RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 LDHDQ86WU2 507 aa12.78□□□□□ -0.36
NEK4-204ENST00000487068 ITPRIPQ8IWB1 547 aa12.78□□□□□ -0.36
NEK4-204ENST00000487068 HELBQ8NG08 1087 aaPredicted RBP12.78□□□□□ -0.36
NEK4-204ENST00000487068 AIDAQ96BJ3 306 aa12.78□□□□□ -0.36
NEK4-204ENST00000487068 KAZALD1Q96I82 304 aa12.78□□□□□ -0.36
NEK4-204ENST00000487068 L3MBTL3Q96JM7 780 aaPredicted RBP12.78□□□□□ -0.36
NEK4-204ENST00000487068 MEIS3Q99687 375 aa12.78□□□□□ -0.36
NEK4-204ENST00000487068 PRDM10Q9NQV6 1147 aa12.78□□□□□ -0.36
NEK4-204ENST00000487068 LRRFIP2Q9Y608 721 aaKnown RBP12.78□□□□□ -0.36
NEK4-204ENST00000487068 ZNF804BA4D1E1 1349 aa12.78□□□□□ -0.36
NEK4-204ENST00000487068 ADAMTSL1Q8N6G6 1762 aa12.78□□□□□ -0.36
NEK4-204ENST00000487068 TAF5LO75529 589 aa12.77□□□□□ -0.37
NEK4-204ENST00000487068 GNAI3P08754 354 aa12.77□□□□□ -0.37
NEK4-204ENST00000487068 CXCL9Q07325 125 aa12.77□□□□□ -0.37
NEK4-204ENST00000487068 INTS3Q68E01 1043 aaKnown RBP12.77□□□□□ -0.37
NEK4-204ENST00000487068 ANKRD44Q8N8A2 993 aa12.77□□□□□ -0.37
NEK4-204ENST00000487068 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.37
NEK4-204ENST00000487068 LEMD3Q9Y2U8 911 aa12.77□□□□□ -0.37
NEK4-204ENST00000487068 PASKQ96RG2 1323 aa12.77□□□□□ -0.37
NEK4-204ENST00000487068 YDJCA8MPS7 323 aa12.76□□□□□ -0.37
NEK4-204ENST00000487068 EPHX2P34913 555 aa12.76□□□□□ -0.37
NEK4-204ENST00000487068 CTCFP49711 727 aaPredicted RBP12.76□□□□□ -0.37
NEK4-204ENST00000487068 RABL6Q3YEC7 729 aaPredicted RBP12.76□□□□□ -0.37
NEK4-204ENST00000487068 DZIP1LQ8IYY4 767 aaKnown RBP12.76□□□□□ -0.37
NEK4-204ENST00000487068 TMEM57Q8N5G2 664 aa12.76□□□□□ -0.37
NEK4-204ENST00000487068 KLHDC4Q8TBB5 520 aa12.76□□□□□ -0.37
NEK4-204ENST00000487068 TAF1DQ9H5J8 278 aaPredicted RBP12.76□□□□□ -0.37
NEK4-204ENST00000487068 RCAN3Q9UKA8 241 aa12.76□□□□□ -0.37
NEK4-204ENST00000487068 TMEM88BA6NKF7 163 aa12.75□□□□□ -0.37
NEK4-204ENST00000487068 PSMD14O00487 310 aa12.75□□□□□ -0.37
NEK4-204ENST00000487068 GMPSP49915 693 aaPredicted RBP12.75□□□□□ -0.37
NEK4-204ENST00000487068 METTL24Q5JXM2 366 aa12.75□□□□□ -0.37
NEK4-204ENST00000487068 SIL1Q9H173 461 aa12.75□□□□□ -0.37
NEK4-204ENST00000487068 MROH5Q6ZUA9 1318 aa12.74□□□□□ -0.37
NEK4-204ENST00000487068 WTIPA6NIX2 430 aaPredicted RBP12.74□□□□□ -0.37
NEK4-204ENST00000487068 KLRK1P26718 216 aa12.74□□□□□ -0.37
NEK4-204ENST00000487068 VEGFBP49765 207 aa12.74□□□□□ -0.37
NEK4-204ENST00000487068 SCNN1DP51172 638 aa12.74□□□□□ -0.37
NEK4-204ENST00000487068 PNMA8AQ86V59 439 aaPredicted RBP12.74□□□□□ -0.37
NEK4-204ENST00000487068 PUS3Q9BZE2 481 aaKnown RBP12.74□□□□□ -0.37
NEK4-204ENST00000487068 ZBTB12Q9Y330 459 aaPredicted RBP12.74□□□□□ -0.37
NEK4-204ENST00000487068 SNAP23O00161 211 aa12.73□□□□□ -0.37
NEK4-204ENST00000487068 GNAI2P04899 355 aa12.73□□□□□ -0.37
NEK4-204ENST00000487068 MS4A1P11836 297 aa12.73□□□□□ -0.37
NEK4-204ENST00000487068 EPS15P42566 896 aa12.73□□□□□ -0.37
NEK4-204ENST00000487068 LRRC24Q50LG9 513 aa12.73□□□□□ -0.37
NEK4-204ENST00000487068 ZNF804AQ7Z570 1209 aa12.73□□□□□ -0.37
NEK4-204ENST00000487068 COA1Q9GZY4 146 aa12.73□□□□□ -0.37
NEK4-204ENST00000487068 GPRC5DQ9NZD1 345 aa12.73□□□□□ -0.37
NEK4-204ENST00000487068 H7C1D1 291 aa12.72□□□□□ -0.37
NEK4-204ENST00000487068 SRGAP3O43295 1099 aa12.72□□□□□ -0.37
NEK4-204ENST00000487068 ITGBL1O95965 494 aaPredicted RBP12.72□□□□□ -0.37
NEK4-204ENST00000487068 PODNQ7Z5L7 613 aa12.72□□□□□ -0.37
NEK4-204ENST00000487068 TXNRD3Q86VQ6 643 aa12.72□□□□□ -0.37
NEK4-204ENST00000487068 MICALL2Q8IY33 904 aa12.72□□□□□ -0.37
NEK4-204ENST00000487068 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.72□□□□□ -0.37
NEK4-204ENST00000487068 KCNQ5Q9NR82 932 aa12.72□□□□□ -0.37
NEK4-204ENST00000487068 ADARB2Q9NS39 739 aaKnown RBP12.72□□□□□ -0.37
NEK4-204ENST00000487068 WBP1LQ9NX94 342 aa12.72□□□□□ -0.37
NEK4-204ENST00000487068 USP17L3A6NCW0 530 aa12.71□□□□□ -0.37
NEK4-204ENST00000487068 USP17L4A6NCW7 530 aa12.71□□□□□ -0.37
NEK4-204ENST00000487068 RLBP1P12271 317 aa12.71□□□□□ -0.37
NEK4-204ENST00000487068 RPS12P25398 132 aaKnown RBP12.71□□□□□ -0.37
NEK4-204ENST00000487068 LBX1P52954 281 aa12.71□□□□□ -0.37
NEK4-204ENST00000487068 USP17L1Q7RTZ2 530 aa12.71□□□□□ -0.37
NEK4-204ENST00000487068 VPS37DQ86XT2 251 aa12.71□□□□□ -0.37
NEK4-204ENST00000487068 PANK1Q8TE04 598 aa12.71□□□□□ -0.37
NEK4-204ENST00000487068 C1orf115Q9H7X2 142 aa12.71□□□□□ -0.37
NEK4-204ENST00000487068 CNOT7Q9UIV1 285 aaKnown RBP12.71□□□□□ -0.37
NEK4-204ENST00000487068 RASSF10A6NK89 507 aa12.7□□□□□ -0.38
NEK4-204ENST00000487068 EYA2O00167 538 aa12.7□□□□□ -0.38
NEK4-204ENST00000487068 FRAT2O75474 233 aaPredicted RBP12.7□□□□□ -0.38
NEK4-204ENST00000487068 UBE4AQ14139 1066 aa12.7□□□□□ -0.38
NEK4-204ENST00000487068 DEFB115Q30KQ5 88 aa12.7□□□□□ -0.38
NEK4-204ENST00000487068 RBM26Q5T8P6 1007 aaKnown RBP12.7□□□□□ -0.38
NEK4-204ENST00000487068 USP50Q70EL3 339 aaPredicted RBP12.7□□□□□ -0.38
NEK4-204ENST00000487068 PA2G4Q9UQ80 394 aaKnown RBP12.7□□□□□ -0.38
NEK4-204ENST00000487068 AK9Q5TCS8 1911 aa12.69□□□□□ -0.38
NEK4-204ENST00000487068 SHTN1A0MZ66 631 aa12.69□□□□□ -0.38
NEK4-204ENST00000487068 RFX5P48382 616 aaPredicted RBP12.69□□□□□ -0.38
NEK4-204ENST00000487068 GTF2IP78347 998 aa12.69□□□□□ -0.38
NEK4-204ENST00000487068 MAP2K1Q02750 393 aaPredicted RBP12.69□□□□□ -0.38
NEK4-204ENST00000487068 PTPN12Q05209 780 aaKnown RBP12.69□□□□□ -0.38
NEK4-204ENST00000487068 PUM3Q15397 648 aaKnown RBP12.69□□□□□ -0.38
NEK4-204ENST00000487068 TBC1D10BQ4KMP7 808 aaPredicted RBP12.69□□□□□ -0.38
NEK4-204ENST00000487068 CAVIN4Q5BKX8 364 aa12.69□□□□□ -0.38
NEK4-204ENST00000487068 MAP1SQ66K74 1059 aaPredicted RBP12.69□□□□□ -0.38
NEK4-204ENST00000487068 RSBN1LQ6PCB5 846 aaPredicted RBP12.69□□□□□ -0.38
NEK4-204ENST00000487068 RIPOR2Q9Y4F9 1068 aa12.69□□□□□ -0.38
NEK4-204ENST00000487068 MYO3BQ8WXR4 1341 aa12.68□□□□□ -0.38
NEK4-204ENST00000487068 PDE8BO95263 885 aa12.68□□□□□ -0.38
NEK4-204ENST00000487068 VIL1P09327 827 aaKnown RBP12.68□□□□□ -0.38
NEK4-204ENST00000487068 IFIT1P09914 478 aaKnown RBP12.68□□□□□ -0.38
NEK4-204ENST00000487068 HSPA8P11142 646 aaKnown RBP12.68□□□□□ -0.38
NEK4-204ENST00000487068 SLC5A1P13866 664 aa12.68□□□□□ -0.38
NEK4-204ENST00000487068 GYG1P46976 350 aa12.68□□□□□ -0.38
NEK4-204ENST00000487068 OS9Q13438 667 aaPredicted RBP12.68□□□□□ -0.38
NEK4-204ENST00000487068 TTLL5Q6EMB2 1281 aa12.68□□□□□ -0.38
NEK4-204ENST00000487068 CNTROBQ8N137 903 aa12.68□□□□□ -0.38
NEK4-204ENST00000487068 AGBL3Q8NEM8 1001 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms