RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 PDE2AO00408 941 aaPredicted RBP7.24□□□□□ -1.25
TTC3-220ENST00000487711 PTPRAP18433 802 aa7.24□□□□□ -1.25
TTC3-220ENST00000487711 TRIM26Q12899 539 aaPredicted RBP7.24□□□□□ -1.25
TTC3-220ENST00000487711 PEAR1Q5VY43 1037 aaPredicted RBP7.24□□□□□ -1.25
TTC3-220ENST00000487711 CCDC74AQ96AQ1 378 aa7.24□□□□□ -1.25
TTC3-220ENST00000487711 HHIPQ96QV1 700 aa7.24□□□□□ -1.25
TTC3-220ENST00000487711 POP1Q99575 1024 aaKnown RBP7.24□□□□□ -1.25
TTC3-220ENST00000487711 NPHS2Q9NP85 383 aa7.24□□□□□ -1.25
TTC3-220ENST00000487711 COL8A1P27658 744 aa7.23□□□□□ -1.25
TTC3-220ENST00000487711 RAC1P63000 192 aa7.23□□□□□ -1.25
TTC3-220ENST00000487711 FMR1Q06787 632 aaKnown RBP eCLIP7.23□□□□□ -1.25
TTC3-220ENST00000487711 KCNMA1Q12791 1236 aa7.23□□□□□ -1.25
TTC3-220ENST00000487711 TRIM28Q13263 835 aaKnown RBP7.23□□□□□ -1.25
TTC3-220ENST00000487711 ENOX2Q16206 610 aaKnown RBP7.23□□□□□ -1.25
TTC3-220ENST00000487711 PRRT3Q5FWE3 981 aa7.23□□□□□ -1.25
TTC3-220ENST00000487711 TMCO4Q5TGY1 634 aa7.23□□□□□ -1.25
TTC3-220ENST00000487711 CACTIN-AS1Q8N1I8 211 aa7.23□□□□□ -1.25
TTC3-220ENST00000487711 A0A1W2PP55 124 aa7.22□□□□□ -1.25
TTC3-220ENST00000487711 FAM229AH3BQW9 127 aa7.22□□□□□ -1.25
TTC3-220ENST00000487711 NFKBIEO00221 500 aa7.22□□□□□ -1.25
TTC3-220ENST00000487711 GADD45BO75293 160 aaPredicted RBP7.22□□□□□ -1.25
TTC3-220ENST00000487711 CDC27P30260 824 aa7.22□□□□□ -1.25
TTC3-220ENST00000487711 ATP2B2Q01814 1243 aa7.22□□□□□ -1.25
TTC3-220ENST00000487711 RASSF7Q02833 373 aa7.22□□□□□ -1.25
TTC3-220ENST00000487711 TMEM102Q8N9M5 508 aaPredicted RBP7.22□□□□□ -1.25
TTC3-220ENST00000487711 ASAP3Q8TDY4 903 aa7.22□□□□□ -1.25
TTC3-220ENST00000487711 EPS8L3Q8TE67 593 aaKnown RBP7.22□□□□□ -1.25
TTC3-220ENST00000487711 NXPE3Q969Y0 559 aa7.22□□□□□ -1.25
TTC3-220ENST00000487711 EHD4Q9H223 541 aa7.22□□□□□ -1.25
TTC3-220ENST00000487711 LIN7BQ9HAP6 207 aa7.22□□□□□ -1.25
TTC3-220ENST00000487711 A0A0A0MRY4 1105 aa7.21□□□□□ -1.26
TTC3-220ENST00000487711 P4HBP07237 508 aaKnown RBP7.21□□□□□ -1.26
TTC3-220ENST00000487711 CDC25BP30305 580 aa7.21□□□□□ -1.26
TTC3-220ENST00000487711 BAG6P46379 1132 aa7.21□□□□□ -1.26
TTC3-220ENST00000487711 DNAJC14Q6Y2X3 702 aaPredicted RBP7.21□□□□□ -1.26
TTC3-220ENST00000487711 MUC3BQ9H195 1237 aa7.21□□□□□ -1.26
TTC3-220ENST00000487711 NLRP2Q9NX02 1062 aa7.21□□□□□ -1.26
TTC3-220ENST00000487711 PPME1Q9Y570 386 aa7.21□□□□□ -1.26
TTC3-220ENST00000487711 SPATA31C1P0DKV0 1188 aa7.2□□□□□ -1.26
TTC3-220ENST00000487711 KIAA0319Q5VV43 1072 aa7.2□□□□□ -1.26
TTC3-220ENST00000487711 ADAMTSL4Q6UY14 1074 aa7.2□□□□□ -1.26
TTC3-220ENST00000487711 ALYREFQ86V81 257 aaKnown RBP7.2□□□□□ -1.26
TTC3-220ENST00000487711 BHLHE41Q9C0J9 482 aaPredicted RBP7.2□□□□□ -1.26
TTC3-220ENST00000487711 SH2B1Q9NRF2 756 aaPredicted RBP7.2□□□□□ -1.26
TTC3-220ENST00000487711 LINC01387J3KSC0 135 aa7.19□□□□□ -1.26
TTC3-220ENST00000487711 GDF11O95390 407 aa7.19□□□□□ -1.26
TTC3-220ENST00000487711 LDHBP07195 334 aaKnown RBP7.19□□□□□ -1.26
TTC3-220ENST00000487711 CABP4P57796 275 aa7.19□□□□□ -1.26
TTC3-220ENST00000487711 ALG1LQ6GMV1 187 aa7.19□□□□□ -1.26
TTC3-220ENST00000487711 FAM117BQ6P1L5 589 aa7.19□□□□□ -1.26
TTC3-220ENST00000487711 TMEM151AQ8N4L1 468 aa7.19□□□□□ -1.26
TTC3-220ENST00000487711 DTWD1Q8N5C7 304 aa7.19□□□□□ -1.26
TTC3-220ENST00000487711 BSNDQ8WZ55 320 aa7.19□□□□□ -1.26
TTC3-220ENST00000487711 DCAF5Q96JK2 942 aa7.19□□□□□ -1.26
TTC3-220ENST00000487711 SETDB2Q96T68 719 aa7.19□□□□□ -1.26
TTC3-220ENST00000487711 ADAM19Q9H013 955 aa7.19□□□□□ -1.26
TTC3-220ENST00000487711 WWC3Q9ULE0 1092 aa7.19□□□□□ -1.26
TTC3-220ENST00000487711 METTL12A8MUP2 240 aa7.18□□□□□ -1.26
TTC3-220ENST00000487711 ELNP15502 786 aa7.18□□□□□ -1.26
TTC3-220ENST00000487711 EPHA1P21709 976 aa7.18□□□□□ -1.26
TTC3-220ENST00000487711 GSK3AP49840 483 aa7.18□□□□□ -1.26
TTC3-220ENST00000487711 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.18□□□□□ -1.26
TTC3-220ENST00000487711 EAPPQ56P03 285 aaPredicted RBP7.18□□□□□ -1.26
TTC3-220ENST00000487711 TXNDC11Q6PKC3 985 aa7.18□□□□□ -1.26
TTC3-220ENST00000487711 PI16Q6UXB8 463 aa7.18□□□□□ -1.26
TTC3-220ENST00000487711 NPAS4Q8IUM7 802 aa7.18□□□□□ -1.26
TTC3-220ENST00000487711 CCNJLQ8IV13 435 aa7.18□□□□□ -1.26
TTC3-220ENST00000487711 FMR1NBQ8N0W7 255 aaPredicted RBP7.18□□□□□ -1.26
TTC3-220ENST00000487711 FBF1Q8TES7 1133 aa7.18□□□□□ -1.26
TTC3-220ENST00000487711 TCF12Q99081 682 aa7.18□□□□□ -1.26
TTC3-220ENST00000487711 ERCC3P19447 782 aa7.17□□□□□ -1.26
TTC3-220ENST00000487711 COL19A1Q14993 1142 aa7.17□□□□□ -1.26
TTC3-220ENST00000487711 GRIK4Q16099 956 aa7.17□□□□□ -1.26
TTC3-220ENST00000487711 ILDR2Q71H61 639 aa7.17□□□□□ -1.26
TTC3-220ENST00000487711 FBXO11Q86XK2 927 aa7.17□□□□□ -1.26
TTC3-220ENST00000487711 SOX13Q9UN79 622 aa7.17□□□□□ -1.26
TTC3-220ENST00000487711 TRAK1Q9UPV9 953 aa7.17□□□□□ -1.26
TTC3-220ENST00000487711 A0A096LPE4 126 aa7.16□□□□□ -1.26
TTC3-220ENST00000487711 A0A1W2PPZ6 126 aa7.16□□□□□ -1.26
TTC3-220ENST00000487711 H3BRJ5 948 aa7.16□□□□□ -1.26
TTC3-220ENST00000487711 DEAF1O75398 565 aaPredicted RBP7.16□□□□□ -1.26
TTC3-220ENST00000487711 APBA3O96018 575 aa7.16□□□□□ -1.26
TTC3-220ENST00000487711 GRIA4P48058 902 aa7.16□□□□□ -1.26
TTC3-220ENST00000487711 GRM2Q14416 872 aa7.16□□□□□ -1.26
TTC3-220ENST00000487711 SETDB1Q15047 1291 aa7.16□□□□□ -1.26
TTC3-220ENST00000487711 SPRED3Q2MJR0 410 aa7.16□□□□□ -1.26
TTC3-220ENST00000487711 MAP4K3Q8IVH8 894 aa7.16□□□□□ -1.26
TTC3-220ENST00000487711 CARD10Q9BWT7 1032 aa7.16□□□□□ -1.26
TTC3-220ENST00000487711 SRA1Q9HD15 236 aaKnown RBP7.16□□□□□ -1.26
TTC3-220ENST00000487711 PPP4R2Q9NY27 417 aa7.16□□□□□ -1.26
TTC3-220ENST00000487711 KRBA1A5PL33 1030 aa7.15□□□□□ -1.26
TTC3-220ENST00000487711 FSCN2O14926 492 aa7.15□□□□□ -1.26
TTC3-220ENST00000487711 MFAP1P55081 439 aaKnown RBP7.15□□□□□ -1.26
TTC3-220ENST00000487711 FGD1P98174 961 aa7.15□□□□□ -1.26
TTC3-220ENST00000487711 VN1R5Q7Z5H4 357 aa7.15□□□□□ -1.26
TTC3-220ENST00000487711 DCAF11Q8TEB1 546 aa7.15□□□□□ -1.26
TTC3-220ENST00000487711 SLC7A3Q8WY07 619 aa7.15□□□□□ -1.26
TTC3-220ENST00000487711 NACC1Q96RE7 527 aa7.15□□□□□ -1.26
TTC3-220ENST00000487711 BCO2Q9BYV7 579 aa7.15□□□□□ -1.26
TTC3-220ENST00000487711 PRPF40AO75400 957 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms