RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 FSTP19883 344 aa8.49□□□□□ -1.05
SMC4-218ENST00000486711 EPHA1P21709 976 aa8.49□□□□□ -1.05
SMC4-218ENST00000486711 MZF1P28698 734 aaPredicted RBP8.49□□□□□ -1.05
SMC4-218ENST00000486711 ALKBH2Q6NS38 261 aa8.49□□□□□ -1.05
SMC4-218ENST00000486711 ACAD11Q709F0 780 aa8.49□□□□□ -1.05
SMC4-218ENST00000486711 CEP41Q9BYV8 373 aa8.49□□□□□ -1.05
SMC4-218ENST00000486711 ADAM19Q9H013 955 aa8.49□□□□□ -1.05
SMC4-218ENST00000486711 CNTN3Q9P232 1028 aa8.49□□□□□ -1.05
SMC4-218ENST00000486711 SALL4Q9UJQ4 1053 aa8.49□□□□□ -1.05
SMC4-218ENST00000486711 WISP1O95388 367 aa8.48□□□□□ -1.05
SMC4-218ENST00000486711 CES1P23141 567 aa8.48□□□□□ -1.05
SMC4-218ENST00000486711 MPSTP25325 297 aa8.48□□□□□ -1.05
SMC4-218ENST00000486711 CDC25BP30305 580 aa8.48□□□□□ -1.05
SMC4-218ENST00000486711 EIF1AXP47813 144 aaKnown RBP8.48□□□□□ -1.05
SMC4-218ENST00000486711 CABP4P57796 275 aa8.48□□□□□ -1.05
SMC4-218ENST00000486711 C8orf34Q49A92 452 aa8.48□□□□□ -1.05
SMC4-218ENST00000486711 ADAMTSL4Q6UY14 1074 aa8.48□□□□□ -1.05
SMC4-218ENST00000486711 GTF3C2Q8WUA4 911 aaPredicted RBP8.48□□□□□ -1.05
SMC4-218ENST00000486711 PMEPA1Q969W9 287 aa8.48□□□□□ -1.05
SMC4-218ENST00000486711 POP1Q99575 1024 aaKnown RBP8.48□□□□□ -1.05
SMC4-218ENST00000486711 CARD10Q9BWT7 1032 aa8.48□□□□□ -1.05
SMC4-218ENST00000486711 SH2B1Q9NRF2 756 aaPredicted RBP8.48□□□□□ -1.05
SMC4-218ENST00000486711 TMEM88BA6NKF7 163 aa8.47□□□□□ -1.05
SMC4-218ENST00000486711 H3BRJ5 948 aa8.47□□□□□ -1.05
SMC4-218ENST00000486711 SSFA2P28290 1259 aa8.47□□□□□ -1.05
SMC4-218ENST00000486711 C1orf127Q8N9H9 656 aa8.47□□□□□ -1.05
SMC4-218ENST00000486711 WNT8BQ93098 351 aa8.47□□□□□ -1.05
SMC4-218ENST00000486711 SEC31BQ9NQW1 1179 aa8.47□□□□□ -1.05
SMC4-218ENST00000486711 RAXQ9Y2V3 346 aa8.47□□□□□ -1.05
SMC4-218ENST00000486711 TM4SF5O14894 197 aa8.46□□□□□ -1.06
SMC4-218ENST00000486711 GSC2O15499 205 aa8.46□□□□□ -1.06
SMC4-218ENST00000486711 PIP4K2BP78356 416 aa8.46□□□□□ -1.06
SMC4-218ENST00000486711 DUOXA2Q1HG44 320 aa8.46□□□□□ -1.06
SMC4-218ENST00000486711 UVSSAQ2YD98 709 aa8.46□□□□□ -1.06
SMC4-218ENST00000486711 UBL7Q96S82 380 aaPredicted RBP8.46□□□□□ -1.06
SMC4-218ENST00000486711 GGNBP2Q9H3C7 697 aa8.46□□□□□ -1.06
SMC4-218ENST00000486711 KCNK4Q9NYG8 393 aa8.46□□□□□ -1.06
SMC4-218ENST00000486711 MTMR7Q9Y216 660 aa8.46□□□□□ -1.06
SMC4-218ENST00000486711 DHX15O43143 795 aaKnown RBP8.45□□□□□ -1.06
SMC4-218ENST00000486711 PSMG3-AS1Q96PY0 264 aa8.45□□□□□ -1.06
SMC4-218ENST00000486711 KRTAP4-8Q9BYQ9 185 aa8.45□□□□□ -1.06
SMC4-218ENST00000486711 DZANK1Q9NVP4 752 aa8.45□□□□□ -1.06
SMC4-218ENST00000486711 A6NHS1 94 aa8.44□□□□□ -1.06
SMC4-218ENST00000486711 PDE2AO00408 941 aaPredicted RBP8.44□□□□□ -1.06
SMC4-218ENST00000486711 KIAA1211Q6ZU35 1233 aa8.44□□□□□ -1.06
SMC4-218ENST00000486711 FOXD4L4Q8WXT5 416 aaPredicted RBP8.44□□□□□ -1.06
SMC4-218ENST00000486711 CHRDQ9H2X0 955 aa8.44□□□□□ -1.06
SMC4-218ENST00000486711 OSGEPQ9NPF4 335 aa8.44□□□□□ -1.06
SMC4-218ENST00000486711 POLIQ9UNA4 740 aa8.44□□□□□ -1.06
SMC4-218ENST00000486711 NFKBIEO00221 500 aa8.43□□□□□ -1.06
SMC4-218ENST00000486711 FAM13AO94988 1023 aa8.43□□□□□ -1.06
SMC4-218ENST00000486711 ACPPP15309 386 aa8.43□□□□□ -1.06
SMC4-218ENST00000486711 NPR3P17342 541 aa8.43□□□□□ -1.06
SMC4-218ENST00000486711 EHHADHQ08426 723 aa8.43□□□□□ -1.06
SMC4-218ENST00000486711 AAMPQ13685 434 aa8.43□□□□□ -1.06
SMC4-218ENST00000486711 UTP4Q969X6 686 aaKnown RBP8.43□□□□□ -1.06
SMC4-218ENST00000486711 KLHDC7BQ96G42 594 aa8.43□□□□□ -1.06
SMC4-218ENST00000486711 STOML1Q9UBI4 398 aa8.43□□□□□ -1.06
SMC4-218ENST00000486711 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.43□□□□□ -1.06
SMC4-218ENST00000486711 ADAM11O75078 769 aa8.42□□□□□ -1.06
SMC4-218ENST00000486711 IGLV1-40P01703 118 aa8.42□□□□□ -1.06
SMC4-218ENST00000486711 USP5P45974 858 aa8.42□□□□□ -1.06
SMC4-218ENST00000486711 MTMR3Q13615 1198 aa8.42□□□□□ -1.06
SMC4-218ENST00000486711 ARMC10Q8N2F6 343 aa8.42□□□□□ -1.06
SMC4-218ENST00000486711 TMEM102Q8N9M5 508 aaPredicted RBP8.42□□□□□ -1.06
SMC4-218ENST00000486711 SNX29Q8TEQ0 813 aa8.42□□□□□ -1.06
SMC4-218ENST00000486711 UBASH3BQ8TF42 649 aa8.42□□□□□ -1.06
SMC4-218ENST00000486711 DDX3YO15523 660 aaKnown RBP8.41□□□□□ -1.06
SMC4-218ENST00000486711 PHACTR2O75167 634 aa8.41□□□□□ -1.06
SMC4-218ENST00000486711 ARL4DP49703 201 aa8.41□□□□□ -1.06
SMC4-218ENST00000486711 SF3B2Q13435 895 aaKnown RBP8.41□□□□□ -1.06
SMC4-218ENST00000486711 FAM46AQ96IP4 442 aaKnown RBP8.41□□□□□ -1.06
SMC4-218ENST00000486711 SOX13Q9UN79 622 aa8.41□□□□□ -1.06
SMC4-218ENST00000486711 EDN3P14138 238 aa8.4□□□□□ -1.06
SMC4-218ENST00000486711 HHIPQ96QV1 700 aa8.4□□□□□ -1.06
SMC4-218ENST00000486711 OSMRQ99650 979 aa8.4□□□□□ -1.06
SMC4-218ENST00000486711 PCMTD2Q9NV79 361 aa8.4□□□□□ -1.06
SMC4-218ENST00000486711 EREGO14944 169 aa8.39□□□□□ -1.07
SMC4-218ENST00000486711 SART1O43290 800 aaKnown RBP8.39□□□□□ -1.07
SMC4-218ENST00000486711 TNFRSF21O75509 655 aa8.39□□□□□ -1.07
SMC4-218ENST00000486711 TRPA1O75762 1119 aa8.39□□□□□ -1.07
SMC4-218ENST00000486711 ANKRD34AQ69YU3 496 aa8.39□□□□□ -1.07
SMC4-218ENST00000486711 SLC7A3Q8WY07 619 aa8.39□□□□□ -1.07
SMC4-218ENST00000486711 MYRFLQ96LU7 910 aa8.39□□□□□ -1.07
SMC4-218ENST00000486711 RNF208Q9H0X6 261 aa8.39□□□□□ -1.07
SMC4-218ENST00000486711 NLRP12P59046 1061 aa8.38□□□□□ -1.07
SMC4-218ENST00000486711 FKBP4Q02790 459 aaKnown RBP eCLIP8.38□□□□□ -1.07
SMC4-218ENST00000486711 C19orf57Q0VDD7 668 aa8.38□□□□□ -1.07
SMC4-218ENST00000486711 BSNDQ8WZ55 320 aa8.38□□□□□ -1.07
SMC4-218ENST00000486711 NXPE3Q969Y0 559 aa8.38□□□□□ -1.07
SMC4-218ENST00000486711 ZKSCAN3Q9BRR0 538 aa8.38□□□□□ -1.07
SMC4-218ENST00000486711 RUSC1Q9BVN2 902 aa8.38□□□□□ -1.07
SMC4-218ENST00000486711 PDIA4P13667 645 aaKnown RBP8.37□□□□□ -1.07
SMC4-218ENST00000486711 SSTR4P31391 388 aa8.37□□□□□ -1.07
SMC4-218ENST00000486711 CD97P48960 835 aa8.37□□□□□ -1.07
SMC4-218ENST00000486711 NFIAQ12857 509 aa8.37□□□□□ -1.07
SMC4-218ENST00000486711 PHLDB3Q6NSJ2 640 aa8.37□□□□□ -1.07
SMC4-218ENST00000486711 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.37□□□□□ -1.07
SMC4-218ENST00000486711 C7orf69Q9H7B7 122 aa8.37□□□□□ -1.07
SMC4-218ENST00000486711 FOXD3Q9UJU5 478 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms