RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 FGFR2P21802 821 aa21.31■■□□□ 1
SHROOM1-205ENST00000488072 ADORA1P30542 326 aa21.31■■□□□ 1
SHROOM1-205ENST00000488072 RRAGCQ9HB90 399 aa21.31■■□□□ 1
SHROOM1-205ENST00000488072 EXOC6BQ9Y2D4 811 aa21.31■■□□□ 1
SHROOM1-205ENST00000488072 MED23Q9ULK4 1368 aa21.31■■□□□ 1
SHROOM1-205ENST00000488072 DICER1Q9UPY3 1922 aaKnown RBP21.31■■□□□ 1
SHROOM1-205ENST00000488072 IL15P40933 162 aaPredicted RBP21.3■■□□□ 1
SHROOM1-205ENST00000488072 IQSEC3Q9UPP2 1182 aaPredicted RBP21.3■■□□□ 1
SHROOM1-205ENST00000488072 ZBTB12Q9Y330 459 aaPredicted RBP21.3■■□□□ 1
SHROOM1-205ENST00000488072 PSMD14O00487 310 aa21.29■■□□□ 1
SHROOM1-205ENST00000488072 EIF6P56537 245 aaKnown RBP21.29■■□□□ 1
SHROOM1-205ENST00000488072 FAM84BQ96KN1 310 aaPredicted RBP21.29■■□□□ 1
SHROOM1-205ENST00000488072 VPS33BQ9H267 617 aa21.29■■□□□ 1
SHROOM1-205ENST00000488072 CEP126Q9P2H0 1117 aa21.29■■□□□ 1
SHROOM1-205ENST00000488072 G3V3G9 751 aa21.28■■□□□ 1
SHROOM1-205ENST00000488072 APBB1O00213 710 aa21.28■■□□□ 1
SHROOM1-205ENST00000488072 BCAMP50895 628 aa21.28■■□□□ 1
SHROOM1-205ENST00000488072 TIMM10P62072 90 aa21.28■■□□□ 1
SHROOM1-205ENST00000488072 G3BP1Q13283 466 aaKnown RBP eCLIP21.28■■□□□ 1
SHROOM1-205ENST00000488072 UBE4AQ14139 1066 aa21.28■■□□□ 1
SHROOM1-205ENST00000488072 DCAF8Q5TAQ9 597 aa21.28■■□□□ 1
SHROOM1-205ENST00000488072 BCL11AQ9H165 835 aa21.28■■□□□ 1
SHROOM1-205ENST00000488072 CIAPIN1Q6FI81 312 aa21.27■■□□□ 1
SHROOM1-205ENST00000488072 RPAP2Q8IXW5 612 aaPredicted RBP21.27■■□□□ 1
SHROOM1-205ENST00000488072 FBXW7Q969H0 707 aa21.27■■□□□ 1
SHROOM1-205ENST00000488072 CD209Q9NNX6 404 aa21.27■■□□□ 1
SHROOM1-205ENST00000488072 SCN9AQ15858 1988 aa21.27■□□□□ 0.99
SHROOM1-205ENST00000488072 OS9Q13438 667 aaPredicted RBP21.26■□□□□ 0.99
SHROOM1-205ENST00000488072 PUM3Q15397 648 aaKnown RBP21.26■□□□□ 0.99
SHROOM1-205ENST00000488072 ATP2B3Q16720 1220 aa21.26■□□□□ 0.99
SHROOM1-205ENST00000488072 C15orf52Q6ZUT6 534 aaKnown RBP21.26■□□□□ 0.99
SHROOM1-205ENST00000488072 GPBP1L1Q9HC44 474 aaPredicted RBP21.26■□□□□ 0.99
SHROOM1-205ENST00000488072 NOP58Q9Y2X3 529 aaKnown RBP21.26■□□□□ 0.99
SHROOM1-205ENST00000488072 ZC3H4Q9UPT8 1303 aaKnown RBP21.26■□□□□ 0.99
SHROOM1-205ENST00000488072 GMPSP49915 693 aaPredicted RBP21.25■□□□□ 0.99
SHROOM1-205ENST00000488072 DPY19L2Q6NUT2 758 aa21.25■□□□□ 0.99
SHROOM1-205ENST00000488072 FBXO33Q7Z6M2 555 aa21.25■□□□□ 0.99
SHROOM1-205ENST00000488072 COA1Q9GZY4 146 aa21.25■□□□□ 0.99
SHROOM1-205ENST00000488072 FBXO3Q9UK99 471 aa21.25■□□□□ 0.99
SHROOM1-205ENST00000488072 KIF3CO14782 793 aa21.24■□□□□ 0.99
SHROOM1-205ENST00000488072 EPS15P42566 896 aa21.24■□□□□ 0.99
SHROOM1-205ENST00000488072 SCNN1DP51172 638 aa21.24■□□□□ 0.99
SHROOM1-205ENST00000488072 A0A1B0GUL7 405 aa21.23■□□□□ 0.99
SHROOM1-205ENST00000488072 POTEIP0CG38 1075 aa21.23■□□□□ 0.99
SHROOM1-205ENST00000488072 POTEJP0CG39 1038 aa21.23■□□□□ 0.99
SHROOM1-205ENST00000488072 HIBADHP31937 336 aaKnown RBP21.23■□□□□ 0.99
SHROOM1-205ENST00000488072 GTF2IP78347 998 aa21.23■□□□□ 0.99
SHROOM1-205ENST00000488072 GPC2Q8N158 579 aa21.23■□□□□ 0.99
SHROOM1-205ENST00000488072 LPIN2Q92539 896 aa21.23■□□□□ 0.99
SHROOM1-205ENST00000488072 IL1RAPL2Q9NP60 686 aa21.23■□□□□ 0.99
SHROOM1-205ENST00000488072 SMARCA5O60264 1052 aaPredicted RBP21.22■□□□□ 0.99
SHROOM1-205ENST00000488072 SLC5A1P13866 664 aa21.22■□□□□ 0.99
SHROOM1-205ENST00000488072 PHKA1P46020 1223 aa21.22■□□□□ 0.99
SHROOM1-205ENST00000488072 GRIK5Q16478 980 aa21.22■□□□□ 0.99
SHROOM1-205ENST00000488072 PODNQ7Z5L7 613 aa21.22■□□□□ 0.99
SHROOM1-205ENST00000488072 NEUROD6Q96NK8 337 aa21.22■□□□□ 0.99
SHROOM1-205ENST00000488072 CHMP4BQ9H444 224 aaKnown RBP21.22■□□□□ 0.99
SHROOM1-205ENST00000488072 TLR7Q9NYK1 1049 aaKnown RBP21.22■□□□□ 0.99
SHROOM1-205ENST00000488072 KDM2BQ8NHM5 1336 aa21.22■□□□□ 0.99
SHROOM1-205ENST00000488072 VIL1P09327 827 aaKnown RBP21.21■□□□□ 0.99
SHROOM1-205ENST00000488072 IFIT1P09914 478 aaKnown RBP21.21■□□□□ 0.99
SHROOM1-205ENST00000488072 DACT2Q5SW24 774 aa21.21■□□□□ 0.99
SHROOM1-205ENST00000488072 ZNF804AQ7Z570 1209 aa21.21■□□□□ 0.99
SHROOM1-205ENST00000488072 CERS5Q8N5B7 392 aa21.21■□□□□ 0.99
SHROOM1-205ENST00000488072 TDRD7Q8NHU6 1098 aaKnown RBP21.21■□□□□ 0.99
SHROOM1-205ENST00000488072 XAGE2Q96GT9 111 aa21.21■□□□□ 0.99
SHROOM1-205ENST00000488072 CCDC8Q9H0W5 538 aaPredicted RBP21.21■□□□□ 0.99
SHROOM1-205ENST00000488072 USP17L3A6NCW0 530 aa21.2■□□□□ 0.98
SHROOM1-205ENST00000488072 USP17L4A6NCW7 530 aa21.2■□□□□ 0.98
SHROOM1-205ENST00000488072 EGFRP00533 1210 aa21.2■□□□□ 0.98
SHROOM1-205ENST00000488072 IL1R1P14778 569 aa21.2■□□□□ 0.98
SHROOM1-205ENST00000488072 CHAF1AQ13111 956 aaPredicted RBP21.2■□□□□ 0.98
SHROOM1-205ENST00000488072 TNNI3KQ59H18 835 aa21.2■□□□□ 0.98
SHROOM1-205ENST00000488072 USP17L1Q7RTZ2 530 aa21.2■□□□□ 0.98
SHROOM1-205ENST00000488072 EAF2Q96CJ1 260 aaPredicted RBP21.2■□□□□ 0.98
SHROOM1-205ENST00000488072 L3MBTL3Q96JM7 780 aaPredicted RBP21.2■□□□□ 0.98
SHROOM1-205ENST00000488072 DBNDD2Q9BQY9 259 aa21.2■□□□□ 0.98
SHROOM1-205ENST00000488072 FPGT-TNNI3KV9GXZ4 949 aa21.2■□□□□ 0.98
SHROOM1-205ENST00000488072 ZNF609O15014 1411 aa21.2■□□□□ 0.98
SHROOM1-205ENST00000488072 TNIP1Q15025 636 aa21.19■□□□□ 0.98
SHROOM1-205ENST00000488072 TTLL5Q6EMB2 1281 aa21.19■□□□□ 0.98
SHROOM1-205ENST00000488072 RHPN1Q8TCX5 695 aa21.19■□□□□ 0.98
SHROOM1-205ENST00000488072 COL1A1P02452 1464 aaPredicted RBP21.19■□□□□ 0.98
SHROOM1-205ENST00000488072 HMMRO75330 724 aa21.18■□□□□ 0.98
SHROOM1-205ENST00000488072 RSBN1LQ6PCB5 846 aaPredicted RBP21.18■□□□□ 0.98
SHROOM1-205ENST00000488072 GMLQ99445 158 aa21.18■□□□□ 0.98
SHROOM1-205ENST00000488072 IGHDP01880 384 aa21.17■□□□□ 0.98
SHROOM1-205ENST00000488072 CCDC102BQ68D86 513 aa21.17■□□□□ 0.98
SHROOM1-205ENST00000488072 VPS37DQ86XT2 251 aa21.17■□□□□ 0.98
SHROOM1-205ENST00000488072 TRPM4Q8TD43 1214 aa21.17■□□□□ 0.98
SHROOM1-205ENST00000488072 TAF1DQ9H5J8 278 aaPredicted RBP21.17■□□□□ 0.98
SHROOM1-205ENST00000488072 GPRC5DQ9NZD1 345 aa21.17■□□□□ 0.98
SHROOM1-205ENST00000488072 CNOT7Q9UIV1 285 aaKnown RBP21.17■□□□□ 0.98
SHROOM1-205ENST00000488072 WDR90Q96KV7 1748 aa21.17■□□□□ 0.98
SHROOM1-205ENST00000488072 F8W031 263 aaPredicted RBP21.16■□□□□ 0.98
SHROOM1-205ENST00000488072 VEGFAP15692 232 aaPredicted RBP21.16■□□□□ 0.98
SHROOM1-205ENST00000488072 EPHX2P34913 555 aa21.16■□□□□ 0.98
SHROOM1-205ENST00000488072 SCARF1Q14162 830 aa21.16■□□□□ 0.98
SHROOM1-205ENST00000488072 CAVIN4Q5BKX8 364 aa21.16■□□□□ 0.98
SHROOM1-205ENST00000488072 RBM26Q5T8P6 1007 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms