RNA–Protein interactions for RNA: ENST00000485901.1

HLA-DOA-204, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-204ENST00000485901 PITPNM2Q9BZ72 1349 aa15.16■□□□□ 0.02
HLA-DOA-204ENST00000485901 ZNF280AP59817 542 aaPredicted RBP15.15■□□□□ 0.02
HLA-DOA-204ENST00000485901 GPSM2P81274 684 aa15.15■□□□□ 0.02
HLA-DOA-204ENST00000485901 DGKZQ13574 1117 aa15.15■□□□□ 0.02
HLA-DOA-204ENST00000485901 RTL9Q8NET4 1388 aa15.14■□□□□ 0.01
HLA-DOA-204ENST00000485901 ZNF157P51786 506 aaPredicted RBP15.14■□□□□ 0.01
HLA-DOA-204ENST00000485901 KIF4BQ2VIQ3 1234 aa15.14■□□□□ 0.01
HLA-DOA-204ENST00000485901 TBC1D10BQ4KMP7 808 aaPredicted RBP15.14■□□□□ 0.01
HLA-DOA-204ENST00000485901 PODNQ7Z5L7 613 aa15.14■□□□□ 0.01
HLA-DOA-204ENST00000485901 C9orf78Q9NZ63 289 aaPredicted RBP15.14■□□□□ 0.01
HLA-DOA-204ENST00000485901 TSKSQ9UJT2 592 aa15.14■□□□□ 0.01
HLA-DOA-204ENST00000485901 NOB1Q9ULX3 412 aaKnown RBP15.14■□□□□ 0.01
HLA-DOA-204ENST00000485901 SCN9AQ15858 1988 aa15.14■□□□□ 0.01
HLA-DOA-204ENST00000485901 G3V3G9 751 aa15.13■□□□□ 0.01
HLA-DOA-204ENST00000485901 GRM8O00222 908 aa15.13■□□□□ 0.01
HLA-DOA-204ENST00000485901 RIMBP2O15034 1052 aa15.13■□□□□ 0.01
HLA-DOA-204ENST00000485901 SLC10A3P09131 477 aa15.13■□□□□ 0.01
HLA-DOA-204ENST00000485901 CTSWP56202 376 aa15.13■□□□□ 0.01
HLA-DOA-204ENST00000485901 DCAF8Q5TAQ9 597 aa15.13■□□□□ 0.01
HLA-DOA-204ENST00000485901 PLA2G12BQ9BX93 195 aa15.13■□□□□ 0.01
HLA-DOA-204ENST00000485901 API5Q9BZZ5 524 aaKnown RBP15.13■□□□□ 0.01
HLA-DOA-204ENST00000485901 GGA1Q9UJY5 639 aa15.13■□□□□ 0.01
HLA-DOA-204ENST00000485901 SHTN1A0MZ66 631 aa15.12■□□□□ 0.01
HLA-DOA-204ENST00000485901 IPO8O15397 1037 aaKnown RBP15.12■□□□□ 0.01
HLA-DOA-204ENST00000485901 CASP7P55210 303 aa15.12■□□□□ 0.01
HLA-DOA-204ENST00000485901 KIF23Q02241 960 aaPredicted RBP15.12■□□□□ 0.01
HLA-DOA-204ENST00000485901 RSBN1LQ6PCB5 846 aaPredicted RBP15.12■□□□□ 0.01
HLA-DOA-204ENST00000485901 TTLL11Q8NHH1 800 aa15.12■□□□□ 0.01
HLA-DOA-204ENST00000485901 ARHGAP45Q92619 1136 aa15.12■□□□□ 0.01
HLA-DOA-204ENST00000485901 ANKIB1Q9P2G1 1089 aa15.12■□□□□ 0.01
HLA-DOA-204ENST00000485901 ATP2B4P23634 1241 aa15.11■□□□□ 0.01
HLA-DOA-204ENST00000485901 PKN2Q16513 984 aaKnown RBP15.11■□□□□ 0.01
HLA-DOA-204ENST00000485901 NOM1Q5C9Z4 860 aaKnown RBP15.11■□□□□ 0.01
HLA-DOA-204ENST00000485901 CCDC85AQ96PX6 553 aaPredicted RBP15.11■□□□□ 0.01
HLA-DOA-204ENST00000485901 SEC31BQ9NQW1 1179 aa15.11■□□□□ 0.01
HLA-DOA-204ENST00000485901 RNF186Q9NXI6 227 aa15.11■□□□□ 0.01
HLA-DOA-204ENST00000485901 XDHP47989 1333 aa15.11■□□□□ 0.01
HLA-DOA-204ENST00000485901 KIF16BQ96L93 1317 aa15.11■□□□□ 0.01
HLA-DOA-204ENST00000485901 EGFRP00533 1210 aa15.1■□□□□ 0.01
HLA-DOA-204ENST00000485901 CSF1RP07333 972 aa15.1■□□□□ 0.01
HLA-DOA-204ENST00000485901 DOK7Q18PE1 504 aa15.1■□□□□ 0.01
HLA-DOA-204ENST00000485901 ANKRD18AQ8IVF6 992 aa15.1■□□□□ 0.01
HLA-DOA-204ENST00000485901 CSRNP1Q96S65 589 aa15.1■□□□□ 0.01
HLA-DOA-204ENST00000485901 ZIC5Q96T25 663 aa15.1■□□□□ 0.01
HLA-DOA-204ENST00000485901 GMLQ99445 158 aa15.1■□□□□ 0.01
HLA-DOA-204ENST00000485901 CDC5LQ99459 802 aaKnown RBP15.1■□□□□ 0.01
HLA-DOA-204ENST00000485901 GGA3Q9NZ52 723 aa15.1■□□□□ 0.01
HLA-DOA-204ENST00000485901 PAPPA2Q9BXP8 1791 aa15.1■□□□□ 0.01
HLA-DOA-204ENST00000485901 TNRC18O15417 2968 aaPredicted RBP15.09■□□□□ 0.01
HLA-DOA-204ENST00000485901 BCAR3O75815 825 aa15.09■□□□□ 0.01
HLA-DOA-204ENST00000485901 UFL1O94874 794 aa15.09■□□□□ 0.01
HLA-DOA-204ENST00000485901 USP17L8P0C7I0 530 aa15.09■□□□□ 0.01
HLA-DOA-204ENST00000485901 CCT4P50991 539 aaKnown RBP15.09■□□□□ 0.01
HLA-DOA-204ENST00000485901 RBM26Q5T8P6 1007 aaKnown RBP15.09■□□□□ 0.01
HLA-DOA-204ENST00000485901 CDCA5Q96FF9 252 aa15.09■□□□□ 0.01
HLA-DOA-204ENST00000485901 GREM2Q9H772 168 aa15.09■□□□□ 0.01
HLA-DOA-204ENST00000485901 KCNQ5Q9NR82 932 aa15.09■□□□□ 0.01
HLA-DOA-204ENST00000485901 MYO3BQ8WXR4 1341 aa15.09■□□□□ 0.01
HLA-DOA-204ENST00000485901 MYH3P11055 1940 aa15.09■□□□□ 0.01
HLA-DOA-204ENST00000485901 USP17L3A6NCW0 530 aa15.08■□□□□ 0
HLA-DOA-204ENST00000485901 USP17L4A6NCW7 530 aa15.08■□□□□ 0
HLA-DOA-204ENST00000485901 ADM5C9JUS6 153 aa15.08■□□□□ 0
HLA-DOA-204ENST00000485901 FOXO4P98177 505 aa15.08■□□□□ 0
HLA-DOA-204ENST00000485901 SCARF1Q14162 830 aa15.08■□□□□ 0
HLA-DOA-204ENST00000485901 USP17L1Q7RTZ2 530 aa15.08■□□□□ 0
HLA-DOA-204ENST00000485901 CTU1Q7Z7A3 348 aaKnown RBP15.08■□□□□ 0
HLA-DOA-204ENST00000485901 MYOZ2Q9NPC6 264 aa15.08■□□□□ 0
HLA-DOA-204ENST00000485901 UTYO14607 1347 aa15.08■□□□□ 0
HLA-DOA-204ENST00000485901 TRPA1O75762 1119 aa15.07■□□□□ 0
HLA-DOA-204ENST00000485901 NBPF7P0C2Y1 421 aaPredicted RBP15.07■□□□□ 0
HLA-DOA-204ENST00000485901 FRAT1Q92837 279 aaPredicted RBP15.07■□□□□ 0
HLA-DOA-204ENST00000485901 BSDC1Q9NW68 430 aaPredicted RBP15.07■□□□□ 0
HLA-DOA-204ENST00000485901 MED23Q9ULK4 1368 aa15.07■□□□□ 0
HLA-DOA-204ENST00000485901 ANKRD18BA2A2Z9 1011 aa15.06■□□□□ 0
HLA-DOA-204ENST00000485901 ITGA6P23229 1130 aa15.06■□□□□ 0
HLA-DOA-204ENST00000485901 IGHMBP2P38935 993 aaKnown RBP15.06■□□□□ 0
HLA-DOA-204ENST00000485901 ANGEL2Q5VTE6 544 aaKnown RBP15.06■□□□□ 0
HLA-DOA-204ENST00000485901 LMBR1LQ6UX01 489 aa15.06■□□□□ 0
HLA-DOA-204ENST00000485901 ATF7IPQ6VMQ6 1270 aa15.06■□□□□ 0
HLA-DOA-204ENST00000485901 OGFOD1Q8N543 542 aa15.06■□□□□ 0
HLA-DOA-204ENST00000485901 USP44Q9H0E7 712 aa15.06■□□□□ 0
HLA-DOA-204ENST00000485901 HDAC5Q9UQL6 1122 aa15.06■□□□□ 0
HLA-DOA-204ENST00000485901 TM4SF4P48230 202 aa15.05■□□□□ -0
HLA-DOA-204ENST00000485901 IFIT5Q13325 482 aaKnown RBP15.05■□□□□ -0
HLA-DOA-204ENST00000485901 CCDC57Q2TAC2 916 aa15.05■□□□□ -0
HLA-DOA-204ENST00000485901 STRIP1Q5VSL9 837 aa15.05■□□□□ -0
HLA-DOA-204ENST00000485901 ZKSCAN2Q63HK3 967 aa15.05■□□□□ -0
HLA-DOA-204ENST00000485901 RASAL3Q86YV0 1011 aa15.05■□□□□ -0
HLA-DOA-204ENST00000485901 SUCLG2Q96I99 432 aa15.05■□□□□ -0
HLA-DOA-204ENST00000485901 MPHOSPH8Q99549 860 aa15.05■□□□□ -0
HLA-DOA-204ENST00000485901 CFHR5Q9BXR6 569 aa15.05■□□□□ -0
HLA-DOA-204ENST00000485901 CHMP3Q9Y3E7 222 aa15.05■□□□□ -0
HLA-DOA-204ENST00000485901 COL4A1P02462 1669 aa15.04■□□□□ -0
HLA-DOA-204ENST00000485901 NF2P35240 595 aa15.04■□□□□ -0
HLA-DOA-204ENST00000485901 EPHA10Q5JZY3 1008 aa15.04■□□□□ -0
HLA-DOA-204ENST00000485901 INTS3Q68E01 1043 aaKnown RBP15.04■□□□□ -0
HLA-DOA-204ENST00000485901 DLK2Q6UY11 383 aa15.04■□□□□ -0
HLA-DOA-204ENST00000485901 COA1Q9GZY4 146 aa15.04■□□□□ -0
HLA-DOA-204ENST00000485901 LEMD3Q9Y2U8 911 aa15.04■□□□□ -0
HLA-DOA-204ENST00000485901 UNCXA6NJT0 531 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms