RNA–Protein interactions for RNA: ENST00000486554.1

TSC22D3-208, Transcript of TSC22 domain family member 3, humanhuman

TSL 2

Gene TSC22D3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-208ENST00000486554 RPTORQ8N122 1335 aa18.03■□□□□ 0.48
TSC22D3-208ENST00000486554 FARP2O94887 1054 aaPredicted RBP18.03■□□□□ 0.48
TSC22D3-208ENST00000486554 RTF1Q92541 710 aaKnown RBP18.03■□□□□ 0.48
TSC22D3-208ENST00000486554 PSME4Q14997 1843 aa18.02■□□□□ 0.48
TSC22D3-208ENST00000486554 WNT10BO00744 389 aa18.02■□□□□ 0.48
TSC22D3-208ENST00000486554 GJA8P48165 433 aa18.02■□□□□ 0.48
TSC22D3-208ENST00000486554 ZSWIM8A7E2V4 1837 aa18.02■□□□□ 0.47
TSC22D3-208ENST00000486554 UFL1O94874 794 aa18.01■□□□□ 0.47
TSC22D3-208ENST00000486554 SASH1O94885 1247 aa18.01■□□□□ 0.47
TSC22D3-208ENST00000486554 GJA5P36382 358 aa18.01■□□□□ 0.47
TSC22D3-208ENST00000486554 TAF1CQ15572 869 aaPredicted RBP18.01■□□□□ 0.47
TSC22D3-208ENST00000486554 AMER1Q5JTC6 1135 aaPredicted RBP18.01■□□□□ 0.47
TSC22D3-208ENST00000486554 APOBEC3FQ8IUX4 373 aaKnown RBP18.01■□□□□ 0.47
TSC22D3-208ENST00000486554 FAM122AQ96E09 287 aa18.01■□□□□ 0.47
TSC22D3-208ENST00000486554 ARHGAP39Q9C0H5 1083 aa18.01■□□□□ 0.47
TSC22D3-208ENST00000486554 KNSTRNQ9Y448 316 aa18.01■□□□□ 0.47
TSC22D3-208ENST00000486554 BCAMP50895 628 aa18■□□□□ 0.47
TSC22D3-208ENST00000486554 KIF22Q14807 665 aa18■□□□□ 0.47
TSC22D3-208ENST00000486554 LRIT3Q3SXY7 679 aa18■□□□□ 0.47
TSC22D3-208ENST00000486554 PHACTR3Q96KR7 559 aa18■□□□□ 0.47
TSC22D3-208ENST00000486554 ZFYVE28Q9HCC9 887 aa18■□□□□ 0.47
TSC22D3-208ENST00000486554 TRMT112Q9UI30 125 aaKnown RBP18■□□□□ 0.47
TSC22D3-208ENST00000486554 SH3TC1Q8TE82 1336 aa17.99■□□□□ 0.47
TSC22D3-208ENST00000486554 USP17L3A6NCW0 530 aa17.99■□□□□ 0.47
TSC22D3-208ENST00000486554 USP17L4A6NCW7 530 aa17.99■□□□□ 0.47
TSC22D3-208ENST00000486554 GJB1P08034 283 aa17.99■□□□□ 0.47
TSC22D3-208ENST00000486554 BMP8BP34820 402 aa17.99■□□□□ 0.47
TSC22D3-208ENST00000486554 DDX10Q13206 875 aaKnown RBP17.99■□□□□ 0.47
TSC22D3-208ENST00000486554 MAP3K11Q16584 847 aa17.99■□□□□ 0.47
TSC22D3-208ENST00000486554 USP17L1Q7RTZ2 530 aa17.99■□□□□ 0.47
TSC22D3-208ENST00000486554 OGFOD1Q8N543 542 aa17.99■□□□□ 0.47
TSC22D3-208ENST00000486554 GDF15Q99988 308 aa17.99■□□□□ 0.47
TSC22D3-208ENST00000486554 MIS18AQ9NYP9 233 aa17.99■□□□□ 0.47
TSC22D3-208ENST00000486554 COL4A1P02462 1669 aa17.99■□□□□ 0.47
TSC22D3-208ENST00000486554 TESPA1A2RU30 521 aaPredicted RBP17.98■□□□□ 0.47
TSC22D3-208ENST00000486554 PPP1R12BO60237 982 aaPredicted RBP17.98■□□□□ 0.47
TSC22D3-208ENST00000486554 CCL5P13501 91 aa17.98■□□□□ 0.47
TSC22D3-208ENST00000486554 DCTN1Q14203 1278 aa17.98■□□□□ 0.47
TSC22D3-208ENST00000486554 NLRP10Q86W26 655 aa17.98■□□□□ 0.47
TSC22D3-208ENST00000486554 RNF208Q9H0X6 261 aa17.98■□□□□ 0.47
TSC22D3-208ENST00000486554 ECM2O94769 699 aaPredicted RBP17.97■□□□□ 0.47
TSC22D3-208ENST00000486554 ANKIB1Q9P2G1 1089 aa17.97■□□□□ 0.47
TSC22D3-208ENST00000486554 PRKAR2BP31323 418 aa17.96■□□□□ 0.47
TSC22D3-208ENST00000486554 ZNF428Q96B54 188 aa17.96■□□□□ 0.47
TSC22D3-208ENST00000486554 GGA1Q9UJY5 639 aa17.96■□□□□ 0.47
TSC22D3-208ENST00000486554 SSC5DA1L4H1 1573 aa17.96■□□□□ 0.46
TSC22D3-208ENST00000486554 PRMT2P55345 433 aa17.95■□□□□ 0.46
TSC22D3-208ENST00000486554 LACTBP83111 547 aaPredicted RBP17.95■□□□□ 0.46
TSC22D3-208ENST00000486554 TAF7Q15545 349 aaPredicted RBP17.95■□□□□ 0.46
TSC22D3-208ENST00000486554 U2AF1L4Q8WU68 220 aaKnown RBP17.95■□□□□ 0.46
TSC22D3-208ENST00000486554 GUCD1Q96NT3 240 aa17.95■□□□□ 0.46
TSC22D3-208ENST00000486554 THUMPD2Q9BTF0 503 aaKnown RBP17.95■□□□□ 0.46
TSC22D3-208ENST00000486554 MXD3Q9BW11 206 aa17.95■□□□□ 0.46
TSC22D3-208ENST00000486554 IRS2Q9Y4H2 1338 aa17.95■□□□□ 0.46
TSC22D3-208ENST00000486554 COL1A1P02452 1464 aaPredicted RBP17.95■□□□□ 0.46
TSC22D3-208ENST00000486554 GNRH1P01148 92 aa17.94■□□□□ 0.46
TSC22D3-208ENST00000486554 GRK4P32298 578 aa17.94■□□□□ 0.46
TSC22D3-208ENST00000486554 TDHQ8IZJ6 230 aa17.94■□□□□ 0.46
TSC22D3-208ENST00000486554 FBXW7Q969H0 707 aa17.94■□□□□ 0.46
TSC22D3-208ENST00000486554 PODXL2Q9NZ53 605 aa17.94■□□□□ 0.46
TSC22D3-208ENST00000486554 BIN2Q9UBW5 565 aaPredicted RBP17.94■□□□□ 0.46
TSC22D3-208ENST00000486554 UNCXA6NJT0 531 aa17.93■□□□□ 0.46
TSC22D3-208ENST00000486554 DEFB129Q9H1M3 183 aa17.93■□□□□ 0.46
TSC22D3-208ENST00000486554 ZMYND8Q9ULU4 1186 aaPredicted RBP17.93■□□□□ 0.46
TSC22D3-208ENST00000486554 COL3A1P02461 1466 aaPredicted RBP17.93■□□□□ 0.46
TSC22D3-208ENST00000486554 HOXD11P31277 338 aaPredicted RBP17.92■□□□□ 0.46
TSC22D3-208ENST00000486554 IREB2P48200 963 aaKnown RBP17.92■□□□□ 0.46
TSC22D3-208ENST00000486554 HSP90AB3PQ58FF7 597 aa17.92■□□□□ 0.46
TSC22D3-208ENST00000486554 RAET1EQ8TD07 263 aa17.92■□□□□ 0.46
TSC22D3-208ENST00000486554 BRI3BPQ8WY22 251 aa17.92■□□□□ 0.46
TSC22D3-208ENST00000486554 SYMPKQ92797 1274 aaKnown RBP17.92■□□□□ 0.46
TSC22D3-208ENST00000486554 OPTNQ96CV9 577 aa17.92■□□□□ 0.46
TSC22D3-208ENST00000486554 FAM161BQ96MY7 647 aa17.92■□□□□ 0.46
TSC22D3-208ENST00000486554 RIPOR2Q9Y4F9 1068 aa17.92■□□□□ 0.46
TSC22D3-208ENST00000486554 CCL15-CCL14A0A0B4J2E2 113 aa17.91■□□□□ 0.46
TSC22D3-208ENST00000486554 RPS8P62241 208 aaKnown RBP17.91■□□□□ 0.46
TSC22D3-208ENST00000486554 UBXN2AP68543 259 aa17.91■□□□□ 0.46
TSC22D3-208ENST00000486554 SF3B3Q15393 1217 aaKnown RBP17.91■□□□□ 0.46
TSC22D3-208ENST00000486554 CCL15Q16663 113 aa17.91■□□□□ 0.46
TSC22D3-208ENST00000486554 PODNQ7Z5L7 613 aa17.91■□□□□ 0.46
TSC22D3-208ENST00000486554 C7orf61Q8IZ16 206 aa17.91■□□□□ 0.46
TSC22D3-208ENST00000486554 FAM43AQ8N2R8 423 aa17.91■□□□□ 0.46
TSC22D3-208ENST00000486554 MS4A4AQ96JQ5 239 aa17.91■□□□□ 0.46
TSC22D3-208ENST00000486554 ELP3Q9H9T3 547 aa17.91■□□□□ 0.46
TSC22D3-208ENST00000486554 ALPK3Q96L96 1907 aa17.9■□□□□ 0.46
TSC22D3-208ENST00000486554 WDHD1O75717 1129 aaPredicted RBP17.9■□□□□ 0.46
TSC22D3-208ENST00000486554 ANKRD13AQ8IZ07 590 aa17.9■□□□□ 0.46
TSC22D3-208ENST00000486554 SRRDQ9UH36 339 aa17.9■□□□□ 0.46
TSC22D3-208ENST00000486554 TMEM265A0A087WTH1 108 aa17.89■□□□□ 0.45
TSC22D3-208ENST00000486554 EIF4A1P60842 406 aaKnown RBP17.89■□□□□ 0.45
TSC22D3-208ENST00000486554 DACT2Q5SW24 774 aa17.89■□□□□ 0.45
TSC22D3-208ENST00000486554 TRIM47Q96LD4 638 aa17.89■□□□□ 0.45
TSC22D3-208ENST00000486554 RSPH6AQ9H0K4 717 aa17.89■□□□□ 0.45
TSC22D3-208ENST00000486554 MYO3BQ8WXR4 1341 aa17.89■□□□□ 0.45
TSC22D3-208ENST00000486554 TLR2O60603 784 aa17.88■□□□□ 0.45
TSC22D3-208ENST00000486554 SGPL1O95470 568 aa17.88■□□□□ 0.45
TSC22D3-208ENST00000486554 MAGEA10P43363 369 aaPredicted RBP17.88■□□□□ 0.45
TSC22D3-208ENST00000486554 UNC93B1Q9H1C4 597 aa17.88■□□□□ 0.45
TSC22D3-208ENST00000486554 TTC28Q96AY4 2481 aa17.88■□□□□ 0.45
TSC22D3-208ENST00000486554 EYSQ5T1H1 3165 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms