RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 FRAT1Q92837 279 aaPredicted RBP13.86□□□□□ -0.19
SNX21-211ENST00000486336 PUS3Q9BZE2 481 aaKnown RBP13.86□□□□□ -0.19
SNX21-211ENST00000486336 BCAR3O75815 825 aa13.85□□□□□ -0.19
SNX21-211ENST00000486336 BRPF1P55201 1214 aaPredicted RBP13.85□□□□□ -0.19
SNX21-211ENST00000486336 ANKRD44Q8N8A2 993 aa13.85□□□□□ -0.19
SNX21-211ENST00000486336 AGBL3Q8NEM8 1001 aa13.85□□□□□ -0.19
SNX21-211ENST00000486336 MXD3Q9BW11 206 aa13.85□□□□□ -0.19
SNX21-211ENST00000486336 GLIS2Q9BZE0 524 aaPredicted RBP13.85□□□□□ -0.19
SNX21-211ENST00000486336 ABT1Q9ULW3 272 aaKnown RBP13.85□□□□□ -0.19
SNX21-211ENST00000486336 ADAMTSL1Q8N6G6 1762 aa13.85□□□□□ -0.19
SNX21-211ENST00000486336 SCN9AQ15858 1988 aa13.84□□□□□ -0.19
SNX21-211ENST00000486336 IPO8O15397 1037 aaKnown RBP13.84□□□□□ -0.19
SNX21-211ENST00000486336 EGFRP00533 1210 aa13.84□□□□□ -0.19
SNX21-211ENST00000486336 UBTFL1P0CB47 393 aaPredicted RBP13.84□□□□□ -0.19
SNX21-211ENST00000486336 KIF4BQ2VIQ3 1234 aa13.84□□□□□ -0.19
SNX21-211ENST00000486336 TTLL5Q6EMB2 1281 aa13.84□□□□□ -0.19
SNX21-211ENST00000486336 USP48Q86UV5 1035 aa13.84□□□□□ -0.19
SNX21-211ENST00000486336 ZC3H15Q8WU90 426 aaKnown RBP13.84□□□□□ -0.19
SNX21-211ENST00000486336 ZNF408Q9H9D4 720 aa13.84□□□□□ -0.19
SNX21-211ENST00000486336 KIF16BQ96L93 1317 aa13.84□□□□□ -0.19
SNX21-211ENST00000486336 USP17L8P0C7I0 530 aa13.83□□□□□ -0.2
SNX21-211ENST00000486336 GTF2IP78347 998 aa13.83□□□□□ -0.2
SNX21-211ENST00000486336 RABL6Q3YEC7 729 aaPredicted RBP13.83□□□□□ -0.2
SNX21-211ENST00000486336 CDC37L1Q7L3B6 337 aa13.83□□□□□ -0.2
SNX21-211ENST00000486336 ZNF804AQ7Z570 1209 aa13.83□□□□□ -0.2
SNX21-211ENST00000486336 KLHDC4Q8TBB5 520 aa13.83□□□□□ -0.2
SNX21-211ENST00000486336 DCPSQ96C86 337 aaKnown RBP13.83□□□□□ -0.2
SNX21-211ENST00000486336 CD209Q9NNX6 404 aa13.83□□□□□ -0.2
SNX21-211ENST00000486336 CELF2O95319 508 aaKnown RBP13.82□□□□□ -0.2
SNX21-211ENST00000486336 LRRC24Q50LG9 513 aa13.82□□□□□ -0.2
SNX21-211ENST00000486336 METTL24Q5JXM2 366 aa13.82□□□□□ -0.2
SNX21-211ENST00000486336 DACT2Q5SW24 774 aa13.82□□□□□ -0.2
SNX21-211ENST00000486336 STRIP1Q5VSL9 837 aa13.82□□□□□ -0.2
SNX21-211ENST00000486336 PAXIP1Q6ZW49 1069 aaPredicted RBP13.82□□□□□ -0.2
SNX21-211ENST00000486336 ARHGAP45Q92619 1136 aa13.82□□□□□ -0.2
SNX21-211ENST00000486336 CLUAP1Q96AJ1 413 aa13.82□□□□□ -0.2
SNX21-211ENST00000486336 PGAP2Q9UHJ9 254 aa13.82□□□□□ -0.2
SNX21-211ENST00000486336 RIPOR2Q9Y4F9 1068 aa13.82□□□□□ -0.2
SNX21-211ENST00000486336 MROH5Q6ZUA9 1318 aa13.82□□□□□ -0.2
SNX21-211ENST00000486336 UBE4AQ14139 1066 aa13.81□□□□□ -0.2
SNX21-211ENST00000486336 SCARF1Q14162 830 aa13.81□□□□□ -0.2
SNX21-211ENST00000486336 DEFB115Q30KQ5 88 aa13.81□□□□□ -0.2
SNX21-211ENST00000486336 DLK2Q6UY11 383 aa13.81□□□□□ -0.2
SNX21-211ENST00000486336 KRT26Q7Z3Y9 468 aa13.81□□□□□ -0.2
SNX21-211ENST00000486336 OGFOD1Q8N543 542 aa13.81□□□□□ -0.2
SNX21-211ENST00000486336 GMLQ99445 158 aa13.81□□□□□ -0.2
SNX21-211ENST00000486336 MYOZ2Q9NPC6 264 aa13.81□□□□□ -0.2
SNX21-211ENST00000486336 HDAC5Q9UQL6 1122 aa13.81□□□□□ -0.2
SNX21-211ENST00000486336 TNNQ9UQP3 1299 aa13.81□□□□□ -0.2
SNX21-211ENST00000486336 JAG2Q9Y219 1238 aa13.81□□□□□ -0.2
SNX21-211ENST00000486336 LRRFIP2Q9Y608 721 aaKnown RBP13.81□□□□□ -0.2
SNX21-211ENST00000486336 ZNF280AP59817 542 aaPredicted RBP13.8□□□□□ -0.2
SNX21-211ENST00000486336 GRM1Q13255 1194 aa13.8□□□□□ -0.2
SNX21-211ENST00000486336 CST9Q5W186 159 aa13.8□□□□□ -0.2
SNX21-211ENST00000486336 ATF7IPQ6VMQ6 1270 aa13.8□□□□□ -0.2
SNX21-211ENST00000486336 C15orf52Q6ZUT6 534 aaKnown RBP13.8□□□□□ -0.2
SNX21-211ENST00000486336 KIAA0825Q8IV33 1275 aa13.8□□□□□ -0.2
SNX21-211ENST00000486336 JMYQ8N9B5 988 aa13.8□□□□□ -0.2
SNX21-211ENST00000486336 MEIS3Q99687 375 aa13.8□□□□□ -0.2
SNX21-211ENST00000486336 ASTN2O75129 1339 aaPredicted RBP13.8□□□□□ -0.2
SNX21-211ENST00000486336 ZBED9Q6R2W3 1325 aa13.8□□□□□ -0.2
SNX21-211ENST00000486336 ADM5C9JUS6 153 aa13.79□□□□□ -0.2
SNX21-211ENST00000486336 TRIM27P14373 513 aa13.79□□□□□ -0.2
SNX21-211ENST00000486336 HIBADHP31937 336 aaKnown RBP13.79□□□□□ -0.2
SNX21-211ENST00000486336 GYG1P46976 350 aa13.79□□□□□ -0.2
SNX21-211ENST00000486336 VEGFBP49765 207 aa13.79□□□□□ -0.2
SNX21-211ENST00000486336 ZKSCAN2Q63HK3 967 aa13.79□□□□□ -0.2
SNX21-211ENST00000486336 INTS3Q68E01 1043 aaKnown RBP13.79□□□□□ -0.2
SNX21-211ENST00000486336 VPS37DQ86XT2 251 aa13.79□□□□□ -0.2
SNX21-211ENST00000486336 SULF1Q8IWU6 871 aa13.79□□□□□ -0.2
SNX21-211ENST00000486336 SIL1Q9H173 461 aa13.79□□□□□ -0.2
SNX21-211ENST00000486336 GGA3Q9NZ52 723 aa13.79□□□□□ -0.2
SNX21-211ENST00000486336 HDAC9Q9UKV0 1011 aa13.79□□□□□ -0.2
SNX21-211ENST00000486336 MYO3BQ8WXR4 1341 aa13.79□□□□□ -0.2
SNX21-211ENST00000486336 CNTNAP1P78357 1384 aa13.79□□□□□ -0.2
SNX21-211ENST00000486336 F8W031 263 aaPredicted RBP13.78□□□□□ -0.2
SNX21-211ENST00000486336 GNAI3P08754 354 aa13.78□□□□□ -0.2
SNX21-211ENST00000486336 IL1R1P14778 569 aa13.78□□□□□ -0.2
SNX21-211ENST00000486336 ANGEL2Q5VTE6 544 aaKnown RBP13.78□□□□□ -0.2
SNX21-211ENST00000486336 IRS2Q9Y4H2 1338 aa13.78□□□□□ -0.2
SNX21-211ENST00000486336 RASSF10A6NK89 507 aa13.77□□□□□ -0.21
SNX21-211ENST00000486336 EYA2O00167 538 aa13.77□□□□□ -0.21
SNX21-211ENST00000486336 FRAT2O75474 233 aaPredicted RBP13.77□□□□□ -0.21
SNX21-211ENST00000486336 PDE8BO95263 885 aa13.77□□□□□ -0.21
SNX21-211ENST00000486336 POLR2AP24928 1970 aaKnown RBP13.77□□□□□ -0.21
SNX21-211ENST00000486336 RFX5P48382 616 aaPredicted RBP13.77□□□□□ -0.21
SNX21-211ENST00000486336 PTPN12Q05209 780 aaKnown RBP13.77□□□□□ -0.21
SNX21-211ENST00000486336 NBPF9Q3BBW0 867 aa13.77□□□□□ -0.21
SNX21-211ENST00000486336 FAM84BQ96KN1 310 aaPredicted RBP13.77□□□□□ -0.21
SNX21-211ENST00000486336 SCAF8Q9UPN6 1271 aaKnown RBP13.77□□□□□ -0.21
SNX21-211ENST00000486336 PSME4Q14997 1843 aa13.76□□□□□ -0.21
SNX21-211ENST00000486336 HSPA1AP0DMV8 641 aaKnown RBP13.76□□□□□ -0.21
SNX21-211ENST00000486336 HSPA1BP0DMV9 641 aaKnown RBP13.76□□□□□ -0.21
SNX21-211ENST00000486336 CAVIN4Q5BKX8 364 aa13.76□□□□□ -0.21
SNX21-211ENST00000486336 IQSEC3Q9UPP2 1182 aaPredicted RBP13.76□□□□□ -0.21
SNX21-211ENST00000486336 PA2G4Q9UQ80 394 aaKnown RBP13.76□□□□□ -0.21
SNX21-211ENST00000486336 TLL2Q9Y6L7 1015 aa13.76□□□□□ -0.21
SNX21-211ENST00000486336 TRPM7Q96QT4 1865 aa13.76□□□□□ -0.21
SNX21-211ENST00000486336 ZNF609O15014 1411 aa13.75□□□□□ -0.21
SNX21-211ENST00000486336 WDR33Q9C0J8 1336 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms