RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 FKBP5Q13451 457 aaPredicted RBP5.6□□□□□ -1.51
PRPF38B-205ENST00000485810 SLC51AQ86UW1 340 aa5.6□□□□□ -1.51
PRPF38B-205ENST00000485810 AGGF1Q8N302 714 aaeCLIP5.6□□□□□ -1.513e-11■■■■□ 21.7
PRPF38B-205ENST00000485810 VTI1AQ96AJ9 217 aa5.6□□□□□ -1.51
PRPF38B-205ENST00000485810 PCMTD2Q9NV79 361 aa5.6□□□□□ -1.51
PRPF38B-205ENST00000485810 HMGXB3Q12766 1538 aa5.6□□□□□ -1.51
PRPF38B-205ENST00000485810 ERICH3Q5RHP9 1530 aa5.6□□□□□ -1.51
PRPF38B-205ENST00000485810 BIVM-ERCC5R4GMW8 1640 aa5.59□□□□□ -1.51
PRPF38B-205ENST00000485810 CLIP1P30622 1438 aa5.59□□□□□ -1.51
PRPF38B-205ENST00000485810 HOXD8P13378 290 aaPredicted RBP5.59□□□□□ -1.51
PRPF38B-205ENST00000485810 EIF2AK2P19525 551 aaKnown RBP5.59□□□□□ -1.51
PRPF38B-205ENST00000485810 FAM69CQ0P6D2 419 aa5.59□□□□□ -1.51
PRPF38B-205ENST00000485810 FAM26DQ5JW98 314 aa5.59□□□□□ -1.51
PRPF38B-205ENST00000485810 ADAMTSL4Q6UY14 1074 aa5.59□□□□□ -1.51
PRPF38B-205ENST00000485810 FAM177A1Q8N128 213 aaPredicted RBP5.59□□□□□ -1.51
PRPF38B-205ENST00000485810 IL22RA1Q8N6P7 574 aa5.59□□□□□ -1.51
PRPF38B-205ENST00000485810 CCER1Q8TC90 406 aaPredicted RBP5.59□□□□□ -1.51
PRPF38B-205ENST00000485810 FMNL2Q96PY5 1086 aa5.59□□□□□ -1.51
PRPF38B-205ENST00000485810 MKNK1Q9BUB5 465 aa5.59□□□□□ -1.51
PRPF38B-205ENST00000485810 SAP130Q9H0E3 1048 aa5.59□□□□□ -1.51
PRPF38B-205ENST00000485810 MRPL18Q9H0U6 180 aaKnown RBP5.59□□□□□ -1.51
PRPF38B-205ENST00000485810 TRIM33Q9UPN9 1127 aa5.59□□□□□ -1.51
PRPF38B-205ENST00000485810 XYLBO75191 536 aa5.58□□□□□ -1.52
PRPF38B-205ENST00000485810 TMEM164Q5U3C3 297 aa5.58□□□□□ -1.52
PRPF38B-205ENST00000485810 GDF6Q6KF10 455 aaPredicted RBP5.58□□□□□ -1.52
PRPF38B-205ENST00000485810 ARMC10Q8N2F6 343 aa5.58□□□□□ -1.52
PRPF38B-205ENST00000485810 GALNT11Q8NCW6 608 aa5.58□□□□□ -1.52
PRPF38B-205ENST00000485810 ZNF428Q96B54 188 aa5.58□□□□□ -1.52
PRPF38B-205ENST00000485810 KCNK4Q9NYG8 393 aa5.58□□□□□ -1.52
PRPF38B-205ENST00000485810 OAS3Q9Y6K5 1087 aaKnown RBP5.58□□□□□ -1.52
PRPF38B-205ENST00000485810 PRXQ9BXM0 1461 aa5.58□□□□□ -1.52
PRPF38B-205ENST00000485810 CLSPNQ9HAW4 1339 aa5.58□□□□□ -1.52
PRPF38B-205ENST00000485810 ACIN1Q9UKV3 1341 aaKnown RBP5.58□□□□□ -1.52
PRPF38B-205ENST00000485810 KIAA1324LA8MWY0 1029 aaPredicted RBP5.57□□□□□ -1.52
PRPF38B-205ENST00000485810 FOXO3O43524 673 aa5.57□□□□□ -1.52
PRPF38B-205ENST00000485810 WISP1O95388 367 aa5.57□□□□□ -1.52
PRPF38B-205ENST00000485810 TGFB1P01137 390 aa5.57□□□□□ -1.52
PRPF38B-205ENST00000485810 NAA30Q147X3 362 aaPredicted RBP5.57□□□□□ -1.52
PRPF38B-205ENST00000485810 OCLNQ16625 522 aa5.57□□□□□ -1.52
PRPF38B-205ENST00000485810 COX20Q5RI15 118 aa5.57□□□□□ -1.52
PRPF38B-205ENST00000485810 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.57□□□□□ -1.52
PRPF38B-205ENST00000485810 TREML1Q86YW5 311 aa5.57□□□□□ -1.52
PRPF38B-205ENST00000485810 RGL4Q8IZJ4 473 aa5.57□□□□□ -1.52
PRPF38B-205ENST00000485810 CMTR1Q8N1G2 835 aaKnown RBP5.57□□□□□ -1.52
PRPF38B-205ENST00000485810 CCDC97Q96F63 343 aaPredicted RBP5.57□□□□□ -1.52
PRPF38B-205ENST00000485810 NSUN5Q96P11 429 aaKnown RBP5.57□□□□□ -1.52
PRPF38B-205ENST00000485810 IGLV1-40P01703 118 aa5.56□□□□□ -1.52
PRPF38B-205ENST00000485810 TRIP4Q15650 581 aaPredicted RBP5.56□□□□□ -1.52
PRPF38B-205ENST00000485810 COL13A1Q5TAT6 717 aaPredicted RBP5.56□□□□□ -1.52
PRPF38B-205ENST00000485810 GZF1Q9H116 711 aaPredicted RBP5.56□□□□□ -1.52
PRPF38B-205ENST00000485810 SLAIN2Q9P270 581 aa5.56□□□□□ -1.52
PRPF38B-205ENST00000485810 RAXQ9Y2V3 346 aa5.56□□□□□ -1.52
PRPF38B-205ENST00000485810 RAPGEF2Q9Y4G8 1499 aa5.56□□□□□ -1.52
PRPF38B-205ENST00000485810 ATG7O95352 703 aa5.55□□□□□ -1.52
PRPF38B-205ENST00000485810 SOX18P35713 384 aa5.55□□□□□ -1.52
PRPF38B-205ENST00000485810 SCNN1AP37088 669 aa5.55□□□□□ -1.52
PRPF38B-205ENST00000485810 FGD1P98174 961 aa5.55□□□□□ -1.52
PRPF38B-205ENST00000485810 ELOAQ14241 798 aaKnown RBP5.55□□□□□ -1.52
PRPF38B-205ENST00000485810 ZDHHC13Q8IUH4 622 aa5.55□□□□□ -1.52
PRPF38B-205ENST00000485810 PSAPP07602 524 aa5.55□□□□□ -1.52
PRPF38B-205ENST00000485810 IRAK1P51617 712 aa5.55□□□□□ -1.52
PRPF38B-205ENST00000485810 SWI5Q1ZZU3 235 aa5.55□□□□□ -1.52
PRPF38B-205ENST00000485810 DIEXFQ68CQ4 756 aaKnown RBP5.55□□□□□ -1.52
PRPF38B-205ENST00000485810 ETFBKMTQ8IXQ9 262 aa5.55□□□□□ -1.52
PRPF38B-205ENST00000485810 CCDC82Q8N4S0 544 aa5.55□□□□□ -1.52
PRPF38B-205ENST00000485810 PBXIP1Q96AQ6 731 aa5.55□□□□□ -1.52
PRPF38B-205ENST00000485810 KRTAP4-7Q9BYR0 210 aa5.55□□□□□ -1.52
PRPF38B-205ENST00000485810 CWC22Q9HCG8 908 aaKnown RBP5.55□□□□□ -1.52
PRPF38B-205ENST00000485810 SRA1Q9HD15 236 aaKnown RBP5.55□□□□□ -1.52
PRPF38B-205ENST00000485810 SERPINA10Q9UK55 444 aa5.55□□□□□ -1.52
PRPF38B-205ENST00000485810 CFTRP13569 1480 aa5.54□□□□□ -1.52
PRPF38B-205ENST00000485810 PRR19A6NJB7 356 aa5.54□□□□□ -1.52
PRPF38B-205ENST00000485810 GLB1P16278 677 aa5.54□□□□□ -1.52
PRPF38B-205ENST00000485810 TAL1P17542 331 aaPredicted RBP5.54□□□□□ -1.52
PRPF38B-205ENST00000485810 SPINK2P20155 84 aa5.54□□□□□ -1.52
PRPF38B-205ENST00000485810 CANXP27824 592 aaKnown RBP5.54□□□□□ -1.52
PRPF38B-205ENST00000485810 CERS3Q8IU89 383 aa5.54□□□□□ -1.52
PRPF38B-205ENST00000485810 CARNS1A5YM72 827 aa5.53□□□□□ -1.52
PRPF38B-205ENST00000485810 LINC01387J3KSC0 135 aa5.53□□□□□ -1.52
PRPF38B-205ENST00000485810 GHRHP01286 108 aa5.53□□□□□ -1.52
PRPF38B-205ENST00000485810 ARID4AP29374 1257 aaPredicted RBP5.53□□□□□ -1.52
PRPF38B-205ENST00000485810 GP2P55259 537 aaKnown RBP5.53□□□□□ -1.52
PRPF38B-205ENST00000485810 ATP11AP98196 1134 aa5.53□□□□□ -1.52
PRPF38B-205ENST00000485810 TXNDC11Q6PKC3 985 aa5.53□□□□□ -1.52
PRPF38B-205ENST00000485810 KIAA1211Q6ZU35 1233 aa5.53□□□□□ -1.52
PRPF38B-205ENST00000485810 MAP4K3Q8IVH8 894 aa5.53□□□□□ -1.52
PRPF38B-205ENST00000485810 FAM46AQ96IP4 442 aaKnown RBP5.53□□□□□ -1.52
PRPF38B-205ENST00000485810 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.53□□□□□ -1.52
PRPF38B-205ENST00000485810 CXXC1Q9P0U4 656 aaPredicted RBP5.53□□□□□ -1.52
PRPF38B-205ENST00000485810 CUX2O14529 1486 aa5.52□□□□□ -1.53
PRPF38B-205ENST00000485810 ADAM11O75078 769 aa5.52□□□□□ -1.53
PRPF38B-205ENST00000485810 CENPBP07199 599 aaPredicted RBP5.52□□□□□ -1.53
PRPF38B-205ENST00000485810 C16orf46Q6P387 395 aa5.52□□□□□ -1.53
PRPF38B-205ENST00000485810 KIF27Q86VH2 1401 aa5.52□□□□□ -1.53
PRPF38B-205ENST00000485810 NLRP13Q86W25 1043 aa5.52□□□□□ -1.53
PRPF38B-205ENST00000485810 COL26A1Q96A83 441 aa5.52□□□□□ -1.53
PRPF38B-205ENST00000485810 C7orf69Q9H7B7 122 aa5.52□□□□□ -1.53
PRPF38B-205ENST00000485810 STOML1Q9UBI4 398 aa5.52□□□□□ -1.53
PRPF38B-205ENST00000485810 SEPT3Q9UH03 358 aa5.52□□□□□ -1.53
PRPF38B-205ENST00000485810 PPME1Q9Y570 386 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms