RNA–Protein interactions for RNA: ENST00000486325.1

VTI1BP1-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 1, humanhuman

BASIC

Gene VTI1BP1, Length 700 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP1-201ENST00000486325 C15orf52Q6ZUT6 534 aaKnown RBP16.11■□□□□ 0.17
VTI1BP1-201ENST00000486325 VPS37DQ86XT2 251 aa16.11■□□□□ 0.17
VTI1BP1-201ENST00000486325 TTLL6Q8N841 843 aa16.11■□□□□ 0.17
VTI1BP1-201ENST00000486325 SGIP1Q9BQI5 828 aa16.11■□□□□ 0.17
VTI1BP1-201ENST00000486325 SPON1Q9HCB6 807 aa16.11■□□□□ 0.17
VTI1BP1-201ENST00000486325 ARID4AP29374 1257 aaPredicted RBP16.1■□□□□ 0.17
VTI1BP1-201ENST00000486325 GPSM2P81274 684 aa16.1■□□□□ 0.17
VTI1BP1-201ENST00000486325 FBXO33Q7Z6M2 555 aa16.1■□□□□ 0.17
VTI1BP1-201ENST00000486325 MPNDQ8N594 471 aa16.1■□□□□ 0.17
VTI1BP1-201ENST00000486325 SEMA3EO15041 775 aa16.09■□□□□ 0.17
VTI1BP1-201ENST00000486325 MAP4K4O95819 1239 aaPredicted RBP16.09■□□□□ 0.17
VTI1BP1-201ENST00000486325 HIBADHP31937 336 aaKnown RBP16.09■□□□□ 0.17
VTI1BP1-201ENST00000486325 PHKA1P46020 1223 aa16.09■□□□□ 0.17
VTI1BP1-201ENST00000486325 BCAMP50895 628 aa16.09■□□□□ 0.17
VTI1BP1-201ENST00000486325 TTF1Q15361 905 aaPredicted RBP16.09■□□□□ 0.17
VTI1BP1-201ENST00000486325 PRPF40BQ6NWY9 871 aaKnown RBP16.09■□□□□ 0.17
VTI1BP1-201ENST00000486325 FAM84BQ96KN1 310 aaPredicted RBP16.09■□□□□ 0.17
VTI1BP1-201ENST00000486325 DNAJC2Q99543 621 aaKnown RBP16.09■□□□□ 0.17
VTI1BP1-201ENST00000486325 PAG1Q9NWQ8 432 aa16.09■□□□□ 0.17
VTI1BP1-201ENST00000486325 SPEF2Q9C093 1822 aa16.09■□□□□ 0.17
VTI1BP1-201ENST00000486325 SNAP23O00161 211 aa16.08■□□□□ 0.16
VTI1BP1-201ENST00000486325 DPEP1P16444 411 aa16.08■□□□□ 0.16
VTI1BP1-201ENST00000486325 FKBP4Q02790 459 aaKnown RBP eCLIP16.08■□□□□ 0.16
VTI1BP1-201ENST00000486325 TBC1D9Q6ZT07 1266 aa16.08■□□□□ 0.16
VTI1BP1-201ENST00000486325 RUFY2Q8WXA3 655 aa16.08■□□□□ 0.16
VTI1BP1-201ENST00000486325 UPF2Q9HAU5 1272 aaKnown RBP16.08■□□□□ 0.16
VTI1BP1-201ENST00000486325 PIM2Q9P1W9 311 aa16.08■□□□□ 0.16
VTI1BP1-201ENST00000486325 COL4A1P02462 1669 aa16.08■□□□□ 0.16
VTI1BP1-201ENST00000486325 A0A0G2JLW4 131 aa16.07■□□□□ 0.16
VTI1BP1-201ENST00000486325 C6orf229H3BNL8 230 aa16.07■□□□□ 0.16
VTI1BP1-201ENST00000486325 UFL1O94874 794 aa16.07■□□□□ 0.16
VTI1BP1-201ENST00000486325 CHMLP26374 656 aa16.07■□□□□ 0.16
VTI1BP1-201ENST00000486325 PTGER2P43116 358 aa16.07■□□□□ 0.16
VTI1BP1-201ENST00000486325 SOGA3Q5TF21 947 aa16.07■□□□□ 0.16
VTI1BP1-201ENST00000486325 DPP8Q6V1X1 898 aaPredicted RBP16.07■□□□□ 0.16
VTI1BP1-201ENST00000486325 ZNF804AQ7Z570 1209 aa16.07■□□□□ 0.16
VTI1BP1-201ENST00000486325 KBTBD3Q8NAB2 608 aa16.07■□□□□ 0.16
VTI1BP1-201ENST00000486325 TBC1D16Q8TBP0 767 aa16.07■□□□□ 0.16
VTI1BP1-201ENST00000486325 EYA3Q99504 573 aa16.07■□□□□ 0.16
VTI1BP1-201ENST00000486325 FSD1Q9BTV5 496 aa16.07■□□□□ 0.16
VTI1BP1-201ENST00000486325 DENND2AQ9ULE3 1009 aa16.07■□□□□ 0.16
VTI1BP1-201ENST00000486325 GOLIM4O00461 696 aa16.06■□□□□ 0.16
VTI1BP1-201ENST00000486325 GYG1P46976 350 aa16.06■□□□□ 0.16
VTI1BP1-201ENST00000486325 ZSCAN25Q6NSZ9 544 aa16.06■□□□□ 0.16
VTI1BP1-201ENST00000486325 SPATA5Q8NB90 893 aa16.06■□□□□ 0.16
VTI1BP1-201ENST00000486325 SUPT20HQ8NEM7 779 aa16.06■□□□□ 0.16
VTI1BP1-201ENST00000486325 C7orf43Q8WVR3 580 aa16.06■□□□□ 0.16
VTI1BP1-201ENST00000486325 DIAPH3Q9NSV4 1193 aa16.06■□□□□ 0.16
VTI1BP1-201ENST00000486325 RFX7Q2KHR2 1363 aa16.05■□□□□ 0.16
VTI1BP1-201ENST00000486325 IGSF3O75054 1194 aa16.05■□□□□ 0.16
VTI1BP1-201ENST00000486325 FRAT2O75474 233 aaPredicted RBP16.05■□□□□ 0.16
VTI1BP1-201ENST00000486325 KCNA3P22001 575 aa16.05■□□□□ 0.16
VTI1BP1-201ENST00000486325 MCAMP43121 646 aa16.05■□□□□ 0.16
VTI1BP1-201ENST00000486325 ZAP70P43403 619 aa16.05■□□□□ 0.16
VTI1BP1-201ENST00000486325 RTKN2Q8IZC4 609 aa16.05■□□□□ 0.16
VTI1BP1-201ENST00000486325 ZC3H12CQ9C0D7 883 aaKnown RBP16.05■□□□□ 0.16
VTI1BP1-201ENST00000486325 SNRKQ9NRH2 765 aa16.05■□□□□ 0.16
VTI1BP1-201ENST00000486325 HMG20BQ9P0W2 317 aa16.05■□□□□ 0.16
VTI1BP1-201ENST00000486325 PPP1R1BQ9UD71 204 aaPredicted RBP16.05■□□□□ 0.16
VTI1BP1-201ENST00000486325 POLLQ9UGP5 575 aa16.05■□□□□ 0.16
VTI1BP1-201ENST00000486325 PDS5AQ29RF7 1337 aaKnown RBP16.04■□□□□ 0.16
VTI1BP1-201ENST00000486325 KIF13BQ9NQT8 1826 aa16.04■□□□□ 0.16
VTI1BP1-201ENST00000486325 WTIPA6NIX2 430 aaPredicted RBP16.04■□□□□ 0.16
VTI1BP1-201ENST00000486325 ZFYP08048 801 aaPredicted RBP16.04■□□□□ 0.16
VTI1BP1-201ENST00000486325 DALRD3Q5D0E6 543 aaKnown RBP16.04■□□□□ 0.16
VTI1BP1-201ENST00000486325 RTFDC1Q9BY42 306 aaPredicted RBP16.04■□□□□ 0.16
VTI1BP1-201ENST00000486325 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.04■□□□□ 0.16
VTI1BP1-201ENST00000486325 MED23Q9ULK4 1368 aa16.03■□□□□ 0.16
VTI1BP1-201ENST00000486325 ARAP2Q8WZ64 1704 aa16.03■□□□□ 0.16
VTI1BP1-201ENST00000486325 IRS2Q9Y4H2 1338 aa16.03■□□□□ 0.16
VTI1BP1-201ENST00000486325 REC8O95072 547 aa16.03■□□□□ 0.16
VTI1BP1-201ENST00000486325 RASGRF1Q13972 1273 aa16.03■□□□□ 0.16
VTI1BP1-201ENST00000486325 SCARF1Q14162 830 aa16.03■□□□□ 0.16
VTI1BP1-201ENST00000486325 WASHC4Q2M389 1173 aa16.03■□□□□ 0.16
VTI1BP1-201ENST00000486325 CCDC93Q567U6 631 aa16.03■□□□□ 0.16
VTI1BP1-201ENST00000486325 VPS33BQ9H267 617 aa16.03■□□□□ 0.16
VTI1BP1-201ENST00000486325 COL11A2P13942 1736 aaPredicted RBP16.02■□□□□ 0.16
VTI1BP1-201ENST00000486325 EPB41L2O43491 1005 aaKnown RBP16.02■□□□□ 0.16
VTI1BP1-201ENST00000486325 CYP2E1P05181 493 aaPredicted RBP16.02■□□□□ 0.16
VTI1BP1-201ENST00000486325 TMED8Q6PL24 325 aaPredicted RBP16.02■□□□□ 0.16
VTI1BP1-201ENST00000486325 TXNRD3Q86VQ6 643 aa16.02■□□□□ 0.16
VTI1BP1-201ENST00000486325 TDRD7Q8NHU6 1098 aaKnown RBP16.02■□□□□ 0.16
VTI1BP1-201ENST00000486325 EDC3Q96F86 508 aaKnown RBP16.02■□□□□ 0.16
VTI1BP1-201ENST00000486325 ESYT1Q9BSJ8 1104 aa16.02■□□□□ 0.16
VTI1BP1-201ENST00000486325 COA1Q9GZY4 146 aa16.02■□□□□ 0.16
VTI1BP1-201ENST00000486325 A0A1B0GUL6 1792 aa16.01■□□□□ 0.15
VTI1BP1-201ENST00000486325 G3V3G9 751 aa16.01■□□□□ 0.15
VTI1BP1-201ENST00000486325 RNF113AO15541 343 aaKnown RBP16.01■□□□□ 0.15
VTI1BP1-201ENST00000486325 C21orf2O43822 256 aa16.01■□□□□ 0.15
VTI1BP1-201ENST00000486325 IL1R1P14778 569 aa16.01■□□□□ 0.15
VTI1BP1-201ENST00000486325 MAP3K12Q12852 859 aa16.01■□□□□ 0.15
VTI1BP1-201ENST00000486325 DCAF8Q5TAQ9 597 aa16.01■□□□□ 0.15
VTI1BP1-201ENST00000486325 KLHL34Q8N239 644 aa16.01■□□□□ 0.15
VTI1BP1-201ENST00000486325 ZGPATQ8N5A5 531 aaKnown RBP16.01■□□□□ 0.15
VTI1BP1-201ENST00000486325 WDR66Q8TBY9 1149 aa16.01■□□□□ 0.15
VTI1BP1-201ENST00000486325 CD209Q9NNX6 404 aa16.01■□□□□ 0.15
VTI1BP1-201ENST00000486325 TSHZ2Q9NRE2 1034 aa16.01■□□□□ 0.15
VTI1BP1-201ENST00000486325 NDUFB9Q9Y6M9 179 aa16.01■□□□□ 0.15
VTI1BP1-201ENST00000486325 LRRC37AA6NMS7 1700 aa16.01■□□□□ 0.15
VTI1BP1-201ENST00000486325 RAD50Q92878 1312 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms