RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 C22orf23Q9BZE7 217 aa17.49■□□□□ 0.39
COL9A1-207ENST00000486080 DIAPH3Q9NSV4 1193 aa17.49■□□□□ 0.39
COL9A1-207ENST00000486080 MYO5AQ9Y4I1 1855 aaKnown RBP17.49■□□□□ 0.39
COL9A1-207ENST00000486080 ZBTB7AO95365 584 aa17.49■□□□□ 0.39
COL9A1-207ENST00000486080 CHGBP05060 677 aa17.49■□□□□ 0.39
COL9A1-207ENST00000486080 GYG1P46976 350 aa17.49■□□□□ 0.39
COL9A1-207ENST00000486080 KCNJ4P48050 445 aa17.49■□□□□ 0.39
COL9A1-207ENST00000486080 R3HDM1Q15032 1099 aaKnown RBP17.49■□□□□ 0.39
COL9A1-207ENST00000486080 ANKIB1Q9P2G1 1089 aa17.49■□□□□ 0.39
COL9A1-207ENST00000486080 C2CD5Q86YS7 1000 aa17.48■□□□□ 0.39
COL9A1-207ENST00000486080 KBTBD3Q8NAB2 608 aa17.48■□□□□ 0.39
COL9A1-207ENST00000486080 FAM227BQ96M60 508 aa17.48■□□□□ 0.39
COL9A1-207ENST00000486080 UQCRFS1P1P0C7P4 283 aa17.47■□□□□ 0.39
COL9A1-207ENST00000486080 GPSM2P81274 684 aa17.47■□□□□ 0.39
COL9A1-207ENST00000486080 NMIQ13287 307 aaPredicted RBP17.47■□□□□ 0.39
COL9A1-207ENST00000486080 MASTLQ96GX5 879 aa17.47■□□□□ 0.39
COL9A1-207ENST00000486080 USP26Q9BXU7 913 aa17.47■□□□□ 0.39
COL9A1-207ENST00000486080 SRCAPQ6ZRS2 3230 aa17.47■□□□□ 0.39
COL9A1-207ENST00000486080 ZNF804BA4D1E1 1349 aa17.47■□□□□ 0.39
COL9A1-207ENST00000486080 LRRC37AA6NMS7 1700 aa17.47■□□□□ 0.39
COL9A1-207ENST00000486080 PPEF1O14829 653 aaPredicted RBP17.47■□□□□ 0.39
COL9A1-207ENST00000486080 SGSM2O43147 1006 aa17.47■□□□□ 0.39
COL9A1-207ENST00000486080 CHRNA5P30532 468 aa17.47■□□□□ 0.39
COL9A1-207ENST00000486080 RASGRF1Q13972 1273 aa17.47■□□□□ 0.39
COL9A1-207ENST00000486080 FAM84BQ96KN1 310 aaPredicted RBP17.47■□□□□ 0.39
COL9A1-207ENST00000486080 HMG20BQ9P0W2 317 aa17.47■□□□□ 0.39
COL9A1-207ENST00000486080 XDHP47989 1333 aa17.47■□□□□ 0.39
COL9A1-207ENST00000486080 A0A0D9SFI3 127 aa17.46■□□□□ 0.39
COL9A1-207ENST00000486080 REC8O95072 547 aa17.46■□□□□ 0.39
COL9A1-207ENST00000486080 TXNRD3Q86VQ6 643 aa17.46■□□□□ 0.39
COL9A1-207ENST00000486080 ZNF622Q969S3 477 aaKnown RBP eCLIP17.46■□□□□ 0.39
COL9A1-207ENST00000486080 IQSEC3Q9UPP2 1182 aaPredicted RBP17.46■□□□□ 0.39
COL9A1-207ENST00000486080 ATF5Q9Y2D1 282 aaPredicted RBP17.46■□□□□ 0.39
COL9A1-207ENST00000486080 MYH7P12883 1935 aa17.45■□□□□ 0.38
COL9A1-207ENST00000486080 IRS2Q9Y4H2 1338 aa17.45■□□□□ 0.38
COL9A1-207ENST00000486080 H0YIN7 160 aa17.45■□□□□ 0.38
COL9A1-207ENST00000486080 HIP1O00291 1037 aa17.45■□□□□ 0.38
COL9A1-207ENST00000486080 CYP2E1P05181 493 aaPredicted RBP17.45■□□□□ 0.38
COL9A1-207ENST00000486080 ALDH1B1P30837 517 aa17.45■□□□□ 0.38
COL9A1-207ENST00000486080 ANP32AP39687 249 aaKnown RBP17.45■□□□□ 0.38
COL9A1-207ENST00000486080 SLFNL1Q499Z3 407 aa17.45■□□□□ 0.38
COL9A1-207ENST00000486080 OLFM4Q6UX06 510 aa17.45■□□□□ 0.38
COL9A1-207ENST00000486080 SPATA5Q8NB90 893 aa17.45■□□□□ 0.38
COL9A1-207ENST00000486080 GPR101Q96P66 508 aaPredicted RBP17.45■□□□□ 0.38
COL9A1-207ENST00000486080 NSFL1CQ9UNZ2 370 aaKnown RBP17.45■□□□□ 0.38
COL9A1-207ENST00000486080 C10orf71Q711Q0 1435 aa17.45■□□□□ 0.38
COL9A1-207ENST00000486080 EIF5BO60841 1220 aaKnown RBP17.44■□□□□ 0.38
COL9A1-207ENST00000486080 FBXO33Q7Z6M2 555 aa17.44■□□□□ 0.38
COL9A1-207ENST00000486080 SP8Q8IXZ3 490 aa17.44■□□□□ 0.38
COL9A1-207ENST00000486080 ANO2Q9NQ90 1003 aa17.44■□□□□ 0.38
COL9A1-207ENST00000486080 LEMD3Q9Y2U8 911 aa17.44■□□□□ 0.38
COL9A1-207ENST00000486080 SLX4Q8IY92 1834 aa17.44■□□□□ 0.38
COL9A1-207ENST00000486080 LTBP1Q14766 1721 aa17.44■□□□□ 0.38
COL9A1-207ENST00000486080 RFX7Q2KHR2 1363 aa17.44■□□□□ 0.38
COL9A1-207ENST00000486080 RBM25P49756 843 aaKnown RBP17.44■□□□□ 0.38
COL9A1-207ENST00000486080 CAVIN4Q5BKX8 364 aa17.44■□□□□ 0.38
COL9A1-207ENST00000486080 RUFY2Q8WXA3 655 aa17.44■□□□□ 0.38
COL9A1-207ENST00000486080 PIH1D3Q9NQM4 214 aaKnown RBP17.44■□□□□ 0.38
COL9A1-207ENST00000486080 ATP6V0A2Q9Y487 856 aa17.44■□□□□ 0.38
COL9A1-207ENST00000486080 MYH13Q9UKX3 1938 aa17.43■□□□□ 0.38
COL9A1-207ENST00000486080 PSDA5PKW4 1024 aaPredicted RBP17.43■□□□□ 0.38
COL9A1-207ENST00000486080 STYK1Q6J9G0 422 aa17.43■□□□□ 0.38
COL9A1-207ENST00000486080 TMC4Q7Z404 712 aa17.43■□□□□ 0.38
COL9A1-207ENST00000486080 VPS37DQ86XT2 251 aa17.43■□□□□ 0.38
COL9A1-207ENST00000486080 UFL1O94874 794 aa17.42■□□□□ 0.38
COL9A1-207ENST00000486080 SEC62Q99442 399 aaKnown RBP17.42■□□□□ 0.38
COL9A1-207ENST00000486080 MTFR1LQ9H019 292 aa17.42■□□□□ 0.38
COL9A1-207ENST00000486080 COL1A1P02452 1464 aaPredicted RBP17.42■□□□□ 0.38
COL9A1-207ENST00000486080 RNF113AO15541 343 aaKnown RBP17.42■□□□□ 0.38
COL9A1-207ENST00000486080 HIBADHP31937 336 aaKnown RBP17.42■□□□□ 0.38
COL9A1-207ENST00000486080 LSG1Q9H089 658 aaKnown RBP17.42■□□□□ 0.38
COL9A1-207ENST00000486080 GNL3LQ9NVN8 582 aaKnown RBP17.42■□□□□ 0.38
COL9A1-207ENST00000486080 PODXL2Q9NZ53 605 aa17.42■□□□□ 0.38
COL9A1-207ENST00000486080 POLLQ9UGP5 575 aa17.42■□□□□ 0.38
COL9A1-207ENST00000486080 GGA1Q9UJY5 639 aa17.42■□□□□ 0.38
COL9A1-207ENST00000486080 DOCK2Q92608 1830 aa17.41■□□□□ 0.38
COL9A1-207ENST00000486080 KIF13BQ9NQT8 1826 aa17.41■□□□□ 0.38
COL9A1-207ENST00000486080 ZNF589Q86UQ0 364 aaPredicted RBP17.41■□□□□ 0.38
COL9A1-207ENST00000486080 DLEC1Q9Y238 1755 aa17.4■□□□□ 0.38
COL9A1-207ENST00000486080 ATP2B4P23634 1241 aa17.4■□□□□ 0.38
COL9A1-207ENST00000486080 TTF1Q15361 905 aaPredicted RBP17.4■□□□□ 0.38
COL9A1-207ENST00000486080 PRPF40BQ6NWY9 871 aaKnown RBP17.4■□□□□ 0.38
COL9A1-207ENST00000486080 TBC1D16Q8TBP0 767 aa17.4■□□□□ 0.38
COL9A1-207ENST00000486080 MED23Q9ULK4 1368 aa17.4■□□□□ 0.38
COL9A1-207ENST00000486080 IDH1O75874 414 aaKnown RBP17.4■□□□□ 0.38
COL9A1-207ENST00000486080 PTH1RQ03431 593 aa17.4■□□□□ 0.38
COL9A1-207ENST00000486080 ZMYM1Q5SVZ6 1142 aa17.4■□□□□ 0.38
COL9A1-207ENST00000486080 CCDC129Q6ZRS4 1044 aa17.4■□□□□ 0.38
COL9A1-207ENST00000486080 KIF2CQ99661 725 aa17.4■□□□□ 0.38
COL9A1-207ENST00000486080 RAD50Q92878 1312 aa17.39■□□□□ 0.37
COL9A1-207ENST00000486080 KIAA1211Q6ZU35 1233 aa17.39■□□□□ 0.37
COL9A1-207ENST00000486080 C15orf52Q6ZUT6 534 aaKnown RBP17.39■□□□□ 0.37
COL9A1-207ENST00000486080 TICAM2Q86XR7 235 aa17.39■□□□□ 0.37
COL9A1-207ENST00000486080 ZNF219Q9P2Y4 722 aaPredicted RBP17.39■□□□□ 0.37
COL9A1-207ENST00000486080 DUOX1Q9NRD9 1551 aa17.39■□□□□ 0.37
COL9A1-207ENST00000486080 C6orf229H3BNL8 230 aa17.38■□□□□ 0.37
COL9A1-207ENST00000486080 POLD1P28340 1107 aa17.38■□□□□ 0.37
COL9A1-207ENST00000486080 MCMDC2Q4G0Z9 681 aa17.38■□□□□ 0.37
COL9A1-207ENST00000486080 CNKSR1Q969H4 720 aa17.38■□□□□ 0.37
COL9A1-207ENST00000486080 WWC3Q9ULE0 1092 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms