RNA–Protein interactions for RNA: ENST00000487704.5

RTCB-205, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-205ENST00000487704 SYNGAP1Q96PV0 1343 aa10.32□□□□□ -0.76
RTCB-205ENST00000487704 TNFRSF10AO00220 468 aa10.31□□□□□ -0.76
RTCB-205ENST00000487704 MMP14P50281 582 aa10.31□□□□□ -0.76
RTCB-205ENST00000487704 GPSM2P81274 684 aa10.31□□□□□ -0.76
RTCB-205ENST00000487704 CLMNQ96JQ2 1002 aa10.31□□□□□ -0.76
RTCB-205ENST00000487704 ZBTB3Q9H5J0 574 aa10.31□□□□□ -0.76
RTCB-205ENST00000487704 ZFYVE28Q9HCC9 887 aa10.31□□□□□ -0.76
RTCB-205ENST00000487704 PPP1R12BO60237 982 aaPredicted RBP10.3□□□□□ -0.76
RTCB-205ENST00000487704 CCL5P13501 91 aa10.3□□□□□ -0.76
RTCB-205ENST00000487704 HCLS1P14317 486 aaPredicted RBP10.3□□□□□ -0.76
RTCB-205ENST00000487704 GJA5P36382 358 aa10.3□□□□□ -0.76
RTCB-205ENST00000487704 LACTBP83111 547 aaPredicted RBP10.3□□□□□ -0.76
RTCB-205ENST00000487704 KIF22Q14807 665 aa10.3□□□□□ -0.76
RTCB-205ENST00000487704 APOBEC3FQ8IUX4 373 aaKnown RBP10.3□□□□□ -0.76
RTCB-205ENST00000487704 U2AF1L4Q8WU68 220 aaKnown RBP10.3□□□□□ -0.76
RTCB-205ENST00000487704 MS4A4AQ96JQ5 239 aa10.3□□□□□ -0.76
RTCB-205ENST00000487704 RNF208Q9H0X6 261 aa10.3□□□□□ -0.76
RTCB-205ENST00000487704 PODXL2Q9NZ53 605 aa10.3□□□□□ -0.76
RTCB-205ENST00000487704 ARIH1Q9Y4X5 557 aaPredicted RBP10.3□□□□□ -0.76
RTCB-205ENST00000487704 G3V3G9 751 aa10.29□□□□□ -0.76
RTCB-205ENST00000487704 SGPL1O95470 568 aa10.29□□□□□ -0.76
RTCB-205ENST00000487704 DCAF8Q5TAQ9 597 aa10.29□□□□□ -0.76
RTCB-205ENST00000487704 OGFOD1Q8N543 542 aa10.29□□□□□ -0.76
RTCB-205ENST00000487704 LAMA2P24043 3122 aaKnown RBP10.29□□□□□ -0.76
RTCB-205ENST00000487704 USP17L3A6NCW0 530 aa10.28□□□□□ -0.76
RTCB-205ENST00000487704 USP17L4A6NCW7 530 aa10.28□□□□□ -0.76
RTCB-205ENST00000487704 DIAPH1O60610 1272 aaKnown RBP10.28□□□□□ -0.76
RTCB-205ENST00000487704 GRK4P32298 578 aa10.28□□□□□ -0.76
RTCB-205ENST00000487704 MAP3K12Q12852 859 aa10.28□□□□□ -0.76
RTCB-205ENST00000487704 TAF1CQ15572 869 aaPredicted RBP10.28□□□□□ -0.76
RTCB-205ENST00000487704 USP17L1Q7RTZ2 530 aa10.28□□□□□ -0.76
RTCB-205ENST00000487704 ARHGAP39Q9C0H5 1083 aa10.28□□□□□ -0.76
RTCB-205ENST00000487704 FZD1Q9UP38 647 aa10.28□□□□□ -0.76
RTCB-205ENST00000487704 RRP7AQ9Y3A4 280 aaKnown RBP10.28□□□□□ -0.76
RTCB-205ENST00000487704 SSC5DA1L4H1 1573 aa10.27□□□□□ -0.76
RTCB-205ENST00000487704 LAMB2P55268 1798 aa10.27□□□□□ -0.77
RTCB-205ENST00000487704 TLR2O60603 784 aa10.27□□□□□ -0.77
RTCB-205ENST00000487704 PODNQ7Z5L7 613 aa10.27□□□□□ -0.77
RTCB-205ENST00000487704 HELBQ8NG08 1087 aaPredicted RBP10.27□□□□□ -0.77
RTCB-205ENST00000487704 MAFAQ8NHW3 353 aaPredicted RBP10.27□□□□□ -0.77
RTCB-205ENST00000487704 CELF1Q92879 486 aaKnown RBP10.27□□□□□ -0.77
RTCB-205ENST00000487704 SNX27Q96L92 541 aa10.27□□□□□ -0.77
RTCB-205ENST00000487704 TRIM47Q96LD4 638 aa10.27□□□□□ -0.77
RTCB-205ENST00000487704 DEFB129Q9H1M3 183 aa10.27□□□□□ -0.77
RTCB-205ENST00000487704 PANK3Q9H999 370 aa10.27□□□□□ -0.77
RTCB-205ENST00000487704 SRRDQ9UH36 339 aa10.27□□□□□ -0.77
RTCB-205ENST00000487704 RIPOR2Q9Y4F9 1068 aa10.27□□□□□ -0.77
RTCB-205ENST00000487704 IRS2Q9Y4H2 1338 aa10.27□□□□□ -0.77
RTCB-205ENST00000487704 COL1A1P02452 1464 aaPredicted RBP10.26□□□□□ -0.77
RTCB-205ENST00000487704 WDHD1O75717 1129 aaPredicted RBP10.26□□□□□ -0.77
RTCB-205ENST00000487704 HOXD10P28358 340 aa10.26□□□□□ -0.77
RTCB-205ENST00000487704 UBXN2AP68543 259 aa10.26□□□□□ -0.77
RTCB-205ENST00000487704 SF3B3Q15393 1217 aaKnown RBP10.26□□□□□ -0.77
RTCB-205ENST00000487704 ANKRD13AQ8IZ07 590 aa10.26□□□□□ -0.77
RTCB-205ENST00000487704 BRI3BPQ8WY22 251 aa10.26□□□□□ -0.77
RTCB-205ENST00000487704 SH3TC1Q8TE82 1336 aa10.26□□□□□ -0.77
RTCB-205ENST00000487704 PSME4Q14997 1843 aa10.26□□□□□ -0.77
RTCB-205ENST00000487704 TMEM265A0A087WTH1 108 aa10.25□□□□□ -0.77
RTCB-205ENST00000487704 MYL6BP14649 208 aa10.25□□□□□ -0.77
RTCB-205ENST00000487704 MAGEA10P43363 369 aaPredicted RBP10.25□□□□□ -0.77
RTCB-205ENST00000487704 SUPT20HL1Q3ZLR7 823 aa10.25□□□□□ -0.77
RTCB-205ENST00000487704 NLRP10Q86W26 655 aa10.25□□□□□ -0.77
RTCB-205ENST00000487704 ZBED3Q96IU2 234 aaPredicted RBP10.25□□□□□ -0.77
RTCB-205ENST00000487704 UBE2OQ9C0C9 1292 aaKnown RBP10.25□□□□□ -0.77
RTCB-205ENST00000487704 ZCCHC17Q9NP64 241 aaKnown RBP10.25□□□□□ -0.77
RTCB-205ENST00000487704 PPP2R3BQ9Y5P8 575 aa10.25□□□□□ -0.77
RTCB-205ENST00000487704 PIEZO1Q92508 2521 aa10.25□□□□□ -0.77
RTCB-205ENST00000487704 USP2O75604 605 aaPredicted RBP10.24□□□□□ -0.77
RTCB-205ENST00000487704 IREB2P48200 963 aaKnown RBP10.24□□□□□ -0.77
RTCB-205ENST00000487704 GTF2A2P52657 109 aa10.24□□□□□ -0.77
RTCB-205ENST00000487704 RPS8P62241 208 aaKnown RBP10.24□□□□□ -0.77
RTCB-205ENST00000487704 TJAP1Q5JTD0 557 aa10.24□□□□□ -0.77
RTCB-205ENST00000487704 FAM43AQ8N2R8 423 aa10.24□□□□□ -0.77
RTCB-205ENST00000487704 RAET1EQ8TD07 263 aa10.24□□□□□ -0.77
RTCB-205ENST00000487704 CDX2Q99626 313 aaPredicted RBP10.24□□□□□ -0.77
RTCB-205ENST00000487704 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.24□□□□□ -0.77
RTCB-205ENST00000487704 TRMT112Q9UI30 125 aaKnown RBP10.24□□□□□ -0.77
RTCB-205ENST00000487704 ZMYND8Q9ULU4 1186 aaPredicted RBP10.24□□□□□ -0.77
RTCB-205ENST00000487704 FAM205AQ6ZU69 1335 aa10.24□□□□□ -0.77
RTCB-205ENST00000487704 MYO3BQ8WXR4 1341 aa10.24□□□□□ -0.77
RTCB-205ENST00000487704 UFL1O94874 794 aa10.23□□□□□ -0.77
RTCB-205ENST00000487704 SASH1O94885 1247 aa10.23□□□□□ -0.77
RTCB-205ENST00000487704 TFRCP02786 760 aaKnown RBP10.23□□□□□ -0.77
RTCB-205ENST00000487704 TAF7Q15545 349 aaPredicted RBP10.23□□□□□ -0.77
RTCB-205ENST00000487704 HSP90AB3PQ58FF7 597 aa10.23□□□□□ -0.77
RTCB-205ENST00000487704 DACT2Q5SW24 774 aa10.23□□□□□ -0.77
RTCB-205ENST00000487704 LRP10Q7Z4F1 713 aa10.23□□□□□ -0.77
RTCB-205ENST00000487704 NECAB2Q7Z6G3 386 aa10.23□□□□□ -0.77
RTCB-205ENST00000487704 OPTNQ96CV9 577 aa10.23□□□□□ -0.77
RTCB-205ENST00000487704 PAWRQ96IZ0 340 aaKnown RBP10.23□□□□□ -0.77
RTCB-205ENST00000487704 PHACTR3Q96KR7 559 aa10.23□□□□□ -0.77
RTCB-205ENST00000487704 FAM161BQ96MY7 647 aa10.23□□□□□ -0.77
RTCB-205ENST00000487704 CRISPLD2Q9H0B8 497 aa10.23□□□□□ -0.77
RTCB-205ENST00000487704 UNC93B1Q9H1C4 597 aa10.23□□□□□ -0.77
RTCB-205ENST00000487704 BIN2Q9UBW5 565 aaPredicted RBP10.23□□□□□ -0.77
RTCB-205ENST00000487704 GGA1Q9UJY5 639 aa10.23□□□□□ -0.77
RTCB-205ENST00000487704 CCL15-CCL14A0A0B4J2E2 113 aa10.22□□□□□ -0.77
RTCB-205ENST00000487704 OSBPP22059 807 aa10.22□□□□□ -0.77
RTCB-205ENST00000487704 KCNA4P22459 653 aa10.22□□□□□ -0.77
RTCB-205ENST00000487704 CTGFP29279 349 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms