RNA–Protein interactions for RNA: ENST00000488809.2

PTCH1-211, Transcript of patched 1, humanhuman

TSL 3

Gene PTCH1, Length 301 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-211ENST00000488809 MANSC4A6NHS7 340 aaPredicted RBP8.41□□□□□ -1.06
PTCH1-211ENST00000488809 WNT10BO00744 389 aa8.41□□□□□ -1.06
PTCH1-211ENST00000488809 PCCAP05165 728 aaPredicted RBP8.41□□□□□ -1.06
PTCH1-211ENST00000488809 WDR43Q15061 677 aaKnown RBP eCLIP8.41□□□□□ -1.06
PTCH1-211ENST00000488809 KRT24Q2M2I5 525 aa8.41□□□□□ -1.06
PTCH1-211ENST00000488809 RUNDC1Q96C34 613 aa8.41□□□□□ -1.06
PTCH1-211ENST00000488809 GMLQ99445 158 aa8.41□□□□□ -1.06
PTCH1-211ENST00000488809 MYD88Q99836 296 aa8.41□□□□□ -1.06
PTCH1-211ENST00000488809 CWC25Q9NXE8 425 aaPredicted RBP8.41□□□□□ -1.06
PTCH1-211ENST00000488809 CALD1Q05682 793 aaKnown RBP8.4□□□□□ -1.06
PTCH1-211ENST00000488809 MKRN3Q13064 507 aaKnown RBP8.4□□□□□ -1.06
PTCH1-211ENST00000488809 NBPF9Q3BBW0 867 aa8.4□□□□□ -1.06
PTCH1-211ENST00000488809 STRIP1Q5VSL9 837 aa8.4□□□□□ -1.06
PTCH1-211ENST00000488809 DUSP27Q5VZP5 1158 aa8.4□□□□□ -1.06
PTCH1-211ENST00000488809 OTUD7BQ6GQQ9 843 aa8.4□□□□□ -1.06
PTCH1-211ENST00000488809 MOB2Q70IA6 237 aa8.4□□□□□ -1.06
PTCH1-211ENST00000488809 ERO1AQ96HE7 468 aa8.4□□□□□ -1.06
PTCH1-211ENST00000488809 COA1Q9GZY4 146 aa8.4□□□□□ -1.06
PTCH1-211ENST00000488809 UNCXA6NJT0 531 aa8.39□□□□□ -1.07
PTCH1-211ENST00000488809 PPP1R12BO60237 982 aaPredicted RBP8.39□□□□□ -1.07
PTCH1-211ENST00000488809 ZBTB48P10074 688 aaPredicted RBP8.39□□□□□ -1.07
PTCH1-211ENST00000488809 IGHMBP2P38935 993 aaKnown RBP8.39□□□□□ -1.07
PTCH1-211ENST00000488809 CCT4P50991 539 aaKnown RBP8.39□□□□□ -1.07
PTCH1-211ENST00000488809 NEXNQ0ZGT2 675 aa8.39□□□□□ -1.07
PTCH1-211ENST00000488809 DACT2Q5SW24 774 aa8.39□□□□□ -1.07
PTCH1-211ENST00000488809 PRAMEF18Q5VWM3 479 aa8.39□□□□□ -1.07
PTCH1-211ENST00000488809 SPRYD7Q5W111 196 aa8.39□□□□□ -1.07
PTCH1-211ENST00000488809 CCDC146Q8IYE0 955 aa8.39□□□□□ -1.07
PTCH1-211ENST00000488809 CCDC85AQ96PX6 553 aaPredicted RBP8.39□□□□□ -1.07
PTCH1-211ENST00000488809 BSDC1Q9NW68 430 aaPredicted RBP8.39□□□□□ -1.07
PTCH1-211ENST00000488809 ANGEL1Q9UNK9 670 aaKnown RBP8.39□□□□□ -1.07
PTCH1-211ENST00000488809 SCAF8Q9UPN6 1271 aaKnown RBP8.39□□□□□ -1.07
PTCH1-211ENST00000488809 LEMD3Q9Y2U8 911 aa8.39□□□□□ -1.07
PTCH1-211ENST00000488809 TRIM17Q9Y577 477 aa8.39□□□□□ -1.07
PTCH1-211ENST00000488809 PPP2R3BQ9Y5P8 575 aa8.39□□□□□ -1.07
PTCH1-211ENST00000488809 KIAA0100Q14667 2235 aaKnown RBP8.39□□□□□ -1.07
PTCH1-211ENST00000488809 CENPFP49454 3210 aa8.38□□□□□ -1.07
PTCH1-211ENST00000488809 MYO1BO43795 1136 aa8.38□□□□□ -1.07
PTCH1-211ENST00000488809 CTSWP56202 376 aa8.38□□□□□ -1.07
PTCH1-211ENST00000488809 PRKG1Q13976 671 aa8.38□□□□□ -1.07
PTCH1-211ENST00000488809 ARHGEF6Q15052 776 aa8.38□□□□□ -1.07
PTCH1-211ENST00000488809 HABP4Q5JVS0 413 aaKnown RBP8.38□□□□□ -1.07
PTCH1-211ENST00000488809 TTLL5Q6EMB2 1281 aa8.38□□□□□ -1.07
PTCH1-211ENST00000488809 SLC10A4Q96EP9 437 aa8.38□□□□□ -1.07
PTCH1-211ENST00000488809 METTL22Q9BUU2 404 aaPredicted RBP8.38□□□□□ -1.07
PTCH1-211ENST00000488809 TRIM35Q9UPQ4 493 aa8.38□□□□□ -1.07
PTCH1-211ENST00000488809 A0A1B0GUL6 1792 aa8.38□□□□□ -1.07
PTCH1-211ENST00000488809 MKI67P46013 3256 aaKnown RBP8.37□□□□□ -1.07
PTCH1-211ENST00000488809 MYBBP1AQ9BQG0 1328 aaKnown RBP8.37□□□□□ -1.07
PTCH1-211ENST00000488809 SASH1O94885 1247 aa8.37□□□□□ -1.07
PTCH1-211ENST00000488809 KCNJ4P48050 445 aa8.37□□□□□ -1.07
PTCH1-211ENST00000488809 GNAI1P63096 354 aa8.37□□□□□ -1.07
PTCH1-211ENST00000488809 PTPN12Q05209 780 aaKnown RBP8.37□□□□□ -1.07
PTCH1-211ENST00000488809 LDLRAD1Q5T700 205 aa8.37□□□□□ -1.07
PTCH1-211ENST00000488809 CCDC30Q5VVM6 783 aa8.37□□□□□ -1.07
PTCH1-211ENST00000488809 OTOP1Q7RTM1 612 aa8.37□□□□□ -1.07
PTCH1-211ENST00000488809 IFNL1Q8IU54 200 aa8.37□□□□□ -1.07
PTCH1-211ENST00000488809 MPHOSPH8Q99549 860 aa8.37□□□□□ -1.07
PTCH1-211ENST00000488809 ANKRD2Q9GZV1 360 aa8.37□□□□□ -1.07
PTCH1-211ENST00000488809 PHAXQ9H814 394 aaKnown RBP8.37□□□□□ -1.07
PTCH1-211ENST00000488809 MBIPQ9NS73 344 aa8.37□□□□□ -1.07
PTCH1-211ENST00000488809 IFT57Q9NWB7 429 aa8.37□□□□□ -1.07
PTCH1-211ENST00000488809 MINPP1Q9UNW1 487 aa8.37□□□□□ -1.07
PTCH1-211ENST00000488809 OTOFQ9HC10 1997 aa8.37□□□□□ -1.07
PTCH1-211ENST00000488809 ZNF804BA4D1E1 1349 aa8.36□□□□□ -1.07
PTCH1-211ENST00000488809 IREB2P48200 963 aaKnown RBP8.36□□□□□ -1.07
PTCH1-211ENST00000488809 DLGAP5Q15398 846 aa8.36□□□□□ -1.07
PTCH1-211ENST00000488809 MAP3K11Q16584 847 aa8.36□□□□□ -1.07
PTCH1-211ENST00000488809 SUPT20HL1Q3ZLR7 823 aa8.36□□□□□ -1.07
PTCH1-211ENST00000488809 KIAA0825Q8IV33 1275 aa8.36□□□□□ -1.07
PTCH1-211ENST00000488809 TTLL11Q8NHH1 800 aa8.36□□□□□ -1.07
PTCH1-211ENST00000488809 TMEM106CQ9BVX2 250 aa8.36□□□□□ -1.07
PTCH1-211ENST00000488809 DEFB129Q9H1M3 183 aa8.36□□□□□ -1.07
PTCH1-211ENST00000488809 HTTP42858 3142 aa8.36□□□□□ -1.07
PTCH1-211ENST00000488809 ARAP2Q8WZ64 1704 aa8.35□□□□□ -1.07
PTCH1-211ENST00000488809 WDHD1O75717 1129 aaPredicted RBP8.35□□□□□ -1.07
PTCH1-211ENST00000488809 GTF2IP78347 998 aa8.35□□□□□ -1.07
PTCH1-211ENST00000488809 SP3Q02447 781 aa8.35□□□□□ -1.07
PTCH1-211ENST00000488809 NBPF11Q86T75 865 aa8.35□□□□□ -1.07
PTCH1-211ENST00000488809 WNK4Q96J92 1243 aa8.35□□□□□ -1.07
PTCH1-211ENST00000488809 MXD3Q9BW11 206 aa8.35□□□□□ -1.07
PTCH1-211ENST00000488809 STK31Q9BXU1 1019 aa8.35□□□□□ -1.07
PTCH1-211ENST00000488809 GREM2Q9H772 168 aa8.35□□□□□ -1.07
PTCH1-211ENST00000488809 EFCC1Q9HA90 598 aa8.35□□□□□ -1.07
PTCH1-211ENST00000488809 PTPN22Q9Y2R2 807 aa8.35□□□□□ -1.07
PTCH1-211ENST00000488809 MAP3K2Q9Y2U5 619 aa8.35□□□□□ -1.07
PTCH1-211ENST00000488809 POTEFA5A3E0 1075 aa8.34□□□□□ -1.07
PTCH1-211ENST00000488809 ELL2O00472 640 aaPredicted RBP8.34□□□□□ -1.07
PTCH1-211ENST00000488809 ZNF853P0CG23 659 aa8.34□□□□□ -1.07
PTCH1-211ENST00000488809 TNFAIP1Q13829 316 aa8.34□□□□□ -1.07
PTCH1-211ENST00000488809 KSR2Q6VAB6 950 aa8.34□□□□□ -1.07
PTCH1-211ENST00000488809 ANKRD13AQ8IZ07 590 aa8.34□□□□□ -1.07
PTCH1-211ENST00000488809 MTMR14Q8NCE2 650 aa8.34□□□□□ -1.07
PTCH1-211ENST00000488809 CD99L2Q8TCZ2 262 aa8.34□□□□□ -1.07
PTCH1-211ENST00000488809 JARID2Q92833 1246 aaPredicted RBP8.34□□□□□ -1.07
PTCH1-211ENST00000488809 ARMC5Q96C12 935 aa8.34□□□□□ -1.07
PTCH1-211ENST00000488809 R3HDMLQ9H3Y0 253 aa8.34□□□□□ -1.07
PTCH1-211ENST00000488809 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.34□□□□□ -1.07
PTCH1-211ENST00000488809 BRCA2P51587 3418 aa8.33□□□□□ -1.08
PTCH1-211ENST00000488809 PI4KAP2A4QPH2 592 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms