RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 ZNRF3Q9ULT6 936 aa8.19□□□□□ -1.1
PTPRD-212ENST00000488774 SCAF8Q9UPN6 1271 aaKnown RBP8.19□□□□□ -1.1
PTPRD-212ENST00000488774 ZNF804BA4D1E1 1349 aa8.19□□□□□ -1.1
PTPRD-212ENST00000488774 MED23Q9ULK4 1368 aa8.19□□□□□ -1.1
PTPRD-212ENST00000488774 DOCK2Q92608 1830 aa8.18□□□□□ -1.1
PTPRD-212ENST00000488774 ADORA1P30542 326 aa8.18□□□□□ -1.1
PTPRD-212ENST00000488774 IGHMBP2P38935 993 aaKnown RBP8.18□□□□□ -1.1
PTPRD-212ENST00000488774 GYG1P46976 350 aa8.18□□□□□ -1.1
PTPRD-212ENST00000488774 C1QTNF8P60827 252 aa8.18□□□□□ -1.1
PTPRD-212ENST00000488774 MTX1Q13505 466 aa8.18□□□□□ -1.1
PTPRD-212ENST00000488774 POLA2Q14181 598 aa8.18□□□□□ -1.1
PTPRD-212ENST00000488774 CCDC57Q2TAC2 916 aa8.18□□□□□ -1.1
PTPRD-212ENST00000488774 TMC4Q7Z404 712 aa8.18□□□□□ -1.1
PTPRD-212ENST00000488774 ITPRIPQ8IWB1 547 aa8.18□□□□□ -1.1
PTPRD-212ENST00000488774 NIM1KQ8IY84 436 aa8.18□□□□□ -1.1
PTPRD-212ENST00000488774 TAF1DQ9H5J8 278 aaPredicted RBP8.18□□□□□ -1.1
PTPRD-212ENST00000488774 IQSEC3Q9UPP2 1182 aaPredicted RBP8.18□□□□□ -1.1
PTPRD-212ENST00000488774 ZC3H4Q9UPT8 1303 aaKnown RBP8.18□□□□□ -1.1
PTPRD-212ENST00000488774 MYH7P12883 1935 aa8.17□□□□□ -1.1
PTPRD-212ENST00000488774 OTOFQ9HC10 1997 aa8.17□□□□□ -1.1
PTPRD-212ENST00000488774 SASH1O94885 1247 aa8.17□□□□□ -1.1
PTPRD-212ENST00000488774 ATP2B4P23634 1241 aa8.17□□□□□ -1.1
PTPRD-212ENST00000488774 C1QBPQ07021 282 aaKnown RBP8.17□□□□□ -1.1
PTPRD-212ENST00000488774 MVPQ14764 893 aaKnown RBP8.17□□□□□ -1.1
PTPRD-212ENST00000488774 DACT2Q5SW24 774 aa8.17□□□□□ -1.1
PTPRD-212ENST00000488774 SAMD7Q7Z3H4 446 aa8.17□□□□□ -1.1
PTPRD-212ENST00000488774 GPC2Q8N158 579 aa8.17□□□□□ -1.1
PTPRD-212ENST00000488774 FAM84BQ96KN1 310 aaPredicted RBP8.17□□□□□ -1.1
PTPRD-212ENST00000488774 MPHOSPH8Q99549 860 aa8.17□□□□□ -1.1
PTPRD-212ENST00000488774 CNNM1Q9NRU3 951 aa8.17□□□□□ -1.1
PTPRD-212ENST00000488774 ZBTB40Q9NUA8 1239 aa8.17□□□□□ -1.1
PTPRD-212ENST00000488774 PAPPA2Q9BXP8 1791 aa8.17□□□□□ -1.1
PTPRD-212ENST00000488774 EYA2O00167 538 aa8.16□□□□□ -1.1
PTPRD-212ENST00000488774 ZNF609O15014 1411 aa8.16□□□□□ -1.1
PTPRD-212ENST00000488774 IPO8O15397 1037 aaKnown RBP8.16□□□□□ -1.1
PTPRD-212ENST00000488774 SRGAP3O43295 1099 aa8.16□□□□□ -1.1
PTPRD-212ENST00000488774 VIL1P09327 827 aaKnown RBP8.16□□□□□ -1.1
PTPRD-212ENST00000488774 EPHX2P34913 555 aa8.16□□□□□ -1.1
PTPRD-212ENST00000488774 BCAMP50895 628 aa8.16□□□□□ -1.1
PTPRD-212ENST00000488774 TFCP2Q12800 502 aa8.16□□□□□ -1.1
PTPRD-212ENST00000488774 FOCADQ5VW36 1801 aa8.16□□□□□ -1.1
PTPRD-212ENST00000488774 CIAPIN1Q6FI81 312 aa8.16□□□□□ -1.1
PTPRD-212ENST00000488774 CEP85Q6P2H3 762 aa8.16□□□□□ -1.1
PTPRD-212ENST00000488774 KDM2BQ8NHM5 1336 aa8.16□□□□□ -1.1
PTPRD-212ENST00000488774 JDP2Q8WYK2 163 aa8.16□□□□□ -1.1
PTPRD-212ENST00000488774 CD209Q9NNX6 404 aa8.16□□□□□ -1.1
PTPRD-212ENST00000488774 COPRSQ9NQ92 184 aa8.16□□□□□ -1.1
PTPRD-212ENST00000488774 GPRC5DQ9NZD1 345 aa8.16□□□□□ -1.1
PTPRD-212ENST00000488774 LEMD3Q9Y2U8 911 aa8.16□□□□□ -1.1
PTPRD-212ENST00000488774 SIPA1L1O43166 1804 aa8.15□□□□□ -1.1
PTPRD-212ENST00000488774 TRAF5O00463 557 aa8.15□□□□□ -1.1
PTPRD-212ENST00000488774 PDE8BO95263 885 aa8.15□□□□□ -1.1
PTPRD-212ENST00000488774 ITGBL1O95965 494 aaPredicted RBP8.15□□□□□ -1.1
PTPRD-212ENST00000488774 GNAI2P04899 355 aa8.15□□□□□ -1.1
PTPRD-212ENST00000488774 HSP90B1P14625 803 aaKnown RBP8.15□□□□□ -1.1
PTPRD-212ENST00000488774 VEGFAP15692 232 aaPredicted RBP8.15□□□□□ -1.1
PTPRD-212ENST00000488774 RRP1P56182 461 aaKnown RBP8.15□□□□□ -1.1
PTPRD-212ENST00000488774 TIMM10P62072 90 aa8.15□□□□□ -1.1
PTPRD-212ENST00000488774 ATP8B2P98198 1209 aa8.15□□□□□ -1.1
PTPRD-212ENST00000488774 TAF7LQ5H9L4 462 aa8.15□□□□□ -1.1
PTPRD-212ENST00000488774 METTL24Q5JXM2 366 aa8.15□□□□□ -1.1
PTPRD-212ENST00000488774 MAP1SQ66K74 1059 aaPredicted RBP8.15□□□□□ -1.1
PTPRD-212ENST00000488774 C15orf52Q6ZUT6 534 aaKnown RBP8.15□□□□□ -1.1
PTPRD-212ENST00000488774 FBXO33Q7Z6M2 555 aa8.15□□□□□ -1.1
PTPRD-212ENST00000488774 FTSJ3Q8IY81 847 aaKnown RBP8.15□□□□□ -1.1
PTPRD-212ENST00000488774 SUPT20HQ8NEM7 779 aa8.15□□□□□ -1.1
PTPRD-212ENST00000488774 SSH3Q8TE77 659 aa8.15□□□□□ -1.1
PTPRD-212ENST00000488774 CRBNQ96SW2 442 aa8.15□□□□□ -1.1
PTPRD-212ENST00000488774 ZC3H12CQ9C0D7 883 aaKnown RBP8.15□□□□□ -1.1
PTPRD-212ENST00000488774 TLR7Q9NYK1 1049 aaKnown RBP8.15□□□□□ -1.1
PTPRD-212ENST00000488774 AK9Q5TCS8 1911 aa8.14□□□□□ -1.11
PTPRD-212ENST00000488774 TOMM70O94826 608 aa8.14□□□□□ -1.11
PTPRD-212ENST00000488774 GNAI3P08754 354 aa8.14□□□□□ -1.11
PTPRD-212ENST00000488774 IL1R1P14778 569 aa8.14□□□□□ -1.11
PTPRD-212ENST00000488774 PHKA1P46020 1223 aa8.14□□□□□ -1.11
PTPRD-212ENST00000488774 EIF6P56537 245 aaKnown RBP8.14□□□□□ -1.11
PTPRD-212ENST00000488774 GTF2IP78347 998 aa8.14□□□□□ -1.11
PTPRD-212ENST00000488774 SCARF1Q14162 830 aa8.14□□□□□ -1.11
PTPRD-212ENST00000488774 TBC1D10BQ4KMP7 808 aaPredicted RBP8.14□□□□□ -1.11
PTPRD-212ENST00000488774 GRIPAP1Q4V328 841 aa8.14□□□□□ -1.11
PTPRD-212ENST00000488774 EAPPQ56P03 285 aaPredicted RBP8.14□□□□□ -1.11
PTPRD-212ENST00000488774 RSBN1LQ6PCB5 846 aaPredicted RBP8.14□□□□□ -1.11
PTPRD-212ENST00000488774 PI16Q6UXB8 463 aa8.14□□□□□ -1.11
PTPRD-212ENST00000488774 MICALL2Q8IY33 904 aa8.14□□□□□ -1.11
PTPRD-212ENST00000488774 TDRD7Q8NHU6 1098 aaKnown RBP8.14□□□□□ -1.11
PTPRD-212ENST00000488774 ANKRD2Q9GZV1 360 aa8.14□□□□□ -1.11
PTPRD-212ENST00000488774 VPS33BQ9H267 617 aa8.14□□□□□ -1.11
PTPRD-212ENST00000488774 CNOT7Q9UIV1 285 aaKnown RBP8.14□□□□□ -1.11
PTPRD-212ENST00000488774 HACL1Q9UJ83 578 aa8.14□□□□□ -1.11
PTPRD-212ENST00000488774 PCDHB15Q9Y5E8 787 aa8.14□□□□□ -1.11
PTPRD-212ENST00000488774 MAST2Q6P0Q8 1798 aa8.13□□□□□ -1.11
PTPRD-212ENST00000488774 MROH5Q6ZUA9 1318 aa8.13□□□□□ -1.11
PTPRD-212ENST00000488774 PASKQ96RG2 1323 aa8.13□□□□□ -1.11
PTPRD-212ENST00000488774 IRX6P78412 446 aaPredicted RBP8.13□□□□□ -1.11
PTPRD-212ENST00000488774 UBE4AQ14139 1066 aa8.13□□□□□ -1.11
PTPRD-212ENST00000488774 NBPF9Q3BBW0 867 aa8.13□□□□□ -1.11
PTPRD-212ENST00000488774 RBM26Q5T8P6 1007 aaKnown RBP8.13□□□□□ -1.11
PTPRD-212ENST00000488774 DPY19L2Q6NUT2 758 aa8.13□□□□□ -1.11
PTPRD-212ENST00000488774 ZNF384Q8TF68 577 aa8.13□□□□□ -1.11
PTPRD-212ENST00000488774 EYA3Q99504 573 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms