RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ZC3H12CQ9C0D7 883 aaKnown RBP13.7□□□□□ -0.22
UBE4B-210ENST00000488228 EXOC6BQ9Y2D4 811 aa13.7□□□□□ -0.22
UBE4B-210ENST00000488228 PCDHB15Q9Y5E8 787 aa13.7□□□□□ -0.22
UBE4B-210ENST00000488228 HMMRO75330 724 aa13.69□□□□□ -0.22
UBE4B-210ENST00000488228 CENPBP07199 599 aaPredicted RBP13.69□□□□□ -0.22
UBE4B-210ENST00000488228 G3BP1Q13283 466 aaKnown RBP eCLIP13.69□□□□□ -0.22
UBE4B-210ENST00000488228 VPS33BQ9H267 617 aa13.69□□□□□ -0.22
UBE4B-210ENST00000488228 COL1A1P02452 1464 aaPredicted RBP13.68□□□□□ -0.22
UBE4B-210ENST00000488228 FZD9O00144 591 aa13.68□□□□□ -0.22
UBE4B-210ENST00000488228 SASH1O94885 1247 aa13.68□□□□□ -0.22
UBE4B-210ENST00000488228 FGFR2P21802 821 aa13.68□□□□□ -0.22
UBE4B-210ENST00000488228 GYG1P46976 350 aa13.68□□□□□ -0.22
UBE4B-210ENST00000488228 UBE4AQ14139 1066 aa13.68□□□□□ -0.22
UBE4B-210ENST00000488228 ATP2B3Q16720 1220 aa13.68□□□□□ -0.22
UBE4B-210ENST00000488228 CEP126Q9P2H0 1117 aa13.68□□□□□ -0.22
UBE4B-210ENST00000488228 ZNRF3Q9ULT6 936 aa13.68□□□□□ -0.22
UBE4B-210ENST00000488228 MYO5AQ9Y4I1 1855 aaKnown RBP13.67□□□□□ -0.22
UBE4B-210ENST00000488228 AKAP11Q9UKA4 1901 aa13.67□□□□□ -0.22
UBE4B-210ENST00000488228 G3V3G9 751 aa13.67□□□□□ -0.22
UBE4B-210ENST00000488228 APBB1O00213 710 aa13.67□□□□□ -0.22
UBE4B-210ENST00000488228 RAD17O75943 681 aa13.67□□□□□ -0.22
UBE4B-210ENST00000488228 SLC5A1P13866 664 aa13.67□□□□□ -0.22
UBE4B-210ENST00000488228 ADORA1P30542 326 aa13.67□□□□□ -0.22
UBE4B-210ENST00000488228 DCAF8Q5TAQ9 597 aa13.67□□□□□ -0.22
UBE4B-210ENST00000488228 C15orf52Q6ZUT6 534 aaKnown RBP13.67□□□□□ -0.22
UBE4B-210ENST00000488228 KCNQ5Q9NR82 932 aa13.67□□□□□ -0.22
UBE4B-210ENST00000488228 NOP58Q9Y2X3 529 aaKnown RBP13.67□□□□□ -0.22
UBE4B-210ENST00000488228 GJA3Q9Y6H8 435 aa13.67□□□□□ -0.22
UBE4B-210ENST00000488228 DDNO94850 711 aaPredicted RBP13.66□□□□□ -0.22
UBE4B-210ENST00000488228 EIF6P56537 245 aaKnown RBP13.66□□□□□ -0.22
UBE4B-210ENST00000488228 CXCL9Q07325 125 aa13.66□□□□□ -0.22
UBE4B-210ENST00000488228 ZNF804AQ7Z570 1209 aa13.66□□□□□ -0.22
UBE4B-210ENST00000488228 LPIN2Q92539 896 aa13.66□□□□□ -0.22
UBE4B-210ENST00000488228 MAST2Q6P0Q8 1798 aa13.66□□□□□ -0.22
UBE4B-210ENST00000488228 A0A1B0GUL7 405 aa13.65□□□□□ -0.22
UBE4B-210ENST00000488228 GLTPD2A6NH11 291 aa13.65□□□□□ -0.22
UBE4B-210ENST00000488228 IFIT1P09914 478 aaKnown RBP13.65□□□□□ -0.22
UBE4B-210ENST00000488228 CIAPIN1Q6FI81 312 aa13.65□□□□□ -0.22
UBE4B-210ENST00000488228 ZNF784Q8NCA9 323 aaPredicted RBP13.65□□□□□ -0.22
UBE4B-210ENST00000488228 FBXW7Q969H0 707 aa13.65□□□□□ -0.22
UBE4B-210ENST00000488228 FAM84BQ96KN1 310 aaPredicted RBP13.65□□□□□ -0.22
UBE4B-210ENST00000488228 COA1Q9GZY4 146 aa13.65□□□□□ -0.22
UBE4B-210ENST00000488228 IQSEC3Q9UPP2 1182 aaPredicted RBP13.65□□□□□ -0.22
UBE4B-210ENST00000488228 JAG2Q9Y219 1238 aa13.65□□□□□ -0.22
UBE4B-210ENST00000488228 KDM2BQ8NHM5 1336 aa13.64□□□□□ -0.23
UBE4B-210ENST00000488228 ECM29Q5VYK3 1845 aa13.64□□□□□ -0.23
UBE4B-210ENST00000488228 PSMD14O00487 310 aa13.64□□□□□ -0.23
UBE4B-210ENST00000488228 BCAMP50895 628 aa13.64□□□□□ -0.23
UBE4B-210ENST00000488228 TNNI3KQ59H18 835 aa13.64□□□□□ -0.23
UBE4B-210ENST00000488228 GPC2Q8N158 579 aa13.64□□□□□ -0.23
UBE4B-210ENST00000488228 BCL11AQ9H165 835 aa13.64□□□□□ -0.23
UBE4B-210ENST00000488228 CD209Q9NNX6 404 aa13.64□□□□□ -0.23
UBE4B-210ENST00000488228 IL1RAPL2Q9NP60 686 aa13.64□□□□□ -0.23
UBE4B-210ENST00000488228 NMRK2Q9NPI5 230 aa13.64□□□□□ -0.23
UBE4B-210ENST00000488228 FPGT-TNNI3KV9GXZ4 949 aa13.64□□□□□ -0.23
UBE4B-210ENST00000488228 DOCK2Q92608 1830 aa13.64□□□□□ -0.23
UBE4B-210ENST00000488228 HIBADHP31937 336 aaKnown RBP13.63□□□□□ -0.23
UBE4B-210ENST00000488228 PHKA1P46020 1223 aa13.63□□□□□ -0.23
UBE4B-210ENST00000488228 TIMM10P62072 90 aa13.63□□□□□ -0.23
UBE4B-210ENST00000488228 HSP90AB4PQ58FF6 505 aa13.63□□□□□ -0.23
UBE4B-210ENST00000488228 VPS37DQ86XT2 251 aa13.63□□□□□ -0.23
UBE4B-210ENST00000488228 ERC1Q8IUD2 1116 aa13.63□□□□□ -0.23
UBE4B-210ENST00000488228 RHPN1Q8TCX5 695 aa13.63□□□□□ -0.23
UBE4B-210ENST00000488228 XAGE2Q96GT9 111 aa13.63□□□□□ -0.23
UBE4B-210ENST00000488228 NEUROD6Q96NK8 337 aa13.63□□□□□ -0.23
UBE4B-210ENST00000488228 MXD3Q9BW11 206 aa13.63□□□□□ -0.23
UBE4B-210ENST00000488228 TLR7Q9NYK1 1049 aaKnown RBP13.63□□□□□ -0.23
UBE4B-210ENST00000488228 AKAP2Q9Y2D5 859 aa13.63□□□□□ -0.23
UBE4B-210ENST00000488228 IL1R1P14778 569 aa13.62□□□□□ -0.23
UBE4B-210ENST00000488228 GMPSP49915 693 aaPredicted RBP13.62□□□□□ -0.23
UBE4B-210ENST00000488228 AAMPQ13685 434 aa13.62□□□□□ -0.23
UBE4B-210ENST00000488228 CAVIN4Q5BKX8 364 aa13.62□□□□□ -0.23
UBE4B-210ENST00000488228 DPY19L2Q6NUT2 758 aa13.62□□□□□ -0.23
UBE4B-210ENST00000488228 PODNQ7Z5L7 613 aa13.62□□□□□ -0.23
UBE4B-210ENST00000488228 FBXO33Q7Z6M2 555 aa13.62□□□□□ -0.23
UBE4B-210ENST00000488228 DBNDD2Q9BQY9 259 aa13.62□□□□□ -0.23
UBE4B-210ENST00000488228 GPBP1L1Q9HC44 474 aaPredicted RBP13.62□□□□□ -0.23
UBE4B-210ENST00000488228 ZBTB12Q9Y330 459 aaPredicted RBP13.62□□□□□ -0.23
UBE4B-210ENST00000488228 MYH7P12883 1935 aa13.62□□□□□ -0.23
UBE4B-210ENST00000488228 SHTN1A0MZ66 631 aa13.61□□□□□ -0.23
UBE4B-210ENST00000488228 USP17L3A6NCW0 530 aa13.61□□□□□ -0.23
UBE4B-210ENST00000488228 USP17L4A6NCW7 530 aa13.61□□□□□ -0.23
UBE4B-210ENST00000488228 SMARCA5O60264 1052 aaPredicted RBP13.61□□□□□ -0.23
UBE4B-210ENST00000488228 SCNN1DP51172 638 aa13.61□□□□□ -0.23
UBE4B-210ENST00000488228 GTF2IP78347 998 aa13.61□□□□□ -0.23
UBE4B-210ENST00000488228 CHAF1AQ13111 956 aaPredicted RBP13.61□□□□□ -0.23
UBE4B-210ENST00000488228 TNIP1Q15025 636 aa13.61□□□□□ -0.23
UBE4B-210ENST00000488228 DACT2Q5SW24 774 aa13.61□□□□□ -0.23
UBE4B-210ENST00000488228 USP17L1Q7RTZ2 530 aa13.61□□□□□ -0.23
UBE4B-210ENST00000488228 AACSQ86V21 672 aa13.61□□□□□ -0.23
UBE4B-210ENST00000488228 TDRD7Q8NHU6 1098 aaKnown RBP13.61□□□□□ -0.23
UBE4B-210ENST00000488228 EAF2Q96CJ1 260 aaPredicted RBP13.61□□□□□ -0.23
UBE4B-210ENST00000488228 KIF1BPQ96EK5 621 aa13.61□□□□□ -0.23
UBE4B-210ENST00000488228 L3MBTL3Q96JM7 780 aaPredicted RBP13.61□□□□□ -0.23
UBE4B-210ENST00000488228 GPR108Q9NPR9 543 aa13.61□□□□□ -0.23
UBE4B-210ENST00000488228 DBNLQ9UJU6 430 aaKnown RBP13.61□□□□□ -0.23
UBE4B-210ENST00000488228 MYH2Q9UKX2 1941 aa13.6□□□□□ -0.23
UBE4B-210ENST00000488228 HDAC1Q13547 482 aaPredicted RBP13.6□□□□□ -0.23
UBE4B-210ENST00000488228 CCDC102BQ68D86 513 aa13.6□□□□□ -0.23
UBE4B-210ENST00000488228 RSBN1LQ6PCB5 846 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms