RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 ANKRD2Q9GZV1 360 aa28.55■■■□□ 2.16
SREBF1-214ENST00000486311 ASTN2O75129 1339 aaPredicted RBP28.54■■■□□ 2.16
SREBF1-214ENST00000486311 F6X3S4 739 aa28.54■■■□□ 2.16
SREBF1-214ENST00000486311 HUNKP57058 714 aa28.54■■■□□ 2.16
SREBF1-214ENST00000486311 SULF1Q8IWU6 871 aa28.54■■■□□ 2.16
SREBF1-214ENST00000486311 MPHOSPH8Q99549 860 aa28.54■■■□□ 2.16
SREBF1-214ENST00000486311 COA1Q9GZY4 146 aa28.53■■■□□ 2.16
SREBF1-214ENST00000486311 GBA2Q9HCG7 927 aaPredicted RBP28.53■■■□□ 2.16
SREBF1-214ENST00000486311 SCARF1Q14162 830 aa28.52■■■□□ 2.16
SREBF1-214ENST00000486311 MYOZ2Q9NPC6 264 aa28.52■■■□□ 2.16
SREBF1-214ENST00000486311 MYH3P11055 1940 aa28.51■■■□□ 2.16
SREBF1-214ENST00000486311 ZNF804BA4D1E1 1349 aa28.51■■■□□ 2.15
SREBF1-214ENST00000486311 DACT2Q5SW24 774 aa28.51■■■□□ 2.15
SREBF1-214ENST00000486311 TXNRD3Q86VQ6 643 aa28.51■■■□□ 2.15
SREBF1-214ENST00000486311 C2orf69Q8N8R5 385 aa28.51■■■□□ 2.15
SREBF1-214ENST00000486311 ANKRD18BA2A2Z9 1011 aa28.5■■■□□ 2.15
SREBF1-214ENST00000486311 BRPF1P55201 1214 aaPredicted RBP28.5■■■□□ 2.15
SREBF1-214ENST00000486311 FOXO4P98177 505 aa28.5■■■□□ 2.15
SREBF1-214ENST00000486311 STRIP1Q5VSL9 837 aa28.5■■■□□ 2.15
SREBF1-214ENST00000486311 ANGEL2Q5VTE6 544 aaKnown RBP28.5■■■□□ 2.15
SREBF1-214ENST00000486311 ZNF521Q96K83 1311 aa28.49■■■□□ 2.15
SREBF1-214ENST00000486311 NOGQ13253 232 aa28.49■■■□□ 2.15
SREBF1-214ENST00000486311 KLRK1P26718 216 aa28.48■■■□□ 2.15
SREBF1-214ENST00000486311 CHRNDQ07001 517 aa28.48■■■□□ 2.15
SREBF1-214ENST00000486311 CACNA1FO60840 1977 aa28.48■■■□□ 2.15
SREBF1-214ENST00000486311 MYO3BQ8WXR4 1341 aa28.47■■■□□ 2.15
SREBF1-214ENST00000486311 CA12O43570 354 aa28.47■■■□□ 2.15
SREBF1-214ENST00000486311 IFIT5Q13325 482 aaKnown RBP28.47■■■□□ 2.15
SREBF1-214ENST00000486311 RGMBQ6NW40 437 aa28.47■■■□□ 2.15
SREBF1-214ENST00000486311 CDCA5Q96FF9 252 aa28.47■■■□□ 2.15
SREBF1-214ENST00000486311 MXD3Q9BW11 206 aa28.47■■■□□ 2.15
SREBF1-214ENST00000486311 PITPNM2Q9BZ72 1349 aa28.46■■■□□ 2.15
SREBF1-214ENST00000486311 PSME4Q14997 1843 aa28.46■■■□□ 2.15
SREBF1-214ENST00000486311 GRM8O00222 908 aa28.45■■■□□ 2.14
SREBF1-214ENST00000486311 KCNJ4P48050 445 aa28.45■■■□□ 2.14
SREBF1-214ENST00000486311 FBXW7Q969H0 707 aa28.45■■■□□ 2.14
SREBF1-214ENST00000486311 FAM155AB1AL88 458 aaPredicted RBP28.44■■■□□ 2.14
SREBF1-214ENST00000486311 ALDH1L1O75891 902 aa28.44■■■□□ 2.14
SREBF1-214ENST00000486311 MMP14P50281 582 aa28.44■■■□□ 2.14
SREBF1-214ENST00000486311 EPHA10Q5JZY3 1008 aa28.44■■■□□ 2.14
SREBF1-214ENST00000486311 LMBR1LQ6UX01 489 aa28.44■■■□□ 2.14
SREBF1-214ENST00000486311 OGFOD1Q8N543 542 aa28.44■■■□□ 2.14
SREBF1-214ENST00000486311 CCDC102AQ96A19 550 aa28.44■■■□□ 2.14
SREBF1-214ENST00000486311 ZIC5Q96T25 663 aa28.44■■■□□ 2.14
SREBF1-214ENST00000486311 CHMP3Q9Y3E7 222 aa28.44■■■□□ 2.14
SREBF1-214ENST00000486311 SPEF2Q9C093 1822 aa28.43■■■□□ 2.14
SREBF1-214ENST00000486311 POLR2AP24928 1970 aaKnown RBP28.43■■■□□ 2.14
SREBF1-214ENST00000486311 TTLL5Q6EMB2 1281 aa28.43■■■□□ 2.14
SREBF1-214ENST00000486311 TSKSQ9UJT2 592 aa28.43■■■□□ 2.14
SREBF1-214ENST00000486311 NBPF9Q3BBW0 867 aa28.42■■■□□ 2.14
SREBF1-214ENST00000486311 C15orf52Q6ZUT6 534 aaKnown RBP28.42■■■□□ 2.14
SREBF1-214ENST00000486311 C9orf78Q9NZ63 289 aaPredicted RBP28.42■■■□□ 2.14
SREBF1-214ENST00000486311 IRS2Q9Y4H2 1338 aa28.42■■■□□ 2.14
SREBF1-214ENST00000486311 TAF5LO75529 589 aa28.41■■■□□ 2.14
SREBF1-214ENST00000486311 ZNF157P51786 506 aaPredicted RBP28.41■■■□□ 2.14
SREBF1-214ENST00000486311 SRCIN1Q9C0H9 1055 aa28.41■■■□□ 2.14
SREBF1-214ENST00000486311 CD209Q9NNX6 404 aa28.41■■■□□ 2.14
SREBF1-214ENST00000486311 SNAP23O00161 211 aa28.4■■■□□ 2.14
SREBF1-214ENST00000486311 SLC4A10Q6U841 1118 aa28.4■■■□□ 2.14
SREBF1-214ENST00000486311 HELBQ8NG08 1087 aaPredicted RBP28.4■■■□□ 2.14
SREBF1-214ENST00000486311 WNT10BO00744 389 aa28.39■■■□□ 2.14
SREBF1-214ENST00000486311 FKBP1BP68106 108 aa28.39■■■□□ 2.14
SREBF1-214ENST00000486311 GTF2IP78347 998 aa28.39■■■□□ 2.14
SREBF1-214ENST00000486311 CCDC57Q2TAC2 916 aa28.39■■■□□ 2.14
SREBF1-214ENST00000486311 ABHD8Q96I13 439 aa28.38■■■□□ 2.13
SREBF1-214ENST00000486311 SLC10A3P09131 477 aa28.37■■■□□ 2.13
SREBF1-214ENST00000486311 KIF23Q02241 960 aaPredicted RBP28.37■■■□□ 2.13
SREBF1-214ENST00000486311 ZNF594Q96JF6 807 aaPredicted RBP28.37■■■□□ 2.13
SREBF1-214ENST00000486311 HDAC9Q9UKV0 1011 aa28.37■■■□□ 2.13
SREBF1-214ENST00000486311 SCAF8Q9UPN6 1271 aaKnown RBP28.37■■■□□ 2.13
SREBF1-214ENST00000486311 TAF7LQ5H9L4 462 aa28.36■■■□□ 2.13
SREBF1-214ENST00000486311 LDHAL6AQ6ZMR3 332 aa28.36■■■□□ 2.13
SREBF1-214ENST00000486311 KIAA0825Q8IV33 1275 aa28.36■■■□□ 2.13
SREBF1-214ENST00000486311 ZNF646O15015 1829 aaPredicted RBP28.36■■■□□ 2.13
SREBF1-214ENST00000486311 E9PSI1 815 aa28.35■■■□□ 2.13
SREBF1-214ENST00000486311 SASH1O94885 1247 aa28.35■■■□□ 2.13
SREBF1-214ENST00000486311 MRPL50Q8N5N7 158 aaKnown RBP28.35■■■□□ 2.13
SREBF1-214ENST00000486311 IL1R1P14778 569 aa28.34■■■□□ 2.13
SREBF1-214ENST00000486311 ZNF804AQ7Z570 1209 aa28.34■■■□□ 2.13
SREBF1-214ENST00000486311 KAZALD1Q96I82 304 aa28.34■■■□□ 2.13
SREBF1-214ENST00000486311 SUCLG2Q96I99 432 aa28.34■■■□□ 2.13
SREBF1-214ENST00000486311 ZBED3Q96IU2 234 aaPredicted RBP28.34■■■□□ 2.13
SREBF1-214ENST00000486311 CNNM1Q9NRU3 951 aa28.34■■■□□ 2.13
SREBF1-214ENST00000486311 UTYO14607 1347 aa28.33■■■□□ 2.13
SREBF1-214ENST00000486311 NBPF7P0C2Y1 421 aaPredicted RBP28.32■■■□□ 2.12
SREBF1-214ENST00000486311 PRAMEF18Q5VWM3 479 aa28.32■■■□□ 2.12
SREBF1-214ENST00000486311 RASAL3Q86YV0 1011 aa28.32■■■□□ 2.12
SREBF1-214ENST00000486311 CERS5Q8N5B7 392 aa28.32■■■□□ 2.12
SREBF1-214ENST00000486311 SAGE1Q9NXZ1 904 aa28.32■■■□□ 2.12
SREBF1-214ENST00000486311 PTPRCP08575 1304 aa28.31■■■□□ 2.12
SREBF1-214ENST00000486311 PAPPA2Q9BXP8 1791 aa28.31■■■□□ 2.12
SREBF1-214ENST00000486311 PLIN1O60240 522 aa28.3■■■□□ 2.12
SREBF1-214ENST00000486311 FKBP1AP62942 108 aaKnown RBP28.3■■■□□ 2.12
SREBF1-214ENST00000486311 MOB2Q70IA6 237 aa28.3■■■□□ 2.12
SREBF1-214ENST00000486311 APOBEC3FQ8IUX4 373 aaKnown RBP28.3■■■□□ 2.12
SREBF1-214ENST00000486311 CASP8AP2Q9UKL3 1982 aa28.3■■■□□ 2.12
SREBF1-214ENST00000486311 SLFN5Q08AF3 891 aa28.29■■■□□ 2.12
SREBF1-214ENST00000486311 SSH1Q8WYL5 1049 aa28.29■■■□□ 2.12
SREBF1-214ENST00000486311 CSRNP1Q96S65 589 aa28.29■■■□□ 2.12
SREBF1-214ENST00000486311 UBE2Q2LH0YL09 131 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms