RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 TNNQ9UQP3 1299 aa16.05■□□□□ 0.16
PHF1-210ENST00000488767 EYA2O00167 538 aa16.04■□□□□ 0.16
PHF1-210ENST00000488767 C15orf52Q6ZUT6 534 aaKnown RBP16.04■□□□□ 0.16
PHF1-210ENST00000488767 VPS37DQ86XT2 251 aa16.04■□□□□ 0.16
PHF1-210ENST00000488767 DPF2Q92785 391 aa16.04■□□□□ 0.16
PHF1-210ENST00000488767 PUS3Q9BZE2 481 aaKnown RBP16.04■□□□□ 0.16
PHF1-210ENST00000488767 RIPOR2Q9Y4F9 1068 aa16.04■□□□□ 0.16
PHF1-210ENST00000488767 MYO3BQ8WXR4 1341 aa16.03■□□□□ 0.16
PHF1-210ENST00000488767 CIAO1O76071 339 aa16.03■□□□□ 0.16
PHF1-210ENST00000488767 VIL1P09327 827 aaKnown RBP16.03■□□□□ 0.16
PHF1-210ENST00000488767 HSPA6P17066 643 aa16.03■□□□□ 0.16
PHF1-210ENST00000488767 EPS15P42566 896 aa16.03■□□□□ 0.16
PHF1-210ENST00000488767 LRRC24Q50LG9 513 aa16.03■□□□□ 0.16
PHF1-210ENST00000488767 CAVIN4Q5BKX8 364 aa16.03■□□□□ 0.16
PHF1-210ENST00000488767 AGBL3Q8NEM8 1001 aa16.03■□□□□ 0.16
PHF1-210ENST00000488767 KLHDC4Q8TBB5 520 aa16.03■□□□□ 0.16
PHF1-210ENST00000488767 CNOT7Q9UIV1 285 aaKnown RBP16.03■□□□□ 0.16
PHF1-210ENST00000488767 PDE8BO95263 885 aa16.02■□□□□ 0.16
PHF1-210ENST00000488767 IL15P40933 162 aaPredicted RBP16.02■□□□□ 0.16
PHF1-210ENST00000488767 PTPN12Q05209 780 aaKnown RBP16.02■□□□□ 0.16
PHF1-210ENST00000488767 PUM3Q15397 648 aaKnown RBP16.02■□□□□ 0.16
PHF1-210ENST00000488767 STRIP1Q5VSL9 837 aa16.02■□□□□ 0.16
PHF1-210ENST00000488767 RSBN1LQ6PCB5 846 aaPredicted RBP16.02■□□□□ 0.16
PHF1-210ENST00000488767 MICALL2Q8IY33 904 aa16.02■□□□□ 0.16
PHF1-210ENST00000488767 SIL1Q9H173 461 aa16.02■□□□□ 0.16
PHF1-210ENST00000488767 CEP126Q9P2H0 1117 aa16.02■□□□□ 0.16
PHF1-210ENST00000488767 ZBTB12Q9Y330 459 aaPredicted RBP16.02■□□□□ 0.16
PHF1-210ENST00000488767 WTIPA6NIX2 430 aaPredicted RBP16.01■□□□□ 0.15
PHF1-210ENST00000488767 IFIT1P09914 478 aaKnown RBP16.01■□□□□ 0.15
PHF1-210ENST00000488767 RLBP1P12271 317 aa16.01■□□□□ 0.15
PHF1-210ENST00000488767 RFX5P48382 616 aaPredicted RBP16.01■□□□□ 0.15
PHF1-210ENST00000488767 APLP1P51693 650 aa16.01■□□□□ 0.15
PHF1-210ENST00000488767 MTX1Q13505 466 aa16.01■□□□□ 0.15
PHF1-210ENST00000488767 TXNRD3Q86VQ6 643 aa16.01■□□□□ 0.15
PHF1-210ENST00000488767 OGFOD1Q8N543 542 aa16.01■□□□□ 0.15
PHF1-210ENST00000488767 PANK1Q8TE04 598 aa16.01■□□□□ 0.15
PHF1-210ENST00000488767 CD209Q9NNX6 404 aa16.01■□□□□ 0.15
PHF1-210ENST00000488767 KCNQ5Q9NR82 932 aa16.01■□□□□ 0.15
PHF1-210ENST00000488767 DDX19BQ9UMR2 479 aa16.01■□□□□ 0.15
PHF1-210ENST00000488767 FRAT2O75474 233 aaPredicted RBP16■□□□□ 0.15
PHF1-210ENST00000488767 SLC5A1P13866 664 aa16■□□□□ 0.15
PHF1-210ENST00000488767 KLRK1P26718 216 aa16■□□□□ 0.15
PHF1-210ENST00000488767 HIBADHP31937 336 aaKnown RBP16■□□□□ 0.15
PHF1-210ENST00000488767 MMP14P50281 582 aa16■□□□□ 0.15
PHF1-210ENST00000488767 TTLL5Q6EMB2 1281 aa16■□□□□ 0.15
PHF1-210ENST00000488767 COPRSQ9NQ92 184 aa16■□□□□ 0.15
PHF1-210ENST00000488767 SNAP23O00161 211 aa15.99■□□□□ 0.15
PHF1-210ENST00000488767 ZBTB7BO15156 539 aaPredicted RBP15.99■□□□□ 0.15
PHF1-210ENST00000488767 GTF2IP78347 998 aa15.99■□□□□ 0.15
PHF1-210ENST00000488767 PDE3AQ14432 1141 aa15.99■□□□□ 0.15
PHF1-210ENST00000488767 MVPQ14764 893 aaKnown RBP15.99■□□□□ 0.15
PHF1-210ENST00000488767 LPIN2Q92539 896 aa15.99■□□□□ 0.15
PHF1-210ENST00000488767 HDAC9Q9UKV0 1011 aa15.99■□□□□ 0.15
PHF1-210ENST00000488767 ZNF609O15014 1411 aa15.98■□□□□ 0.15
PHF1-210ENST00000488767 USP17L8P0C7I0 530 aa15.98■□□□□ 0.15
PHF1-210ENST00000488767 POTEIP0CG38 1075 aa15.98■□□□□ 0.15
PHF1-210ENST00000488767 POTEJP0CG39 1038 aa15.98■□□□□ 0.15
PHF1-210ENST00000488767 IL1R1P14778 569 aa15.98■□□□□ 0.15
PHF1-210ENST00000488767 G3BP1Q13283 466 aaKnown RBP eCLIP15.98■□□□□ 0.15
PHF1-210ENST00000488767 ZC3H15Q8WU90 426 aaKnown RBP15.98■□□□□ 0.15
PHF1-210ENST00000488767 GYG1P46976 350 aa15.97■□□□□ 0.15
PHF1-210ENST00000488767 OS9Q13438 667 aaPredicted RBP15.97■□□□□ 0.15
PHF1-210ENST00000488767 ATP2B3Q16720 1220 aa15.97■□□□□ 0.15
PHF1-210ENST00000488767 DACT2Q5SW24 774 aa15.97■□□□□ 0.15
PHF1-210ENST00000488767 VGLL2Q8N8G2 317 aa15.97■□□□□ 0.15
PHF1-210ENST00000488767 PA2G4Q9UQ80 394 aaKnown RBP15.97■□□□□ 0.15
PHF1-210ENST00000488767 AKAP2Q9Y2D5 859 aa15.97■□□□□ 0.15
PHF1-210ENST00000488767 COG6Q9Y2V7 657 aa15.97■□□□□ 0.15
PHF1-210ENST00000488767 A0A1B0GUL6 1792 aa15.97■□□□□ 0.15
PHF1-210ENST00000488767 SASH1O94885 1247 aa15.96■□□□□ 0.15
PHF1-210ENST00000488767 KIF4BQ2VIQ3 1234 aa15.96■□□□□ 0.15
PHF1-210ENST00000488767 TBC1D10BQ4KMP7 808 aaPredicted RBP15.96■□□□□ 0.15
PHF1-210ENST00000488767 RBM26Q5T8P6 1007 aaKnown RBP15.96■□□□□ 0.15
PHF1-210ENST00000488767 MAP1SQ66K74 1059 aaPredicted RBP15.96■□□□□ 0.15
PHF1-210ENST00000488767 ATG9AQ7Z3C6 839 aa15.96■□□□□ 0.15
PHF1-210ENST00000488767 CNTROBQ8N137 903 aa15.96■□□□□ 0.15
PHF1-210ENST00000488767 C1orf115Q9H7X2 142 aa15.96■□□□□ 0.15
PHF1-210ENST00000488767 GNL3LQ9NVN8 582 aaKnown RBP15.96■□□□□ 0.15
PHF1-210ENST00000488767 IRS2Q9Y4H2 1338 aa15.95■□□□□ 0.14
PHF1-210ENST00000488767 PNMA6EA0A0J9YXQ4 647 aa15.95■□□□□ 0.14
PHF1-210ENST00000488767 ATP8B2P98198 1209 aa15.95■□□□□ 0.14
PHF1-210ENST00000488767 SAMD7Q7Z3H4 446 aa15.95■□□□□ 0.14
PHF1-210ENST00000488767 FAM84BQ96KN1 310 aaPredicted RBP15.95■□□□□ 0.14
PHF1-210ENST00000488767 MYOZ2Q9NPC6 264 aa15.95■□□□□ 0.14
PHF1-210ENST00000488767 HMMRO75330 724 aa15.94■□□□□ 0.14
PHF1-210ENST00000488767 FGFR2P21802 821 aa15.94■□□□□ 0.14
PHF1-210ENST00000488767 ZNF280AP59817 542 aaPredicted RBP15.94■□□□□ 0.14
PHF1-210ENST00000488767 FKBP1AP62942 108 aaKnown RBP15.94■□□□□ 0.14
PHF1-210ENST00000488767 TDRD7Q8NHU6 1098 aaKnown RBP15.94■□□□□ 0.14
PHF1-210ENST00000488767 TRPM4Q8TD43 1214 aa15.94■□□□□ 0.14
PHF1-210ENST00000488767 TBC1D22AQ8WUA7 517 aa15.94■□□□□ 0.14
PHF1-210ENST00000488767 DCPSQ96C86 337 aaKnown RBP15.94■□□□□ 0.14
PHF1-210ENST00000488767 GMLQ99445 158 aa15.94■□□□□ 0.14
PHF1-210ENST00000488767 SCN9AQ15858 1988 aa15.93■□□□□ 0.14
PHF1-210ENST00000488767 CDC37L1Q7L3B6 337 aa15.93■□□□□ 0.14
PHF1-210ENST00000488767 FBXO33Q7Z6M2 555 aa15.93■□□□□ 0.14
PHF1-210ENST00000488767 KIAA0825Q8IV33 1275 aa15.93■□□□□ 0.14
PHF1-210ENST00000488767 SSH3Q8TE77 659 aa15.93■□□□□ 0.14
PHF1-210ENST00000488767 PSME4Q14997 1843 aa15.93■□□□□ 0.14
PHF1-210ENST00000488767 FAM205AQ6ZU69 1335 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms