RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 RIPK4P57078 832 aa9.96□□□□□ -0.82
PDPN-205ENST00000487038 NBPF9Q3BBW0 867 aa9.96□□□□□ -0.82
PDPN-205ENST00000487038 HDGFL1Q5TGJ6 251 aa9.96□□□□□ -0.82
PDPN-205ENST00000487038 PRAMEF18Q5VWM3 479 aa9.96□□□□□ -0.82
PDPN-205ENST00000487038 SPRYD7Q5W111 196 aa9.96□□□□□ -0.82
PDPN-205ENST00000487038 OTUD7BQ6GQQ9 843 aa9.96□□□□□ -0.82
PDPN-205ENST00000487038 FBXW7Q969H0 707 aa9.96□□□□□ -0.82
PDPN-205ENST00000487038 GMLQ99445 158 aa9.96□□□□□ -0.82
PDPN-205ENST00000487038 TMEM106CQ9BVX2 250 aa9.96□□□□□ -0.82
PDPN-205ENST00000487038 DBF4Q9UBU7 674 aaPredicted RBP9.96□□□□□ -0.82
PDPN-205ENST00000487038 SCAF8Q9UPN6 1271 aaKnown RBP9.96□□□□□ -0.82
PDPN-205ENST00000487038 A0A1B0GUL6 1792 aa9.96□□□□□ -0.82
PDPN-205ENST00000487038 HOXB7P09629 217 aa9.95□□□□□ -0.82
PDPN-205ENST00000487038 PTPN12Q05209 780 aaKnown RBP9.95□□□□□ -0.82
PDPN-205ENST00000487038 PRKG1Q13976 671 aa9.95□□□□□ -0.82
PDPN-205ENST00000487038 IFNL1Q8IU54 200 aa9.95□□□□□ -0.82
PDPN-205ENST00000487038 ANKRD18AQ8IVF6 992 aa9.95□□□□□ -0.82
PDPN-205ENST00000487038 ZBTB38Q8NAP3 1195 aaPredicted RBP9.95□□□□□ -0.82
PDPN-205ENST00000487038 HYPKQ9NX55 129 aa9.95□□□□□ -0.82
PDPN-205ENST00000487038 ANGEL1Q9UNK9 670 aaKnown RBP9.95□□□□□ -0.82
PDPN-205ENST00000487038 PTPN22Q9Y2R2 807 aa9.95□□□□□ -0.82
PDPN-205ENST00000487038 ARAP2Q8WZ64 1704 aa9.94□□□□□ -0.82
PDPN-205ENST00000487038 GOLGA2Q08379 1002 aa9.94□□□□□ -0.82
PDPN-205ENST00000487038 TRIM28Q13263 835 aaKnown RBP9.94□□□□□ -0.82
PDPN-205ENST00000487038 ARHGEF6Q15052 776 aa9.94□□□□□ -0.82
PDPN-205ENST00000487038 NBPF11Q86T75 865 aa9.94□□□□□ -0.82
PDPN-205ENST00000487038 ARMC5Q96C12 935 aa9.94□□□□□ -0.82
PDPN-205ENST00000487038 EFCC1Q9HA90 598 aa9.94□□□□□ -0.82
PDPN-205ENST00000487038 SEC31BQ9NQW1 1179 aa9.94□□□□□ -0.82
PDPN-205ENST00000487038 UNCXA6NJT0 531 aa9.93□□□□□ -0.82
PDPN-205ENST00000487038 PPP1R12BO60237 982 aaPredicted RBP9.93□□□□□ -0.82
PDPN-205ENST00000487038 PDE8AO60658 829 aa9.93□□□□□ -0.82
PDPN-205ENST00000487038 SASH1O94885 1247 aa9.93□□□□□ -0.82
PDPN-205ENST00000487038 DACT2Q5SW24 774 aa9.93□□□□□ -0.82
PDPN-205ENST00000487038 LDLRAD1Q5T700 205 aa9.93□□□□□ -0.82
PDPN-205ENST00000487038 STRIP1Q5VSL9 837 aa9.93□□□□□ -0.82
PDPN-205ENST00000487038 RIC3Q7Z5B4 369 aa9.93□□□□□ -0.82
PDPN-205ENST00000487038 CD99L2Q8TCZ2 262 aa9.93□□□□□ -0.82
PDPN-205ENST00000487038 SLC10A4Q96EP9 437 aa9.93□□□□□ -0.82
PDPN-205ENST00000487038 CDC5LQ99459 802 aaKnown RBP9.93□□□□□ -0.82
PDPN-205ENST00000487038 R3HDMLQ9H3Y0 253 aa9.93□□□□□ -0.82
PDPN-205ENST00000487038 COLQQ9Y215 455 aaPredicted RBP9.93□□□□□ -0.82
PDPN-205ENST00000487038 PPP2R3BQ9Y5P8 575 aa9.93□□□□□ -0.82
PDPN-205ENST00000487038 EN2P19622 333 aaPredicted RBP9.92□□□□□ -0.82
PDPN-205ENST00000487038 SP3Q02447 781 aa9.92□□□□□ -0.82
PDPN-205ENST00000487038 MAP3K11Q16584 847 aa9.92□□□□□ -0.82
PDPN-205ENST00000487038 SLC9C1Q4G0N8 1177 aa9.92□□□□□ -0.82
PDPN-205ENST00000487038 WNK4Q96J92 1243 aa9.92□□□□□ -0.82
PDPN-205ENST00000487038 COA1Q9GZY4 146 aa9.92□□□□□ -0.82
PDPN-205ENST00000487038 IGF2BP3O00425 579 aaKnown RBP eCLIP9.91□□□□□ -0.82
PDPN-205ENST00000487038 MYO1BO43795 1136 aa9.91□□□□□ -0.82
PDPN-205ENST00000487038 PCCAP05165 728 aaPredicted RBP9.91□□□□□ -0.82
PDPN-205ENST00000487038 TMPOP42166 694 aaKnown RBP9.91□□□□□ -0.82
PDPN-205ENST00000487038 CCDC191Q8NCU4 936 aa9.91□□□□□ -0.82
PDPN-205ENST00000487038 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.91□□□□□ -0.82
PDPN-205ENST00000487038 LAS1LQ9Y4W2 734 aaKnown RBP9.91□□□□□ -0.82
PDPN-205ENST00000487038 SSC5DA1L4H1 1573 aa9.9□□□□□ -0.82
PDPN-205ENST00000487038 IREB2P48200 963 aaKnown RBP9.9□□□□□ -0.82
PDPN-205ENST00000487038 CCT4P50991 539 aaKnown RBP9.9□□□□□ -0.82
PDPN-205ENST00000487038 CRHR2Q13324 411 aa9.9□□□□□ -0.82
PDPN-205ENST00000487038 KRT24Q2M2I5 525 aa9.9□□□□□ -0.82
PDPN-205ENST00000487038 SLC4A8Q2Y0W8 1093 aa9.9□□□□□ -0.82
PDPN-205ENST00000487038 SUPT20HL1Q3ZLR7 823 aa9.9□□□□□ -0.82
PDPN-205ENST00000487038 KIAA0825Q8IV33 1275 aa9.9□□□□□ -0.82
PDPN-205ENST00000487038 ZNF333Q96JL9 665 aa9.9□□□□□ -0.82
PDPN-205ENST00000487038 CCDC85AQ96PX6 553 aaPredicted RBP9.9□□□□□ -0.82
PDPN-205ENST00000487038 MYD88Q99836 296 aa9.9□□□□□ -0.82
PDPN-205ENST00000487038 DEFB129Q9H1M3 183 aa9.9□□□□□ -0.82
PDPN-205ENST00000487038 CWC25Q9NXE8 425 aaPredicted RBP9.9□□□□□ -0.82
PDPN-205ENST00000487038 ZSWIM8A7E2V4 1837 aa9.9□□□□□ -0.82
PDPN-205ENST00000487038 COL6A3P12111 3177 aa9.89□□□□□ -0.83
PDPN-205ENST00000487038 CHL1O00533 1208 aa9.89□□□□□ -0.83
PDPN-205ENST00000487038 WDHD1O75717 1129 aaPredicted RBP9.89□□□□□ -0.83
PDPN-205ENST00000487038 DDX58O95786 925 aaKnown RBP9.89□□□□□ -0.83
PDPN-205ENST00000487038 DLGAP5Q15398 846 aa9.89□□□□□ -0.83
PDPN-205ENST00000487038 TTLL5Q6EMB2 1281 aa9.89□□□□□ -0.83
PDPN-205ENST00000487038 ANKRD13AQ8IZ07 590 aa9.89□□□□□ -0.83
PDPN-205ENST00000487038 MXD3Q9BW11 206 aa9.89□□□□□ -0.83
PDPN-205ENST00000487038 BSDC1Q9NW68 430 aaPredicted RBP9.89□□□□□ -0.83
PDPN-205ENST00000487038 LEMD3Q9Y2U8 911 aa9.89□□□□□ -0.83
PDPN-205ENST00000487038 ZNF804BA4D1E1 1349 aa9.88□□□□□ -0.83
PDPN-205ENST00000487038 IGHMBP2P38935 993 aaKnown RBP9.88□□□□□ -0.83
PDPN-205ENST00000487038 CTSWP56202 376 aa9.88□□□□□ -0.83
PDPN-205ENST00000487038 NEUROD2Q15784 382 aa9.88□□□□□ -0.83
PDPN-205ENST00000487038 MINPP1Q9UNW1 487 aa9.88□□□□□ -0.83
PDPN-205ENST00000487038 FZD1Q9UP38 647 aa9.88□□□□□ -0.83
PDPN-205ENST00000487038 LAMA3Q16787 3333 aa9.88□□□□□ -0.83
PDPN-205ENST00000487038 DLL1O00548 723 aa9.87□□□□□ -0.83
PDPN-205ENST00000487038 KCNJ4P48050 445 aa9.87□□□□□ -0.83
PDPN-205ENST00000487038 KIF22Q14807 665 aa9.87□□□□□ -0.83
PDPN-205ENST00000487038 CHRDL2Q6WN34 429 aa9.87□□□□□ -0.83
PDPN-205ENST00000487038 ZBED3Q96IU2 234 aaPredicted RBP9.87□□□□□ -0.83
PDPN-205ENST00000487038 CLMNQ96JQ2 1002 aa9.87□□□□□ -0.83
PDPN-205ENST00000487038 CHMP4AQ9BY43 222 aa9.87□□□□□ -0.83
PDPN-205ENST00000487038 ANKRD2Q9GZV1 360 aa9.87□□□□□ -0.83
PDPN-205ENST00000487038 ZFYVE28Q9HCC9 887 aa9.87□□□□□ -0.83
PDPN-205ENST00000487038 MGAMO43451 1857 aa9.87□□□□□ -0.83
PDPN-205ENST00000487038 TESPA1A2RU30 521 aaPredicted RBP9.86□□□□□ -0.83
PDPN-205ENST00000487038 H0YGN5 161 aa9.86□□□□□ -0.83
PDPN-205ENST00000487038 GTF2IP78347 998 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms