RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 MAP2K2P36507 400 aa11.02□□□□□ -0.65
PRKCB-208ENST00000487674 CCDC152Q4G0S7 254 aa11.02□□□□□ -0.65
PRKCB-208ENST00000487674 CDC37L1Q7L3B6 337 aa11.02□□□□□ -0.65
PRKCB-208ENST00000487674 TBC1D16Q8TBP0 767 aa11.02□□□□□ -0.65
PRKCB-208ENST00000487674 MYD88Q99836 296 aa11.02□□□□□ -0.65
PRKCB-208ENST00000487674 CWC25Q9NXE8 425 aaPredicted RBP11.02□□□□□ -0.65
PRKCB-208ENST00000487674 PODXL2Q9NZ53 605 aa11.02□□□□□ -0.65
PRKCB-208ENST00000487674 ZNF609O15014 1411 aa11.01□□□□□ -0.65
PRKCB-208ENST00000487674 PDE8AO60658 829 aa11.01□□□□□ -0.65
PRKCB-208ENST00000487674 CCDC30Q5VVM6 783 aa11.01□□□□□ -0.65
PRKCB-208ENST00000487674 C8orf58Q8NAV2 365 aa11.01□□□□□ -0.65
PRKCB-208ENST00000487674 METTL22Q9BUU2 404 aaPredicted RBP11.01□□□□□ -0.65
PRKCB-208ENST00000487674 ZNF408Q9H9D4 720 aa11.01□□□□□ -0.65
PRKCB-208ENST00000487674 SEC31BQ9NQW1 1179 aa11.01□□□□□ -0.65
PRKCB-208ENST00000487674 SPEF2Q9C093 1822 aa11□□□□□ -0.65
PRKCB-208ENST00000487674 CA12O43570 354 aa11□□□□□ -0.65
PRKCB-208ENST00000487674 UFL1O94874 794 aa11□□□□□ -0.65
PRKCB-208ENST00000487674 DOK7Q18PE1 504 aa11□□□□□ -0.65
PRKCB-208ENST00000487674 SAMD7Q7Z3H4 446 aa11□□□□□ -0.65
PRKCB-208ENST00000487674 ANKIB1Q9P2G1 1089 aa11□□□□□ -0.65
PRKCB-208ENST00000487674 GGA1Q9UJY5 639 aa11□□□□□ -0.65
PRKCB-208ENST00000487674 AOC2O75106 756 aa10.99□□□□□ -0.65
PRKCB-208ENST00000487674 EGFRP00533 1210 aa10.99□□□□□ -0.65
PRKCB-208ENST00000487674 BRPF1P55201 1214 aaPredicted RBP10.99□□□□□ -0.65
PRKCB-208ENST00000487674 TBC1D10BQ4KMP7 808 aaPredicted RBP10.99□□□□□ -0.65
PRKCB-208ENST00000487674 KRT26Q7Z3Y9 468 aa10.99□□□□□ -0.65
PRKCB-208ENST00000487674 USP48Q86UV5 1035 aa10.99□□□□□ -0.65
PRKCB-208ENST00000487674 ZC3H12CQ9C0D7 883 aaKnown RBP10.99□□□□□ -0.65
PRKCB-208ENST00000487674 MAP3K2Q9Y2U5 619 aa10.99□□□□□ -0.65
PRKCB-208ENST00000487674 XDHP47989 1333 aa10.99□□□□□ -0.65
PRKCB-208ENST00000487674 POLR2AP24928 1970 aaKnown RBP10.98□□□□□ -0.65
PRKCB-208ENST00000487674 G3V3G9 751 aa10.98□□□□□ -0.65
PRKCB-208ENST00000487674 VIL1P09327 827 aaKnown RBP10.98□□□□□ -0.65
PRKCB-208ENST00000487674 CTSWP56202 376 aa10.98□□□□□ -0.65
PRKCB-208ENST00000487674 NOGQ13253 232 aa10.98□□□□□ -0.65
PRKCB-208ENST00000487674 GSE1Q14687 1217 aa10.98□□□□□ -0.65
PRKCB-208ENST00000487674 CCDC27Q2M243 656 aa10.98□□□□□ -0.65
PRKCB-208ENST00000487674 KIF4BQ2VIQ3 1234 aa10.98□□□□□ -0.65
PRKCB-208ENST00000487674 KSR2Q6VAB6 950 aa10.98□□□□□ -0.65
PRKCB-208ENST00000487674 ANKRD18AQ8IVF6 992 aa10.98□□□□□ -0.65
PRKCB-208ENST00000487674 TSPYL6Q8N831 410 aa10.98□□□□□ -0.65
PRKCB-208ENST00000487674 DCPSQ96C86 337 aaKnown RBP10.98□□□□□ -0.65
PRKCB-208ENST00000487674 ABHD8Q96I13 439 aa10.98□□□□□ -0.65
PRKCB-208ENST00000487674 CDC5LQ99459 802 aaKnown RBP10.98□□□□□ -0.65
PRKCB-208ENST00000487674 STK31Q9BXU1 1019 aa10.98□□□□□ -0.65
PRKCB-208ENST00000487674 KCNQ5Q9NR82 932 aa10.98□□□□□ -0.65
PRKCB-208ENST00000487674 PI4KAP2A4QPH2 592 aa10.97□□□□□ -0.65
PRKCB-208ENST00000487674 ADM5C9JUS6 153 aa10.97□□□□□ -0.65
PRKCB-208ENST00000487674 HUNKP57058 714 aa10.97□□□□□ -0.65
PRKCB-208ENST00000487674 NEXNQ0ZGT2 675 aa10.97□□□□□ -0.65
PRKCB-208ENST00000487674 PI4KAP1Q8N8J0 262 aa10.97□□□□□ -0.65
PRKCB-208ENST00000487674 TSR2Q969E8 191 aaKnown RBP10.97□□□□□ -0.65
PRKCB-208ENST00000487674 CCDC85AQ96PX6 553 aaPredicted RBP10.97□□□□□ -0.65
PRKCB-208ENST00000487674 GGA3Q9NZ52 723 aa10.97□□□□□ -0.65
PRKCB-208ENST00000487674 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.97□□□□□ -0.65
PRKCB-208ENST00000487674 ZNF646O15015 1829 aaPredicted RBP10.97□□□□□ -0.65
PRKCB-208ENST00000487674 CACNA1FO60840 1977 aa10.96□□□□□ -0.65
PRKCB-208ENST00000487674 MED23Q9ULK4 1368 aa10.96□□□□□ -0.65
PRKCB-208ENST00000487674 IL16Q14005 1332 aa10.96□□□□□ -0.65
PRKCB-208ENST00000487674 IGKV5-2P06315 115 aa10.96□□□□□ -0.65
PRKCB-208ENST00000487674 ATP2B4P23634 1241 aa10.96□□□□□ -0.65
PRKCB-208ENST00000487674 ZNF280AP59817 542 aaPredicted RBP10.96□□□□□ -0.65
PRKCB-208ENST00000487674 RBM26Q5T8P6 1007 aaKnown RBP10.96□□□□□ -0.65
PRKCB-208ENST00000487674 RSBN1LQ6PCB5 846 aaPredicted RBP10.96□□□□□ -0.65
PRKCB-208ENST00000487674 SULF1Q8IWU6 871 aa10.96□□□□□ -0.65
PRKCB-208ENST00000487674 PDCD7Q8N8D1 485 aaKnown RBP10.96□□□□□ -0.65
PRKCB-208ENST00000487674 AGBL3Q8NEM8 1001 aa10.96□□□□□ -0.65
PRKCB-208ENST00000487674 JARID2Q92833 1246 aaPredicted RBP10.96□□□□□ -0.65
PRKCB-208ENST00000487674 GBA2Q9HCG7 927 aaPredicted RBP10.96□□□□□ -0.65
PRKCB-208ENST00000487674 TSKSQ9UJT2 592 aa10.96□□□□□ -0.65
PRKCB-208ENST00000487674 PAPPA2Q9BXP8 1791 aa10.95□□□□□ -0.66
PRKCB-208ENST00000487674 NEURL1BA8MQ27 555 aa10.95□□□□□ -0.66
PRKCB-208ENST00000487674 TWISTNBQ3B726 338 aaPredicted RBP10.95□□□□□ -0.66
PRKCB-208ENST00000487674 RGMBQ6NW40 437 aa10.95□□□□□ -0.66
PRKCB-208ENST00000487674 DLK2Q6UY11 383 aa10.95□□□□□ -0.66
PRKCB-208ENST00000487674 WWC1Q8IX03 1113 aa10.95□□□□□ -0.66
PRKCB-208ENST00000487674 C2orf69Q8N8R5 385 aa10.95□□□□□ -0.66
PRKCB-208ENST00000487674 TTLL11Q8NHH1 800 aa10.95□□□□□ -0.66
PRKCB-208ENST00000487674 FAM155AB1AL88 458 aaPredicted RBP10.94□□□□□ -0.66
PRKCB-208ENST00000487674 CHRM1P11229 460 aaPredicted RBP10.94□□□□□ -0.66
PRKCB-208ENST00000487674 CWF19L2Q2TBE0 894 aaKnown RBP10.94□□□□□ -0.66
PRKCB-208ENST00000487674 CCDC184Q52MB2 194 aa10.94□□□□□ -0.66
PRKCB-208ENST00000487674 PODNQ7Z5L7 613 aa10.94□□□□□ -0.66
PRKCB-208ENST00000487674 ZNF467Q7Z7K2 595 aaPredicted RBP10.94□□□□□ -0.66
PRKCB-208ENST00000487674 GMLQ99445 158 aa10.94□□□□□ -0.66
PRKCB-208ENST00000487674 GREM2Q9H772 168 aa10.94□□□□□ -0.66
PRKCB-208ENST00000487674 BSDC1Q9NW68 430 aaPredicted RBP10.94□□□□□ -0.66
PRKCB-208ENST00000487674 CASP8AP2Q9UKL3 1982 aa10.94□□□□□ -0.66
PRKCB-208ENST00000487674 ASTN2O75129 1339 aaPredicted RBP10.93□□□□□ -0.66
PRKCB-208ENST00000487674 PITPNM2Q9BZ72 1349 aa10.93□□□□□ -0.66
PRKCB-208ENST00000487674 USP17L3A6NCW0 530 aa10.93□□□□□ -0.66
PRKCB-208ENST00000487674 USP17L4A6NCW7 530 aa10.93□□□□□ -0.66
PRKCB-208ENST00000487674 USP17L8P0C7I0 530 aa10.93□□□□□ -0.66
PRKCB-208ENST00000487674 ANGEL2Q5VTE6 544 aaKnown RBP10.93□□□□□ -0.66
PRKCB-208ENST00000487674 G2E3Q7L622 706 aa10.93□□□□□ -0.66
PRKCB-208ENST00000487674 USP17L1Q7RTZ2 530 aa10.93□□□□□ -0.66
PRKCB-208ENST00000487674 UBE3BQ7Z3V4 1068 aa10.93□□□□□ -0.66
PRKCB-208ENST00000487674 CCDC102AQ96A19 550 aa10.93□□□□□ -0.66
PRKCB-208ENST00000487674 CDCA5Q96FF9 252 aa10.93□□□□□ -0.66
PRKCB-208ENST00000487674 ZIC5Q96T25 663 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms