RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 CCDC77Q9BR77 488 aa17.39■□□□□ 0.37
PKD1-220ENST00000487932 CHPF2Q9P2E5 772 aa17.39■□□□□ 0.37
PKD1-220ENST00000487932 ZYXQ15942 572 aaKnown RBP17.38■□□□□ 0.37
PKD1-220ENST00000487932 SLC9C2Q5TAH2 1124 aa17.38■□□□□ 0.37
PKD1-220ENST00000487932 NACA2Q9H009 215 aa17.38■□□□□ 0.37
PKD1-220ENST00000487932 NSRP1Q9H0G5 558 aaKnown RBP17.38■□□□□ 0.37
PKD1-220ENST00000487932 KCNK9Q9NPC2 374 aa17.38■□□□□ 0.37
PKD1-220ENST00000487932 EHBP1Q8NDI1 1231 aa17.38■□□□□ 0.37
PKD1-220ENST00000487932 XAGE3Q8WTP9 111 aa17.38■□□□□ 0.37
PKD1-220ENST00000487932 ATP6V0A2Q9Y487 856 aa17.38■□□□□ 0.37
PKD1-220ENST00000487932 CLSTN2Q9H4D0 955 aa17.38■□□□□ 0.37
PKD1-220ENST00000487932 RARSP54136 660 aaKnown RBP17.37■□□□□ 0.37
PKD1-220ENST00000487932 AGTPBP1Q9UPW5 1226 aa17.37■□□□□ 0.37
PKD1-220ENST00000487932 RAPGEF1Q13905 1077 aa17.37■□□□□ 0.37
PKD1-220ENST00000487932 PPP1R7Q15435 360 aa17.37■□□□□ 0.37
PKD1-220ENST00000487932 MAGEB6Q8N7X4 407 aa17.37■□□□□ 0.37
PKD1-220ENST00000487932 WASLO00401 505 aaPredicted RBP17.37■□□□□ 0.37
PKD1-220ENST00000487932 ERCC5P28715 1186 aaPredicted RBP17.37■□□□□ 0.37
PKD1-220ENST00000487932 C20orf194Q5TEA3 1177 aa17.37■□□□□ 0.37
PKD1-220ENST00000487932 MSANTD4Q8NCY6 345 aa17.37■□□□□ 0.37
PKD1-220ENST00000487932 RTCBQ9Y3I0 505 aaKnown RBP17.37■□□□□ 0.37
PKD1-220ENST00000487932 DDB1Q16531 1140 aa17.37■□□□□ 0.37
PKD1-220ENST00000487932 CCDC184Q52MB2 194 aa17.37■□□□□ 0.37
PKD1-220ENST00000487932 PKNOX2Q96KN3 472 aa17.37■□□□□ 0.37
PKD1-220ENST00000487932 TOM1O60784 492 aa17.37■□□□□ 0.37
PKD1-220ENST00000487932 BIRC3Q13489 604 aa17.37■□□□□ 0.37
PKD1-220ENST00000487932 CCDC14Q49A88 953 aa17.37■□□□□ 0.37
PKD1-220ENST00000487932 ATRIPQ8WXE1 791 aa17.37■□□□□ 0.37
PKD1-220ENST00000487932 TMCO4Q5TGY1 634 aa17.36■□□□□ 0.37
PKD1-220ENST00000487932 Q6ZUG5 572 aa17.36■□□□□ 0.37
PKD1-220ENST00000487932 TNPO1Q92973 898 aaKnown RBP17.36■□□□□ 0.37
PKD1-220ENST00000487932 PICK1Q9NRD5 415 aa17.36■□□□□ 0.37
PKD1-220ENST00000487932 PPP4R3BQ5MIZ7 849 aa17.36■□□□□ 0.37
PKD1-220ENST00000487932 DZIP3Q86Y13 1208 aaKnown RBP17.36■□□□□ 0.37
PKD1-220ENST00000487932 GMNNO75496 209 aa17.36■□□□□ 0.37
PKD1-220ENST00000487932 KRT79Q5XKE5 535 aa17.36■□□□□ 0.37
PKD1-220ENST00000487932 DAPK3O43293 454 aa17.36■□□□□ 0.37
PKD1-220ENST00000487932 HSPA4P34932 840 aa17.36■□□□□ 0.37
PKD1-220ENST00000487932 PTPRCP08575 1304 aa17.36■□□□□ 0.37
PKD1-220ENST00000487932 GOLGA6L9A6NEM1 432 aa17.36■□□□□ 0.37
PKD1-220ENST00000487932 ATXN8OSP0DMR3 200 aa17.36■□□□□ 0.37
PKD1-220ENST00000487932 KMT5BQ4FZB7 885 aa17.36■□□□□ 0.37
PKD1-220ENST00000487932 ZNF830Q96NB3 372 aaPredicted RBP17.36■□□□□ 0.37
PKD1-220ENST00000487932 E7EVH7 732 aa17.35■□□□□ 0.37
PKD1-220ENST00000487932 PSMA7O14818 248 aa17.35■□□□□ 0.37
PKD1-220ENST00000487932 FBLN1P23142 703 aa17.35■□□□□ 0.37
PKD1-220ENST00000487932 PRPHP41219 470 aa17.35■□□□□ 0.37
PKD1-220ENST00000487932 STX17P56962 302 aa17.35■□□□□ 0.37
PKD1-220ENST00000487932 COPS6Q7L5N1 327 aa17.35■□□□□ 0.37
PKD1-220ENST00000487932 NYXQ9GZU5 481 aa17.35■□□□□ 0.37
PKD1-220ENST00000487932 CNNM2Q9H8M5 875 aa17.35■□□□□ 0.37
PKD1-220ENST00000487932 TMOD4Q9NZQ9 345 aa17.35■□□□□ 0.37
PKD1-220ENST00000487932 RXRAP19793 462 aa17.35■□□□□ 0.37
PKD1-220ENST00000487932 EIF6P56537 245 aaKnown RBP17.35■□□□□ 0.37
PKD1-220ENST00000487932 RPUSD2Q8IZ73 545 aaKnown RBP17.35■□□□□ 0.37
PKD1-220ENST00000487932 FNBP4Q8N3X1 1017 aaPredicted RBP17.35■□□□□ 0.37
PKD1-220ENST00000487932 EPRSP07814 1512 aaKnown RBP17.35■□□□□ 0.37
PKD1-220ENST00000487932 MAEAQ7L5Y9 396 aa17.35■□□□□ 0.37
PKD1-220ENST00000487932 CCDC169A6NNP5 214 aa17.35■□□□□ 0.37
PKD1-220ENST00000487932 SATB1Q01826 763 aa17.35■□□□□ 0.37
PKD1-220ENST00000487932 CABLES1Q8TDN4 633 aa17.35■□□□□ 0.37
PKD1-220ENST00000487932 GPCPD1Q9NPB8 672 aa17.35■□□□□ 0.37
PKD1-220ENST00000487932 IFT81Q8WYA0 676 aa17.35■□□□□ 0.37
PKD1-220ENST00000487932 TRIM6Q9C030 488 aaPredicted RBP17.35■□□□□ 0.37
PKD1-220ENST00000487932 TLDC2A0PJX2 215 aa17.34■□□□□ 0.37
PKD1-220ENST00000487932 KIAA1524Q8TCG1 905 aa17.34■□□□□ 0.37
PKD1-220ENST00000487932 PLEKHH2Q8IVE3 1493 aa17.34■□□□□ 0.37
PKD1-220ENST00000487932 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.34■□□□□ 0.37
PKD1-220ENST00000487932 TTC36A6NLP5 189 aa17.34■□□□□ 0.37
PKD1-220ENST00000487932 NEMFO60524 1076 aa17.34■□□□□ 0.37
PKD1-220ENST00000487932 LPXNO60711 386 aa17.34■□□□□ 0.37
PKD1-220ENST00000487932 GNAQP50148 359 aa17.34■□□□□ 0.37
PKD1-220ENST00000487932 ZNF710Q8N1W2 664 aa17.34■□□□□ 0.37
PKD1-220ENST00000487932 PPP1R9BQ96SB3 815 aa17.34■□□□□ 0.37
PKD1-220ENST00000487932 PPANQ9NQ55 473 aaKnown RBP17.34■□□□□ 0.37
PKD1-220ENST00000487932 MSL1Q68DK7 614 aa17.34■□□□□ 0.37
PKD1-220ENST00000487932 TBC1D9Q6ZT07 1266 aa17.34■□□□□ 0.37
PKD1-220ENST00000487932 CTAGE1Q96RT6 745 aa17.34■□□□□ 0.37
PKD1-220ENST00000487932 NEK11Q8NG66 645 aa17.34■□□□□ 0.37
PKD1-220ENST00000487932 UIMC1Q96RL1 719 aa17.34■□□□□ 0.37
PKD1-220ENST00000487932 ZKSCAN3Q9BRR0 538 aa17.34■□□□□ 0.37
PKD1-220ENST00000487932 KRT2P35908 639 aa17.34■□□□□ 0.37
PKD1-220ENST00000487932 UBXN1Q04323 297 aa17.34■□□□□ 0.37
PKD1-220ENST00000487932 HS2ST1Q7LGA3 356 aa17.34■□□□□ 0.37
PKD1-220ENST00000487932 FNBP1Q96RU3 617 aa17.34■□□□□ 0.37
PKD1-220ENST00000487932 PIK3R4Q99570 1358 aa17.33■□□□□ 0.37
PKD1-220ENST00000487932 DDX39AO00148 427 aaKnown RBP17.33■□□□□ 0.37
PKD1-220ENST00000487932 TACC1O75410 805 aa17.33■□□□□ 0.36
PKD1-220ENST00000487932 ANO6Q4KMQ2 910 aa17.33■□□□□ 0.36
PKD1-220ENST00000487932 DNAJC21Q5F1R6 531 aaKnown RBP17.33■□□□□ 0.36
PKD1-220ENST00000487932 HMG20BQ9P0W2 317 aa17.33■□□□□ 0.36
PKD1-220ENST00000487932 NOL3O60936 208 aaKnown RBP17.33■□□□□ 0.36
PKD1-220ENST00000487932 MYCLP12524 364 aaPredicted RBP17.33■□□□□ 0.36
PKD1-220ENST00000487932 LMBR1LQ6UX01 489 aa17.33■□□□□ 0.36
PKD1-220ENST00000487932 FCHSD1Q86WN1 690 aa17.33■□□□□ 0.36
PKD1-220ENST00000487932 TMTC2Q8N394 836 aa17.33■□□□□ 0.36
PKD1-220ENST00000487932 ATP2A2P16615 1042 aaKnown RBP17.33■□□□□ 0.36
PKD1-220ENST00000487932 MCM6Q14566 821 aa17.33■□□□□ 0.36
PKD1-220ENST00000487932 SEC62Q99442 399 aaKnown RBP17.33■□□□□ 0.36
PKD1-220ENST00000487932 CTAGE15A4D2H0 777 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms