RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 C15orf52Q6ZUT6 534 aaKnown RBP22.73■■□□□ 1.23
COL1A1-207ENST00000486572 LDHDQ86WU2 507 aa22.73■■□□□ 1.23
COL1A1-207ENST00000486572 IRS2Q9Y4H2 1338 aa22.73■■□□□ 1.23
COL1A1-207ENST00000486572 ADAMTSL1Q8N6G6 1762 aa22.73■■□□□ 1.23
COL1A1-207ENST00000486572 RPS12P25398 132 aaKnown RBP22.72■■□□□ 1.23
COL1A1-207ENST00000486572 METTL24Q5JXM2 366 aa22.72■■□□□ 1.23
COL1A1-207ENST00000486572 ZBTB12Q9Y330 459 aaPredicted RBP22.72■■□□□ 1.23
COL1A1-207ENST00000486572 VIL1P09327 827 aaKnown RBP22.71■■□□□ 1.23
COL1A1-207ENST00000486572 MS4A1P11836 297 aa22.71■■□□□ 1.23
COL1A1-207ENST00000486572 MTX1Q13505 466 aa22.71■■□□□ 1.23
COL1A1-207ENST00000486572 UBE4AQ14139 1066 aa22.71■■□□□ 1.23
COL1A1-207ENST00000486572 CHADLQ6NUI6 762 aa22.71■■□□□ 1.23
COL1A1-207ENST00000486572 DPF2Q92785 391 aa22.71■■□□□ 1.23
COL1A1-207ENST00000486572 ADARB2Q9NS39 739 aaKnown RBP22.71■■□□□ 1.23
COL1A1-207ENST00000486572 ZNF609O15014 1411 aa22.71■■□□□ 1.23
COL1A1-207ENST00000486572 EYA2O00167 538 aa22.7■■□□□ 1.22
COL1A1-207ENST00000486572 HSPA6P17066 643 aa22.7■■□□□ 1.22
COL1A1-207ENST00000486572 USP50Q70EL3 339 aaPredicted RBP22.7■■□□□ 1.22
COL1A1-207ENST00000486572 FBXO3Q9UK99 471 aa22.7■■□□□ 1.22
COL1A1-207ENST00000486572 USP17L3A6NCW0 530 aa22.69■■□□□ 1.22
COL1A1-207ENST00000486572 USP17L4A6NCW7 530 aa22.69■■□□□ 1.22
COL1A1-207ENST00000486572 USP17L1Q7RTZ2 530 aa22.69■■□□□ 1.22
COL1A1-207ENST00000486572 ZNF804AQ7Z570 1209 aa22.69■■□□□ 1.22
COL1A1-207ENST00000486572 MICALL2Q8IY33 904 aa22.69■■□□□ 1.22
COL1A1-207ENST00000486572 VGLL2Q8N8G2 317 aa22.69■■□□□ 1.22
COL1A1-207ENST00000486572 PANK1Q8TE04 598 aa22.69■■□□□ 1.22
COL1A1-207ENST00000486572 CNOT7Q9UIV1 285 aaKnown RBP22.69■■□□□ 1.22
COL1A1-207ENST00000486572 SRGAP3O43295 1099 aa22.68■■□□□ 1.22
COL1A1-207ENST00000486572 CIAO1O76071 339 aa22.68■■□□□ 1.22
COL1A1-207ENST00000486572 PDE8BO95263 885 aa22.68■■□□□ 1.22
COL1A1-207ENST00000486572 RSBN1LQ6PCB5 846 aaPredicted RBP22.68■■□□□ 1.22
COL1A1-207ENST00000486572 SIL1Q9H173 461 aa22.68■■□□□ 1.22
COL1A1-207ENST00000486572 CLEC11AQ9Y240 323 aa22.68■■□□□ 1.22
COL1A1-207ENST00000486572 ZNF646O15015 1829 aaPredicted RBP22.67■■□□□ 1.22
COL1A1-207ENST00000486572 H7C1D1 291 aa22.67■■□□□ 1.22
COL1A1-207ENST00000486572 ATG9AQ7Z3C6 839 aa22.67■■□□□ 1.22
COL1A1-207ENST00000486572 AGBL3Q8NEM8 1001 aa22.67■■□□□ 1.22
COL1A1-207ENST00000486572 CD209Q9NNX6 404 aa22.67■■□□□ 1.22
COL1A1-207ENST00000486572 COPRSQ9NQ92 184 aa22.67■■□□□ 1.22
COL1A1-207ENST00000486572 SHTN1A0MZ66 631 aa22.66■■□□□ 1.22
COL1A1-207ENST00000486572 ZBTB7BO15156 539 aaPredicted RBP22.66■■□□□ 1.22
COL1A1-207ENST00000486572 STRIP1Q5VSL9 837 aa22.66■■□□□ 1.22
COL1A1-207ENST00000486572 FBXW7Q969H0 707 aa22.66■■□□□ 1.22
COL1A1-207ENST00000486572 PA2G4Q9UQ80 394 aaKnown RBP22.66■■□□□ 1.22
COL1A1-207ENST00000486572 PUM3Q15397 648 aaKnown RBP22.65■■□□□ 1.22
COL1A1-207ENST00000486572 DACT2Q5SW24 774 aa22.65■■□□□ 1.22
COL1A1-207ENST00000486572 MYO3BQ8WXR4 1341 aa22.64■■□□□ 1.22
COL1A1-207ENST00000486572 IL1R1P14778 569 aa22.64■■□□□ 1.21
COL1A1-207ENST00000486572 IL15P40933 162 aaPredicted RBP22.64■■□□□ 1.21
COL1A1-207ENST00000486572 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.64■■□□□ 1.21
COL1A1-207ENST00000486572 GMLQ99445 158 aa22.64■■□□□ 1.21
COL1A1-207ENST00000486572 GYG1P46976 350 aa22.63■■□□□ 1.21
COL1A1-207ENST00000486572 GTF2IP78347 998 aa22.63■■□□□ 1.21
COL1A1-207ENST00000486572 MVPQ14764 893 aaKnown RBP22.63■■□□□ 1.21
COL1A1-207ENST00000486572 TTLL5Q6EMB2 1281 aa22.63■■□□□ 1.21
COL1A1-207ENST00000486572 TRPM4Q8TD43 1214 aa22.63■■□□□ 1.21
COL1A1-207ENST00000486572 C1orf115Q9H7X2 142 aa22.63■■□□□ 1.21
COL1A1-207ENST00000486572 PNMA6EA0A0J9YXQ4 647 aa22.62■■□□□ 1.21
COL1A1-207ENST00000486572 FGFR2P21802 821 aa22.62■■□□□ 1.21
COL1A1-207ENST00000486572 HIBADHP31937 336 aaKnown RBP22.62■■□□□ 1.21
COL1A1-207ENST00000486572 APLP1P51693 650 aa22.62■■□□□ 1.21
COL1A1-207ENST00000486572 MAP1SQ66K74 1059 aaPredicted RBP22.62■■□□□ 1.21
COL1A1-207ENST00000486572 FAM84BQ96KN1 310 aaPredicted RBP22.62■■□□□ 1.21
COL1A1-207ENST00000486572 CEP126Q9P2H0 1117 aa22.62■■□□□ 1.21
COL1A1-207ENST00000486572 IFIT1P09914 478 aaKnown RBP22.61■■□□□ 1.21
COL1A1-207ENST00000486572 USP17L8P0C7I0 530 aa22.61■■□□□ 1.21
COL1A1-207ENST00000486572 HIRAP54198 1017 aaPredicted RBP22.61■■□□□ 1.21
COL1A1-207ENST00000486572 ZNF280AP59817 542 aaPredicted RBP22.61■■□□□ 1.21
COL1A1-207ENST00000486572 TBC1D10BQ4KMP7 808 aaPredicted RBP22.61■■□□□ 1.21
COL1A1-207ENST00000486572 CAVIN4Q5BKX8 364 aa22.61■■□□□ 1.21
COL1A1-207ENST00000486572 SAMD7Q7Z3H4 446 aa22.61■■□□□ 1.21
COL1A1-207ENST00000486572 MXD3Q9BW11 206 aa22.61■■□□□ 1.21
COL1A1-207ENST00000486572 DDX19BQ9UMR2 479 aa22.61■■□□□ 1.21
COL1A1-207ENST00000486572 COG6Q9Y2V7 657 aa22.61■■□□□ 1.21
COL1A1-207ENST00000486572 SLC5A1P13866 664 aa22.6■■□□□ 1.21
COL1A1-207ENST00000486572 PDE3AQ14432 1141 aa22.6■■□□□ 1.21
COL1A1-207ENST00000486572 VPS37DQ86XT2 251 aa22.6■■□□□ 1.21
COL1A1-207ENST00000486572 CNTROBQ8N137 903 aa22.6■■□□□ 1.21
COL1A1-207ENST00000486572 ZC3H15Q8WU90 426 aaKnown RBP22.6■■□□□ 1.21
COL1A1-207ENST00000486572 LPIN2Q92539 896 aa22.6■■□□□ 1.21
COL1A1-207ENST00000486572 PASKQ96RG2 1323 aa22.59■■□□□ 1.21
COL1A1-207ENST00000486572 ITGBL1O95965 494 aaPredicted RBP22.59■■□□□ 1.21
COL1A1-207ENST00000486572 EGFRP00533 1210 aa22.59■■□□□ 1.21
COL1A1-207ENST00000486572 ATP8B2P98198 1209 aa22.59■■□□□ 1.21
COL1A1-207ENST00000486572 ATP2B3Q16720 1220 aa22.59■■□□□ 1.21
COL1A1-207ENST00000486572 KIF4BQ2VIQ3 1234 aa22.59■■□□□ 1.21
COL1A1-207ENST00000486572 FBXO33Q7Z6M2 555 aa22.59■■□□□ 1.21
COL1A1-207ENST00000486572 TDRD7Q8NHU6 1098 aaKnown RBP22.59■■□□□ 1.21
COL1A1-207ENST00000486572 SASH1O94885 1247 aa22.58■■□□□ 1.21
COL1A1-207ENST00000486572 POLA2Q14181 598 aa22.58■■□□□ 1.21
COL1A1-207ENST00000486572 RBM26Q5T8P6 1007 aaKnown RBP22.58■■□□□ 1.21
COL1A1-207ENST00000486572 OGFOD1Q8N543 542 aa22.58■■□□□ 1.21
COL1A1-207ENST00000486572 SSH3Q8TE77 659 aa22.58■■□□□ 1.21
COL1A1-207ENST00000486572 PGAP2Q9UHJ9 254 aa22.58■■□□□ 1.21
COL1A1-207ENST00000486572 MYOZ2Q9NPC6 264 aa22.57■■□□□ 1.2
COL1A1-207ENST00000486572 FAM205AQ6ZU69 1335 aa22.57■■□□□ 1.2
COL1A1-207ENST00000486572 MMP14P50281 582 aa22.56■■□□□ 1.2
COL1A1-207ENST00000486572 FKBP1AP62942 108 aaKnown RBP22.56■■□□□ 1.2
COL1A1-207ENST00000486572 C20orf194Q5TEA3 1177 aa22.56■■□□□ 1.2
COL1A1-207ENST00000486572 CEP85Q6P2H3 762 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms