RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 AKAP11Q9UKA4 1901 aa19.04■□□□□ 0.64
RAPGEF3-211ENST00000488250 MBD3O95983 291 aa19.04■□□□□ 0.64
RAPGEF3-211ENST00000488250 PUM3Q15397 648 aaKnown RBP19.04■□□□□ 0.64
RAPGEF3-211ENST00000488250 SLFNL1Q499Z3 407 aa19.04■□□□□ 0.64
RAPGEF3-211ENST00000488250 LPIN2Q92539 896 aa19.04■□□□□ 0.64
RAPGEF3-211ENST00000488250 OSBP2Q969R2 916 aa19.04■□□□□ 0.64
RAPGEF3-211ENST00000488250 CNTNAP4Q9C0A0 1308 aa19.03■□□□□ 0.64
RAPGEF3-211ENST00000488250 M0R2C6 588 aa19.03■□□□□ 0.64
RAPGEF3-211ENST00000488250 HCLS1P14317 486 aaPredicted RBP19.03■□□□□ 0.64
RAPGEF3-211ENST00000488250 ARID4AP29374 1257 aaPredicted RBP19.03■□□□□ 0.64
RAPGEF3-211ENST00000488250 ZNF445P59923 1031 aa19.03■□□□□ 0.64
RAPGEF3-211ENST00000488250 TTF1Q15361 905 aaPredicted RBP19.03■□□□□ 0.64
RAPGEF3-211ENST00000488250 TMEM87AQ8NBN3 555 aa19.03■□□□□ 0.64
RAPGEF3-211ENST00000488250 GPT2Q8TD30 523 aa19.03■□□□□ 0.64
RAPGEF3-211ENST00000488250 APPBP2Q92624 585 aa19.03■□□□□ 0.64
RAPGEF3-211ENST00000488250 NIP7Q9Y221 180 aaKnown RBP eCLIP19.03■□□□□ 0.64
RAPGEF3-211ENST00000488250 ATP6V1DQ9Y5K8 247 aa19.03■□□□□ 0.64
RAPGEF3-211ENST00000488250 THSD7AQ9UPZ6 1657 aa19.03■□□□□ 0.64
RAPGEF3-211ENST00000488250 UQCRFS1P1P0C7P4 283 aa19.02■□□□□ 0.64
RAPGEF3-211ENST00000488250 MCAMP43121 646 aa19.02■□□□□ 0.64
RAPGEF3-211ENST00000488250 CCDC152Q4G0S7 254 aa19.02■□□□□ 0.64
RAPGEF3-211ENST00000488250 F13A1P00488 732 aa19.02■□□□□ 0.63
RAPGEF3-211ENST00000488250 ZSCAN25Q6NSZ9 544 aa19.02■□□□□ 0.63
RAPGEF3-211ENST00000488250 STOX1Q6ZVD7 989 aa19.02■□□□□ 0.63
RAPGEF3-211ENST00000488250 NECAB1Q8N987 351 aa19.02■□□□□ 0.63
RAPGEF3-211ENST00000488250 LINC00116Q8NCU8 138 aa19.02■□□□□ 0.63
RAPGEF3-211ENST00000488250 CHAMP1Q96JM3 812 aa19.02■□□□□ 0.63
RAPGEF3-211ENST00000488250 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.02■□□□□ 0.63
RAPGEF3-211ENST00000488250 GRPEL1Q9HAV7 217 aa19.02■□□□□ 0.63
RAPGEF3-211ENST00000488250 BRPF3Q9ULD4 1205 aa19.02■□□□□ 0.63
RAPGEF3-211ENST00000488250 ATRNO75882 1429 aa19.01■□□□□ 0.63
RAPGEF3-211ENST00000488250 DHX32Q7L7V1 743 aaKnown RBP19.01■□□□□ 0.63
RAPGEF3-211ENST00000488250 TCEANC2Q96MN5 208 aa19.01■□□□□ 0.63
RAPGEF3-211ENST00000488250 CTNNA3Q9UI47 895 aa19.01■□□□□ 0.63
RAPGEF3-211ENST00000488250 MTMR6Q9Y217 621 aa19.01■□□□□ 0.63
RAPGEF3-211ENST00000488250 MYH7P12883 1935 aa19.01■□□□□ 0.63
RAPGEF3-211ENST00000488250 PDCP20941 246 aa19■□□□□ 0.63
RAPGEF3-211ENST00000488250 CCDC102BQ68D86 513 aa19■□□□□ 0.63
RAPGEF3-211ENST00000488250 GAS2L3Q86XJ1 694 aa19■□□□□ 0.63
RAPGEF3-211ENST00000488250 AGXT2Q9BYV1 514 aa19■□□□□ 0.63
RAPGEF3-211ENST00000488250 EXOSC10Q01780 885 aaKnown RBP19■□□□□ 0.63
RAPGEF3-211ENST00000488250 RC3H1Q5TC82 1133 aaKnown RBP19■□□□□ 0.63
RAPGEF3-211ENST00000488250 CAVIN1Q6NZI2 390 aaKnown RBP19■□□□□ 0.63
RAPGEF3-211ENST00000488250 Q6ZUG5 572 aa18.99■□□□□ 0.63
RAPGEF3-211ENST00000488250 FBXL16Q8N461 479 aa18.99■□□□□ 0.63
RAPGEF3-211ENST00000488250 MPHOSPH8Q99549 860 aa18.99■□□□□ 0.63
RAPGEF3-211ENST00000488250 NHSQ6T4R5 1651 aa18.99■□□□□ 0.63
RAPGEF3-211ENST00000488250 LAMA4Q16363 1823 aa18.99■□□□□ 0.63
RAPGEF3-211ENST00000488250 FOXP2O15409 715 aa18.98■□□□□ 0.63
RAPGEF3-211ENST00000488250 SLC5A1P13866 664 aa18.98■□□□□ 0.63
RAPGEF3-211ENST00000488250 ADD2P35612 726 aa18.98■□□□□ 0.63
RAPGEF3-211ENST00000488250 WASHC4Q2M389 1173 aa18.98■□□□□ 0.63
RAPGEF3-211ENST00000488250 ZSCAN23Q3MJ62 389 aa18.98■□□□□ 0.63
RAPGEF3-211ENST00000488250 PI16Q6UXB8 463 aa18.98■□□□□ 0.63
RAPGEF3-211ENST00000488250 GTF3C6Q969F1 213 aa18.98■□□□□ 0.63
RAPGEF3-211ENST00000488250 SCN7AQ01118 1682 aa18.98■□□□□ 0.63
RAPGEF3-211ENST00000488250 E7EWF7 191 aa18.98■□□□□ 0.63
RAPGEF3-211ENST00000488250 NCLP19338 710 aaKnown RBP18.98■□□□□ 0.63
RAPGEF3-211ENST00000488250 UBE3CQ15386 1083 aa18.98■□□□□ 0.63
RAPGEF3-211ENST00000488250 USP21Q9UK80 565 aa18.98■□□□□ 0.63
RAPGEF3-211ENST00000488250 IGHMBP2P38935 993 aaKnown RBP18.97■□□□□ 0.63
RAPGEF3-211ENST00000488250 PHKA1P46020 1223 aa18.97■□□□□ 0.63
RAPGEF3-211ENST00000488250 PUS7LQ9H0K6 701 aaKnown RBP18.97■□□□□ 0.63
RAPGEF3-211ENST00000488250 SEC31BQ9NQW1 1179 aa18.97■□□□□ 0.63
RAPGEF3-211ENST00000488250 FAM177BA6PVY3 158 aa18.96■□□□□ 0.63
RAPGEF3-211ENST00000488250 LARP1BQ659C4 914 aaKnown RBP18.96■□□□□ 0.63
RAPGEF3-211ENST00000488250 USP48Q86UV5 1035 aa18.96■□□□□ 0.63
RAPGEF3-211ENST00000488250 BTAF1O14981 1849 aa18.95■□□□□ 0.62
RAPGEF3-211ENST00000488250 PFKFB2O60825 505 aa18.95■□□□□ 0.62
RAPGEF3-211ENST00000488250 SF3B3Q15393 1217 aaKnown RBP18.95■□□□□ 0.62
RAPGEF3-211ENST00000488250 IMMTQ16891 758 aaKnown RBP18.95■□□□□ 0.62
RAPGEF3-211ENST00000488250 LLPHQ9BRT6 129 aaKnown RBP18.95■□□□□ 0.62
RAPGEF3-211ENST00000488250 PIH1D3Q9NQM4 214 aaKnown RBP18.95■□□□□ 0.62
RAPGEF3-211ENST00000488250 GPAA1O43292 621 aa18.94■□□□□ 0.62
RAPGEF3-211ENST00000488250 RPS6KA4O75676 772 aa18.94■□□□□ 0.62
RAPGEF3-211ENST00000488250 FGAP02671 866 aa18.94■□□□□ 0.62
RAPGEF3-211ENST00000488250 SLC10A5Q5PT55 438 aa18.94■□□□□ 0.62
RAPGEF3-211ENST00000488250 SLC9C2Q5TAH2 1124 aa18.94■□□□□ 0.62
RAPGEF3-211ENST00000488250 HELBQ8NG08 1087 aaPredicted RBP18.94■□□□□ 0.62
RAPGEF3-211ENST00000488250 BRF1Q92994 677 aa18.94■□□□□ 0.62
RAPGEF3-211ENST00000488250 TMEM63CQ9P1W3 806 aa18.94■□□□□ 0.62
RAPGEF3-211ENST00000488250 NSFL1CQ9UNZ2 370 aaKnown RBP18.94■□□□□ 0.62
RAPGEF3-211ENST00000488250 CSPP1Q1MSJ5 1256 aa18.94■□□□□ 0.62
RAPGEF3-211ENST00000488250 SPATA5Q8NB90 893 aa18.94■□□□□ 0.62
RAPGEF3-211ENST00000488250 CDC5LQ99459 802 aaKnown RBP18.94■□□□□ 0.62
RAPGEF3-211ENST00000488250 A0A0G2JLW4 131 aa18.93■□□□□ 0.62
RAPGEF3-211ENST00000488250 EVCP57679 992 aa18.93■□□□□ 0.62
RAPGEF3-211ENST00000488250 TTLL5Q6EMB2 1281 aa18.93■□□□□ 0.62
RAPGEF3-211ENST00000488250 CHMP4CQ96CF2 233 aa18.93■□□□□ 0.62
RAPGEF3-211ENST00000488250 NARFQ9UHQ1 456 aa18.93■□□□□ 0.62
RAPGEF3-211ENST00000488250 CNPY2Q9Y2B0 182 aa18.93■□□□□ 0.62
RAPGEF3-211ENST00000488250 DOCK2Q92608 1830 aa18.93■□□□□ 0.62
RAPGEF3-211ENST00000488250 TCRBV5S4A2TA0A5A2 114 aa18.92■□□□□ 0.62
RAPGEF3-211ENST00000488250 PDE6AP16499 860 aa18.92■□□□□ 0.62
RAPGEF3-211ENST00000488250 FGD1P98174 961 aa18.92■□□□□ 0.62
RAPGEF3-211ENST00000488250 PTF1AQ7RTS3 328 aa18.92■□□□□ 0.62
RAPGEF3-211ENST00000488250 SMARCC2Q8TAQ2 1214 aa18.92■□□□□ 0.62
RAPGEF3-211ENST00000488250 SYAP1Q96A49 352 aaPredicted RBP18.92■□□□□ 0.62
RAPGEF3-211ENST00000488250 PANK2Q9BZ23 570 aa18.92■□□□□ 0.62
RAPGEF3-211ENST00000488250 VPS37CA5D8V6 355 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms