P1W3 806 aa15.9■□□□□ 0.14
CHD1L-208ENST00000488864 PPEF1O14829 653 aaPredicted RBP15.9■□□□□ 0.14
CHD1L-208ENST00000488864 SLC5A1P13866 664 aa15.9■□□□□ 0.14
CHD1L-208ENST00000488864 KLRK1P26718 216 aa15.9■□□□□ 0.14
CHD1L-208ENST00000488864 DNAJC2Q99543 621 aaKnown RBP15.9■□□□□ 0.14
CHD1L-208ENST00000488864 CWC22Q9HCG8 908 aaKnown RBP15.9■□□□□ 0.14
CHD1L-208ENST00000488864 PHKA1P46020 1223 aa15.89■□□□□ 0.13
CHD1L-208ENST00000488864 FOXD4L5Q5VV16 416 aaPredicted RBP15.89■□□□□ 0.13
CHD1L-208ENST00000488864 FOXD4L4Q8WXT5 416 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms