RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 CEP135Q66GS9 1140 aa8.46□□□□□ -1.06
GCFC2-209ENST00000486016 LINC01387J3KSC0 135 aa8.45□□□□□ -1.06
GCFC2-209ENST00000486016 NFKBIEO00221 500 aa8.45□□□□□ -1.06
GCFC2-209ENST00000486016 SMNDC1O75940 238 aaKnown RBP eCLIP8.45□□□□□ -1.06
GCFC2-209ENST00000486016 NPR3P17342 541 aa8.45□□□□□ -1.06
GCFC2-209ENST00000486016 TAL1P17542 331 aaPredicted RBP8.45□□□□□ -1.06
GCFC2-209ENST00000486016 FSTP19883 344 aa8.45□□□□□ -1.06
GCFC2-209ENST00000486016 PHLDB3Q6NSJ2 640 aa8.45□□□□□ -1.06
GCFC2-209ENST00000486016 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.45□□□□□ -1.06
GCFC2-209ENST00000486016 EDEM1Q92611 657 aa8.45□□□□□ -1.06
GCFC2-209ENST00000486016 SPACA7Q96KW9 195 aa8.45□□□□□ -1.06
GCFC2-209ENST00000486016 POP1Q99575 1024 aaKnown RBP8.45□□□□□ -1.06
GCFC2-209ENST00000486016 LACRTQ9GZZ8 138 aa8.45□□□□□ -1.06
GCFC2-209ENST00000486016 ADAM19Q9H013 955 aa8.45□□□□□ -1.06
GCFC2-209ENST00000486016 KCNK4Q9NYG8 393 aa8.45□□□□□ -1.06
GCFC2-209ENST00000486016 PPP1R15AO75807 674 aaPredicted RBP8.44□□□□□ -1.06
GCFC2-209ENST00000486016 WISP1O95388 367 aa8.44□□□□□ -1.06
GCFC2-209ENST00000486016 PDGFAP04085 211 aa8.44□□□□□ -1.06
GCFC2-209ENST00000486016 CDC27P30260 824 aa8.44□□□□□ -1.06
GCFC2-209ENST00000486016 CD97P48960 835 aa8.44□□□□□ -1.06
GCFC2-209ENST00000486016 NOM1Q5C9Z4 860 aaKnown RBP8.44□□□□□ -1.06
GCFC2-209ENST00000486016 C1orf127Q8N9H9 656 aa8.44□□□□□ -1.06
GCFC2-209ENST00000486016 DCAF11Q8TEB1 546 aa8.44□□□□□ -1.06
GCFC2-209ENST00000486016 GTF3C2Q8WUA4 911 aaPredicted RBP8.44□□□□□ -1.06
GCFC2-209ENST00000486016 RPLP1P05386 114 aaKnown RBP8.43□□□□□ -1.06
GCFC2-209ENST00000486016 EPHA1P21709 976 aa8.43□□□□□ -1.06
GCFC2-209ENST00000486016 MPSTP25325 297 aa8.43□□□□□ -1.06
GCFC2-209ENST00000486016 MZF1P28698 734 aaPredicted RBP8.43□□□□□ -1.06
GCFC2-209ENST00000486016 EIF1AXP47813 144 aaKnown RBP8.43□□□□□ -1.06
GCFC2-209ENST00000486016 TXNDC11Q6PKC3 985 aa8.43□□□□□ -1.06
GCFC2-209ENST00000486016 ZNF438Q7Z4V0 828 aa8.43□□□□□ -1.06
GCFC2-209ENST00000486016 AGGF1Q8N302 714 aaeCLIP8.43□□□□□ -1.06
GCFC2-209ENST00000486016 UBL7Q96S82 380 aaPredicted RBP8.43□□□□□ -1.06
GCFC2-209ENST00000486016 CHRDQ9H2X0 955 aa8.43□□□□□ -1.06
GCFC2-209ENST00000486016 SH2B1Q9NRF2 756 aaPredicted RBP8.43□□□□□ -1.06
GCFC2-209ENST00000486016 KANSL3Q9P2N6 904 aa8.43□□□□□ -1.06
GCFC2-209ENST00000486016 A6NHS1 94 aa8.42□□□□□ -1.06
GCFC2-209ENST00000486016 ACPPP15309 386 aa8.42□□□□□ -1.06
GCFC2-209ENST00000486016 CD68P34810 354 aaPredicted RBP8.42□□□□□ -1.06
GCFC2-209ENST00000486016 DNM1Q05193 864 aaKnown RBP8.42□□□□□ -1.06
GCFC2-209ENST00000486016 NCAPG2Q86XI2 1143 aa8.42□□□□□ -1.06
GCFC2-209ENST00000486016 RNF114Q9Y508 228 aa8.42□□□□□ -1.06
GCFC2-209ENST00000486016 OAS3Q9Y6K5 1087 aaKnown RBP8.42□□□□□ -1.06
GCFC2-209ENST00000486016 FSCN2O14926 492 aa8.41□□□□□ -1.06
GCFC2-209ENST00000486016 FZD5Q13467 585 aa8.41□□□□□ -1.06
GCFC2-209ENST00000486016 MTMR3Q13615 1198 aa8.41□□□□□ -1.06
GCFC2-209ENST00000486016 DZANK1Q9NVP4 752 aa8.41□□□□□ -1.06
GCFC2-209ENST00000486016 ARID1BQ8NFD5 2236 aaPredicted RBP8.41□□□□□ -1.06
GCFC2-209ENST00000486016 ADAM11O75078 769 aa8.4□□□□□ -1.06
GCFC2-209ENST00000486016 KIAA1211Q6ZU35 1233 aa8.4□□□□□ -1.06
GCFC2-209ENST00000486016 CARD10Q9BWT7 1032 aa8.4□□□□□ -1.06
GCFC2-209ENST00000486016 KIAA1324LA8MWY0 1029 aaPredicted RBP8.39□□□□□ -1.07
GCFC2-209ENST00000486016 MED26O95402 600 aa8.39□□□□□ -1.07
GCFC2-209ENST00000486016 PTPRAP18433 802 aa8.39□□□□□ -1.07
GCFC2-209ENST00000486016 GP2P55259 537 aaKnown RBP8.39□□□□□ -1.07
GCFC2-209ENST00000486016 KLHL23Q8NBE8 558 aa8.39□□□□□ -1.07
GCFC2-209ENST00000486016 FOXD4L4Q8WXT5 416 aaPredicted RBP8.39□□□□□ -1.07
GCFC2-209ENST00000486016 HHIPQ96QV1 700 aa8.39□□□□□ -1.07
GCFC2-209ENST00000486016 CARNS1A5YM72 827 aa8.38□□□□□ -1.07
GCFC2-209ENST00000486016 DDX3YO15523 660 aaKnown RBP8.38□□□□□ -1.07
GCFC2-209ENST00000486016 CES1P23141 567 aa8.38□□□□□ -1.07
GCFC2-209ENST00000486016 CDC25BP30305 580 aa8.38□□□□□ -1.07
GCFC2-209ENST00000486016 ARMC10Q8N2F6 343 aa8.38□□□□□ -1.07
GCFC2-209ENST00000486016 KLHDC7BQ96G42 594 aa8.38□□□□□ -1.07
GCFC2-209ENST00000486016 POLIQ9UNA4 740 aa8.38□□□□□ -1.07
GCFC2-209ENST00000486016 GSC2O15499 205 aa8.37□□□□□ -1.07
GCFC2-209ENST00000486016 TRPA1O75762 1119 aa8.37□□□□□ -1.07
GCFC2-209ENST00000486016 GLB1P16278 677 aa8.37□□□□□ -1.07
GCFC2-209ENST00000486016 C8orf34Q49A92 452 aa8.37□□□□□ -1.07
GCFC2-209ENST00000486016 ALKBH2Q6NS38 261 aa8.37□□□□□ -1.07
GCFC2-209ENST00000486016 WNT8BQ93098 351 aa8.37□□□□□ -1.07
GCFC2-209ENST00000486016 SOX13Q9UN79 622 aa8.37□□□□□ -1.07
GCFC2-209ENST00000486016 H3BRJ5 948 aa8.36□□□□□ -1.07
GCFC2-209ENST00000486016 FZD6O60353 706 aa8.36□□□□□ -1.07
GCFC2-209ENST00000486016 TNFRSF21O75509 655 aa8.36□□□□□ -1.07
GCFC2-209ENST00000486016 PCSK2P16519 638 aa8.36□□□□□ -1.07
GCFC2-209ENST00000486016 ACAD11Q709F0 780 aa8.36□□□□□ -1.07
GCFC2-209ENST00000486016 TMEM102Q8N9M5 508 aaPredicted RBP8.36□□□□□ -1.07
GCFC2-209ENST00000486016 FAM46AQ96IP4 442 aaKnown RBP8.36□□□□□ -1.07
GCFC2-209ENST00000486016 SEC31BQ9NQW1 1179 aa8.36□□□□□ -1.07
GCFC2-209ENST00000486016 PDE2AO00408 941 aaPredicted RBP8.35□□□□□ -1.07
GCFC2-209ENST00000486016 EREGO14944 169 aa8.35□□□□□ -1.07
GCFC2-209ENST00000486016 PIP4K2BP78356 416 aa8.35□□□□□ -1.07
GCFC2-209ENST00000486016 PMEPA1Q969W9 287 aa8.35□□□□□ -1.07
GCFC2-209ENST00000486016 NXPE3Q969Y0 559 aa8.35□□□□□ -1.07
GCFC2-209ENST00000486016 OSGEPQ9NPF4 335 aa8.35□□□□□ -1.07
GCFC2-209ENST00000486016 RAXQ9Y2V3 346 aa8.35□□□□□ -1.07
GCFC2-209ENST00000486016 TGFB1P01137 390 aa8.34□□□□□ -1.07
GCFC2-209ENST00000486016 FKBP4Q02790 459 aaKnown RBP eCLIP8.34□□□□□ -1.07
GCFC2-209ENST00000486016 DUOXA2Q1HG44 320 aa8.34□□□□□ -1.07
GCFC2-209ENST00000486016 HGSNATQ68CP4 663 aa8.34□□□□□ -1.07
GCFC2-209ENST00000486016 FAM117BQ6P1L5 589 aa8.34□□□□□ -1.07
GCFC2-209ENST00000486016 UBASH3BQ8TF42 649 aa8.34□□□□□ -1.07
GCFC2-209ENST00000486016 FAM13AO94988 1023 aa8.33□□□□□ -1.08
GCFC2-209ENST00000486016 IGLV1-40P01703 118 aa8.33□□□□□ -1.08
GCFC2-209ENST00000486016 SF3B2Q13435 895 aaKnown RBP8.33□□□□□ -1.08
GCFC2-209ENST00000486016 VN1R5Q7Z5H4 357 aa8.33□□□□□ -1.08
GCFC2-209ENST00000486016 ZKSCAN3Q9BRR0 538 aa8.33□□□□□ -1.08
GCFC2-209ENST00000486016 ECM1Q16610 540 aa8.32□□□□□ -1.08
GCFC2-209ENST00000486016 PEAR1Q5VY43 1037 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms