RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 FBXO3Q9UK99 471 aa12.89□□□□□ -0.35
RNF220-215ENST00000487332 UBTFL1P0CB47 393 aaPredicted RBP12.88□□□□□ -0.35
RNF220-215ENST00000487332 KCNJ4P48050 445 aa12.88□□□□□ -0.35
RNF220-215ENST00000487332 CNTROBQ8N137 903 aa12.88□□□□□ -0.35
RNF220-215ENST00000487332 KLRG1Q96E93 195 aa12.88□□□□□ -0.35
RNF220-215ENST00000487332 GMLQ99445 158 aa12.88□□□□□ -0.35
RNF220-215ENST00000487332 CLEC11AQ9Y240 323 aa12.88□□□□□ -0.35
RNF220-215ENST00000487332 ZBTB12Q9Y330 459 aaPredicted RBP12.88□□□□□ -0.35
RNF220-215ENST00000487332 RIPOR2Q9Y4F9 1068 aa12.88□□□□□ -0.35
RNF220-215ENST00000487332 ARAP2Q8WZ64 1704 aa12.88□□□□□ -0.35
RNF220-215ENST00000487332 GNAI3P08754 354 aa12.87□□□□□ -0.35
RNF220-215ENST00000487332 IL1R1P14778 569 aa12.87□□□□□ -0.35
RNF220-215ENST00000487332 RFX5P48382 616 aaPredicted RBP12.87□□□□□ -0.35
RNF220-215ENST00000487332 FKBP1AP62942 108 aaKnown RBP12.87□□□□□ -0.35
RNF220-215ENST00000487332 DACT2Q5SW24 774 aa12.87□□□□□ -0.35
RNF220-215ENST00000487332 TXNRD3Q86VQ6 643 aa12.87□□□□□ -0.35
RNF220-215ENST00000487332 JMYQ8N9B5 988 aa12.87□□□□□ -0.35
RNF220-215ENST00000487332 TRPM4Q8TD43 1214 aa12.87□□□□□ -0.35
RNF220-215ENST00000487332 ZNF594Q96JF6 807 aaPredicted RBP12.87□□□□□ -0.35
RNF220-215ENST00000487332 KCNQ5Q9NR82 932 aa12.87□□□□□ -0.35
RNF220-215ENST00000487332 THSD7BQ9C0I4 1608 aa12.87□□□□□ -0.35
RNF220-215ENST00000487332 TMEM88BA6NKF7 163 aa12.86□□□□□ -0.35
RNF220-215ENST00000487332 BCAR3O75815 825 aa12.86□□□□□ -0.35
RNF220-215ENST00000487332 KLRK1P26718 216 aa12.86□□□□□ -0.35
RNF220-215ENST00000487332 HIRAP54198 1017 aaPredicted RBP12.86□□□□□ -0.35
RNF220-215ENST00000487332 MTX1Q13505 466 aa12.86□□□□□ -0.35
RNF220-215ENST00000487332 MAP1SQ66K74 1059 aaPredicted RBP12.86□□□□□ -0.35
RNF220-215ENST00000487332 ZNF804AQ7Z570 1209 aa12.86□□□□□ -0.35
RNF220-215ENST00000487332 VGLL2Q8N8G2 317 aa12.86□□□□□ -0.35
RNF220-215ENST00000487332 CD209Q9NNX6 404 aa12.86□□□□□ -0.35
RNF220-215ENST00000487332 PITPNM2Q9BZ72 1349 aa12.86□□□□□ -0.35
RNF220-215ENST00000487332 CNTNAP1P78357 1384 aa12.85□□□□□ -0.35
RNF220-215ENST00000487332 WTIPA6NIX2 430 aaPredicted RBP12.85□□□□□ -0.35
RNF220-215ENST00000487332 TAF5LO75529 589 aa12.85□□□□□ -0.35
RNF220-215ENST00000487332 CIAO1O76071 339 aa12.85□□□□□ -0.35
RNF220-215ENST00000487332 KIF4BQ2VIQ3 1234 aa12.85□□□□□ -0.35
RNF220-215ENST00000487332 ZKSCAN2Q63HK3 967 aa12.85□□□□□ -0.35
RNF220-215ENST00000487332 MEIS3Q99687 375 aa12.85□□□□□ -0.35
RNF220-215ENST00000487332 ZBTB22O15209 634 aa12.84□□□□□ -0.35
RNF220-215ENST00000487332 USP17L8P0C7I0 530 aa12.84□□□□□ -0.35
RNF220-215ENST00000487332 PTPN12Q05209 780 aaKnown RBP12.84□□□□□ -0.35
RNF220-215ENST00000487332 CDC37L1Q7L3B6 337 aa12.84□□□□□ -0.35
RNF220-215ENST00000487332 SHTN1A0MZ66 631 aa12.83□□□□□ -0.36
RNF220-215ENST00000487332 RASSF10A6NK89 507 aa12.83□□□□□ -0.36
RNF220-215ENST00000487332 EYA2O00167 538 aa12.83□□□□□ -0.36
RNF220-215ENST00000487332 PDE8BO95263 885 aa12.83□□□□□ -0.36
RNF220-215ENST00000487332 LRRC24Q50LG9 513 aa12.83□□□□□ -0.36
RNF220-215ENST00000487332 METTL24Q5JXM2 366 aa12.83□□□□□ -0.36
RNF220-215ENST00000487332 TTLL5Q6EMB2 1281 aa12.83□□□□□ -0.36
RNF220-215ENST00000487332 SAMD7Q7Z3H4 446 aa12.83□□□□□ -0.36
RNF220-215ENST00000487332 HELBQ8NG08 1087 aaPredicted RBP12.83□□□□□ -0.36
RNF220-215ENST00000487332 PUS3Q9BZE2 481 aaKnown RBP12.83□□□□□ -0.36
RNF220-215ENST00000487332 LRRFIP2Q9Y608 721 aaKnown RBP12.83□□□□□ -0.36
RNF220-215ENST00000487332 COL1A1P02452 1464 aaPredicted RBP12.83□□□□□ -0.36
RNF220-215ENST00000487332 FAM205AQ6ZU69 1335 aa12.83□□□□□ -0.36
RNF220-215ENST00000487332 TRPM7Q96QT4 1865 aa12.82□□□□□ -0.36
RNF220-215ENST00000487332 EGFRP00533 1210 aa12.82□□□□□ -0.36
RNF220-215ENST00000487332 FGFR2P21802 821 aa12.82□□□□□ -0.36
RNF220-215ENST00000487332 HTRA3P83110 453 aa12.82□□□□□ -0.36
RNF220-215ENST00000487332 PUM3Q15397 648 aaKnown RBP12.82□□□□□ -0.36
RNF220-215ENST00000487332 TBC1D10BQ4KMP7 808 aaPredicted RBP12.82□□□□□ -0.36
RNF220-215ENST00000487332 OGFOD1Q8N543 542 aa12.82□□□□□ -0.36
RNF220-215ENST00000487332 TDRD7Q8NHU6 1098 aaKnown RBP12.82□□□□□ -0.36
RNF220-215ENST00000487332 FRAT1Q92837 279 aaPredicted RBP12.82□□□□□ -0.36
RNF220-215ENST00000487332 HHIPL1Q96JK4 782 aa12.82□□□□□ -0.36
RNF220-215ENST00000487332 MYOZ2Q9NPC6 264 aa12.82□□□□□ -0.36
RNF220-215ENST00000487332 COPRSQ9NQ92 184 aa12.82□□□□□ -0.36
RNF220-215ENST00000487332 HDAC9Q9UKV0 1011 aa12.82□□□□□ -0.36
RNF220-215ENST00000487332 SNAP23O00161 211 aa12.81□□□□□ -0.36
RNF220-215ENST00000487332 SASH1O94885 1247 aa12.81□□□□□ -0.36
RNF220-215ENST00000487332 HIBADHP31937 336 aaKnown RBP12.81□□□□□ -0.36
RNF220-215ENST00000487332 GTF2IP78347 998 aa12.81□□□□□ -0.36
RNF220-215ENST00000487332 MTMR14Q8NCE2 650 aa12.81□□□□□ -0.36
RNF220-215ENST00000487332 GGA3Q9NZ52 723 aa12.81□□□□□ -0.36
RNF220-215ENST00000487332 CEP350Q5VT06 3117 aa12.81□□□□□ -0.36
RNF220-215ENST00000487332 GNAI2P04899 355 aa12.8□□□□□ -0.36
RNF220-215ENST00000487332 IL15P40933 162 aaPredicted RBP12.8□□□□□ -0.36
RNF220-215ENST00000487332 ATG9AQ7Z3C6 839 aa12.8□□□□□ -0.36
RNF220-215ENST00000487332 FBXO33Q7Z6M2 555 aa12.8□□□□□ -0.36
RNF220-215ENST00000487332 DZIP1LQ8IYY4 767 aaKnown RBP12.8□□□□□ -0.36
RNF220-215ENST00000487332 TMEM57Q8N5G2 664 aa12.8□□□□□ -0.36
RNF220-215ENST00000487332 KLHDC4Q8TBB5 520 aa12.8□□□□□ -0.36
RNF220-215ENST00000487332 LPIN2Q92539 896 aa12.8□□□□□ -0.36
RNF220-215ENST00000487332 DCPSQ96C86 337 aaKnown RBP12.8□□□□□ -0.36
RNF220-215ENST00000487332 ZBED3Q96IU2 234 aaPredicted RBP12.8□□□□□ -0.36
RNF220-215ENST00000487332 FAM84BQ96KN1 310 aaPredicted RBP12.8□□□□□ -0.36
RNF220-215ENST00000487332 GLIS2Q9BZE0 524 aaPredicted RBP12.8□□□□□ -0.36
RNF220-215ENST00000487332 TLL2Q9Y6L7 1015 aa12.8□□□□□ -0.36
RNF220-215ENST00000487332 PLIN1O60240 522 aa12.79□□□□□ -0.36
RNF220-215ENST00000487332 IFIT1P09914 478 aaKnown RBP12.79□□□□□ -0.36
RNF220-215ENST00000487332 MS4A1P11836 297 aa12.79□□□□□ -0.36
RNF220-215ENST00000487332 CAVIN4Q5BKX8 364 aa12.79□□□□□ -0.36
RNF220-215ENST00000487332 CST9Q5W186 159 aa12.79□□□□□ -0.36
RNF220-215ENST00000487332 KRT26Q7Z3Y9 468 aa12.79□□□□□ -0.36
RNF220-215ENST00000487332 FTSJ3Q8IY81 847 aaKnown RBP12.79□□□□□ -0.36
RNF220-215ENST00000487332 TNNQ9UQP3 1299 aa12.79□□□□□ -0.36
RNF220-215ENST00000487332 TRAF5O00463 557 aa12.78□□□□□ -0.36
RNF220-215ENST00000487332 WNT10BO00744 389 aa12.78□□□□□ -0.36
RNF220-215ENST00000487332 SLC5A1P13866 664 aa12.78□□□□□ -0.36
RNF220-215ENST00000487332 GYG1P46976 350 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms