RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 ZSCAN18Q8TBC5 510 aaPredicted RBP6.78□□□□□ -1.32
USP9X-208ENST00000487625 CHMP7Q8WUX9 453 aaPredicted RBP6.78□□□□□ -1.32
USP9X-208ENST00000487625 SCG3Q8WXD2 468 aaKnown RBP6.78□□□□□ -1.32
USP9X-208ENST00000487625 ZSCAN22P10073 491 aaPredicted RBP6.77□□□□□ -1.33
USP9X-208ENST00000487625 RXRBP28702 533 aa6.77□□□□□ -1.33
USP9X-208ENST00000487625 ECM1Q16610 540 aa6.77□□□□□ -1.33
USP9X-208ENST00000487625 BCL7CQ8WUZ0 217 aaPredicted RBP6.77□□□□□ -1.33
USP9X-208ENST00000487625 RTCBQ9Y3I0 505 aaKnown RBP6.77□□□□□ -1.33
USP9X-208ENST00000487625 XYLBO75191 536 aa6.76□□□□□ -1.33
USP9X-208ENST00000487625 MICAL2O94851 1124 aa6.76□□□□□ -1.33
USP9X-208ENST00000487625 RASA1P20936 1047 aa6.76□□□□□ -1.33
USP9X-208ENST00000487625 EPHA1P21709 976 aa6.76□□□□□ -1.33
USP9X-208ENST00000487625 RAP1GAPP47736 663 aa6.76□□□□□ -1.33
USP9X-208ENST00000487625 SPRED2Q7Z698 418 aa6.76□□□□□ -1.33
USP9X-208ENST00000487625 RUSC1Q9BVN2 902 aa6.76□□□□□ -1.33
USP9X-208ENST00000487625 PRM3Q9NNZ6 103 aa6.76□□□□□ -1.33
USP9X-208ENST00000487625 FAM170BA6NMN3 283 aa6.75□□□□□ -1.33
USP9X-208ENST00000487625 OPLAHO14841 1288 aa6.75□□□□□ -1.33
USP9X-208ENST00000487625 WASHC4Q2M389 1173 aa6.75□□□□□ -1.33
USP9X-208ENST00000487625 CEP135Q66GS9 1140 aa6.75□□□□□ -1.33
USP9X-208ENST00000487625 ZAR1Q86SH2 424 aa6.75□□□□□ -1.33
USP9X-208ENST00000487625 GAS2L2Q8NHY3 880 aa6.75□□□□□ -1.33
USP9X-208ENST00000487625 SEC31BQ9NQW1 1179 aa6.75□□□□□ -1.33
USP9X-208ENST00000487625 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.75□□□□□ -1.33
USP9X-208ENST00000487625 SLC5A6Q9Y289 635 aa6.75□□□□□ -1.33
USP9X-208ENST00000487625 FAM95CA0A1B0GW59 222 aa6.74□□□□□ -1.33
USP9X-208ENST00000487625 DKK1O94907 266 aa6.74□□□□□ -1.33
USP9X-208ENST00000487625 NFKBIBQ15653 356 aa6.74□□□□□ -1.33
USP9X-208ENST00000487625 FAM117BQ6P1L5 589 aa6.74□□□□□ -1.33
USP9X-208ENST00000487625 GATA6Q92908 595 aa6.74□□□□□ -1.33
USP9X-208ENST00000487625 ADAM19Q9H013 955 aa6.74□□□□□ -1.33
USP9X-208ENST00000487625 RC3H2Q9HBD1 1191 aaKnown RBP6.74□□□□□ -1.33
USP9X-208ENST00000487625 TSPAN15O95858 294 aa6.73□□□□□ -1.33
USP9X-208ENST00000487625 ABL2P42684 1182 aa6.73□□□□□ -1.33
USP9X-208ENST00000487625 ATP1A2P50993 1020 aa6.73□□□□□ -1.33
USP9X-208ENST00000487625 DGKZQ13574 1117 aa6.73□□□□□ -1.33
USP9X-208ENST00000487625 COL13A1Q5TAT6 717 aaPredicted RBP6.73□□□□□ -1.33
USP9X-208ENST00000487625 PAOXQ6QHF9 649 aa6.73□□□□□ -1.33
USP9X-208ENST00000487625 TBC1D32Q96NH3 1257 aa6.73□□□□□ -1.33
USP9X-208ENST00000487625 GDPD2Q9HCC8 539 aa6.73□□□□□ -1.33
USP9X-208ENST00000487625 SH2B1Q9NRF2 756 aaPredicted RBP6.73□□□□□ -1.33
USP9X-208ENST00000487625 NLRP12P59046 1061 aa6.72□□□□□ -1.33
USP9X-208ENST00000487625 SIX5Q8N196 739 aa6.72□□□□□ -1.33
USP9X-208ENST00000487625 CSRNP1Q96S65 589 aa6.72□□□□□ -1.33
USP9X-208ENST00000487625 PRKAG2Q9UGJ0 569 aa6.72□□□□□ -1.33
USP9X-208ENST00000487625 ADAMTS6Q9UKP5 1117 aa6.72□□□□□ -1.33
USP9X-208ENST00000487625 KCNMB2Q9Y691 235 aa6.72□□□□□ -1.33
USP9X-208ENST00000487625 MEGF11A6BM72 1044 aa6.71□□□□□ -1.34
USP9X-208ENST00000487625 LRRC10BA6NIK2 292 aa6.71□□□□□ -1.34
USP9X-208ENST00000487625 RNASE1P07998 156 aaKnown RBP6.71□□□□□ -1.34
USP9X-208ENST00000487625 LRRC4CQ9HCJ2 640 aa6.71□□□□□ -1.34
USP9X-208ENST00000487625 MBNL3Q9NUK0 354 aaKnown RBP6.71□□□□□ -1.34
USP9X-208ENST00000487625 SMNDC1O75940 238 aaKnown RBP eCLIP6.7□□□□□ -1.341e-9■□□□□ 9.5
USP9X-208ENST00000487625 TIAF1O95411 115 aa6.7□□□□□ -1.34
USP9X-208ENST00000487625 INHBBP09529 407 aa6.7□□□□□ -1.34
USP9X-208ENST00000487625 CDPF1Q6NVV7 123 aa6.7□□□□□ -1.34
USP9X-208ENST00000487625 CMTR1Q8N1G2 835 aaKnown RBP6.7□□□□□ -1.34
USP9X-208ENST00000487625 LARGE2Q8N3Y3 721 aa6.7□□□□□ -1.34
USP9X-208ENST00000487625 OGFOD1Q8N543 542 aa6.7□□□□□ -1.34
USP9X-208ENST00000487625 FBLIM1Q8WUP2 373 aa6.7□□□□□ -1.34
USP9X-208ENST00000487625 ZMYND15Q9H091 742 aa6.7□□□□□ -1.34
USP9X-208ENST00000487625 FUT4P22083 530 aa6.69□□□□□ -1.34
USP9X-208ENST00000487625 CTSWP56202 376 aa6.69□□□□□ -1.34
USP9X-208ENST00000487625 RGL4Q8IZJ4 473 aa6.69□□□□□ -1.34
USP9X-208ENST00000487625 LRRN4CLQ8ND94 238 aa6.69□□□□□ -1.34
USP9X-208ENST00000487625 IL27Q8NEV9 243 aa6.69□□□□□ -1.34
USP9X-208ENST00000487625 RASSF4Q9H2L5 321 aa6.69□□□□□ -1.34
USP9X-208ENST00000487625 PALM3A6NDB9 673 aaPredicted RBP6.68□□□□□ -1.34
USP9X-208ENST00000487625 CRTC2Q53ET0 693 aaPredicted RBP6.68□□□□□ -1.34
USP9X-208ENST00000487625 QTRT2Q9H974 415 aaKnown RBP6.68□□□□□ -1.34
USP9X-208ENST00000487625 PIP4K2BP78356 416 aa6.67□□□□□ -1.34
USP9X-208ENST00000487625 KRTAP1-1Q07627 177 aa6.67□□□□□ -1.34
USP9X-208ENST00000487625 BNIP3Q12983 259 aa6.67□□□□□ -1.34
USP9X-208ENST00000487625 ZNF765Q7L2R6 523 aa6.67□□□□□ -1.34
USP9X-208ENST00000487625 STK11IPQ8N1F8 1099 aa6.67□□□□□ -1.34
USP9X-208ENST00000487625 C12orf50Q8NA57 414 aaPredicted RBP6.67□□□□□ -1.34
USP9X-208ENST00000487625 WNT8BQ93098 351 aa6.67□□□□□ -1.34
USP9X-208ENST00000487625 ZNF594Q96JF6 807 aaPredicted RBP6.67□□□□□ -1.34
USP9X-208ENST00000487625 ALG2Q9H553 416 aa6.67□□□□□ -1.34
USP9X-208ENST00000487625 H3BRJ5 948 aa6.66□□□□□ -1.34
USP9X-208ENST00000487625 MLANAQ16655 118 aa6.66□□□□□ -1.34
USP9X-208ENST00000487625 ANKLE2Q86XL3 938 aa6.66□□□□□ -1.34
USP9X-208ENST00000487625 PLEKHM2Q8IWE5 1019 aa6.66□□□□□ -1.34
USP9X-208ENST00000487625 SMG8Q8ND04 991 aaKnown RBP6.66□□□□□ -1.34
USP9X-208ENST00000487625 OR13H1Q8NG92 308 aa6.66□□□□□ -1.34
USP9X-208ENST00000487625 TMPRSS13Q9BYE2 586 aa6.66□□□□□ -1.34
USP9X-208ENST00000487625 OSGEPQ9NPF4 335 aa6.66□□□□□ -1.34
USP9X-208ENST00000487625 USP17L3A6NCW0 530 aa6.65□□□□□ -1.34
USP9X-208ENST00000487625 USP17L4A6NCW7 530 aa6.65□□□□□ -1.34
USP9X-208ENST00000487625 ZNF503-AS2A6NEH8 195 aa6.65□□□□□ -1.34
USP9X-208ENST00000487625 TRIP4Q15650 581 aaPredicted RBP6.65□□□□□ -1.34
USP9X-208ENST00000487625 DUSP27Q5VZP5 1158 aa6.65□□□□□ -1.34
USP9X-208ENST00000487625 USP17L2Q6R6M4 530 aa6.65□□□□□ -1.34
USP9X-208ENST00000487625 USP17L1Q7RTZ2 530 aa6.65□□□□□ -1.34
USP9X-208ENST00000487625 NLRP13Q86W25 1043 aa6.65□□□□□ -1.34
USP9X-208ENST00000487625 EZH1Q92800 747 aaPredicted RBP6.65□□□□□ -1.34
USP9X-208ENST00000487625 C20orf173Q96LM9 149 aa6.65□□□□□ -1.34
USP9X-208ENST00000487625 PPP1R16BQ96T49 567 aa6.65□□□□□ -1.34
USP9X-208ENST00000487625 SUGCTQ9HAC7 445 aa6.65□□□□□ -1.34
USP9X-208ENST00000487625 FAM53CQ9NYF3 392 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms