RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 HDAC1Q13547 482 aaPredicted RBP24.62■■□□□ 1.53
COL6A2-208ENST00000485591 ATP2B3Q16720 1220 aa24.61■■□□□ 1.53
COL6A2-208ENST00000485591 TXNRD3Q86VQ6 643 aa24.61■■□□□ 1.53
COL6A2-208ENST00000485591 NIM1KQ8IY84 436 aa24.61■■□□□ 1.53
COL6A2-208ENST00000485591 JDP2Q8WYK2 163 aa24.61■■□□□ 1.53
COL6A2-208ENST00000485591 LPIN2Q92539 896 aa24.61■■□□□ 1.53
COL6A2-208ENST00000485591 AKAP2Q9Y2D5 859 aa24.61■■□□□ 1.53
COL6A2-208ENST00000485591 RAB11FIP3O75154 756 aa24.6■■□□□ 1.53
COL6A2-208ENST00000485591 IFIT1P09914 478 aaKnown RBP24.6■■□□□ 1.53
COL6A2-208ENST00000485591 SLC5A1P13866 664 aa24.6■■□□□ 1.53
COL6A2-208ENST00000485591 DCTPP1Q9H773 170 aa24.6■■□□□ 1.53
COL6A2-208ENST00000485591 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.6■■□□□ 1.53
COL6A2-208ENST00000485591 MYH13Q9UKX3 1938 aa24.6■■□□□ 1.53
COL6A2-208ENST00000485591 ZNF646O15015 1829 aaPredicted RBP24.6■■□□□ 1.53
COL6A2-208ENST00000485591 SCN9AQ15858 1988 aa24.6■■□□□ 1.53
COL6A2-208ENST00000485591 GPR108Q9NPR9 543 aa24.59■■□□□ 1.53
COL6A2-208ENST00000485591 RHPN1Q8TCX5 695 aa24.58■■□□□ 1.53
COL6A2-208ENST00000485591 KIF1BPQ96EK5 621 aa24.58■■□□□ 1.53
COL6A2-208ENST00000485591 COA1Q9GZY4 146 aa24.58■■□□□ 1.53
COL6A2-208ENST00000485591 A0A1B0GUL7 405 aa24.57■■□□□ 1.52
COL6A2-208ENST00000485591 FZD9O00144 591 aa24.57■■□□□ 1.52
COL6A2-208ENST00000485591 ECE2O60344 883 aa24.57■■□□□ 1.52
COL6A2-208ENST00000485591 DOK7Q18PE1 504 aa24.57■■□□□ 1.52
COL6A2-208ENST00000485591 ZNF804AQ7Z570 1209 aa24.57■■□□□ 1.52
COL6A2-208ENST00000485591 DBNDD1Q9H9R9 158 aa24.57■■□□□ 1.52
COL6A2-208ENST00000485591 ZNRF3Q9ULT6 936 aa24.57■■□□□ 1.52
COL6A2-208ENST00000485591 G3V3G9 751 aa24.56■■□□□ 1.52
COL6A2-208ENST00000485591 TNNI3KQ59H18 835 aa24.56■■□□□ 1.52
COL6A2-208ENST00000485591 DCAF8Q5TAQ9 597 aa24.56■■□□□ 1.52
COL6A2-208ENST00000485591 RWDD1Q9H446 243 aaPredicted RBP24.56■■□□□ 1.52
COL6A2-208ENST00000485591 FPGT-TNNI3KV9GXZ4 949 aa24.56■■□□□ 1.52
COL6A2-208ENST00000485591 YDJCA8MPS7 323 aa24.55■■□□□ 1.52
COL6A2-208ENST00000485591 PODNQ7Z5L7 613 aa24.55■■□□□ 1.52
COL6A2-208ENST00000485591 FAM84BQ96KN1 310 aaPredicted RBP24.55■■□□□ 1.52
COL6A2-208ENST00000485591 APBB1O00213 710 aa24.54■■□□□ 1.52
COL6A2-208ENST00000485591 GYG1P46976 350 aa24.54■■□□□ 1.52
COL6A2-208ENST00000485591 CAVIN4Q5BKX8 364 aa24.54■■□□□ 1.52
COL6A2-208ENST00000485591 LRRCC1Q9C099 1032 aa24.54■■□□□ 1.52
COL6A2-208ENST00000485591 HIBADHP31937 336 aaKnown RBP24.53■■□□□ 1.52
COL6A2-208ENST00000485591 TIMM10P62072 90 aa24.53■■□□□ 1.52
COL6A2-208ENST00000485591 FBXO33Q7Z6M2 555 aa24.53■■□□□ 1.52
COL6A2-208ENST00000485591 GCC1Q96CN9 775 aa24.53■■□□□ 1.52
COL6A2-208ENST00000485591 CD209Q9NNX6 404 aa24.53■■□□□ 1.52
COL6A2-208ENST00000485591 ZNF541Q9H0D2 1346 aa24.53■■□□□ 1.52
COL6A2-208ENST00000485591 IGHDP01880 384 aa24.52■■□□□ 1.52
COL6A2-208ENST00000485591 IL1R1P14778 569 aa24.52■■□□□ 1.52
COL6A2-208ENST00000485591 ADORA1P30542 326 aa24.52■■□□□ 1.52
COL6A2-208ENST00000485591 EIF6P56537 245 aaKnown RBP24.52■■□□□ 1.52
COL6A2-208ENST00000485591 XAGE2Q96GT9 111 aa24.52■■□□□ 1.52
COL6A2-208ENST00000485591 NEUROD6Q96NK8 337 aa24.52■■□□□ 1.52
COL6A2-208ENST00000485591 IL1RAPL2Q9NP60 686 aa24.52■■□□□ 1.52
COL6A2-208ENST00000485591 VPS37DQ86XT2 251 aa24.51■■□□□ 1.51
COL6A2-208ENST00000485591 CLASRPQ8N2M8 674 aaKnown RBP24.51■■□□□ 1.51
COL6A2-208ENST00000485591 EAF2Q96CJ1 260 aaPredicted RBP24.51■■□□□ 1.51
COL6A2-208ENST00000485591 BCAMP50895 628 aa24.5■■□□□ 1.51
COL6A2-208ENST00000485591 CXCL9Q07325 125 aa24.5■■□□□ 1.51
COL6A2-208ENST00000485591 SMC5Q8IY18 1101 aa24.5■■□□□ 1.51
COL6A2-208ENST00000485591 TDRD7Q8NHU6 1098 aaKnown RBP24.5■■□□□ 1.51
COL6A2-208ENST00000485591 CIAPIN1Q6FI81 312 aa24.49■■□□□ 1.51
COL6A2-208ENST00000485591 AACSQ86V21 672 aa24.49■■□□□ 1.51
COL6A2-208ENST00000485591 WDR90Q96KV7 1748 aa24.49■■□□□ 1.51
COL6A2-208ENST00000485591 ZBTB22O15209 634 aa24.48■■□□□ 1.51
COL6A2-208ENST00000485591 RAD17O75943 681 aa24.48■■□□□ 1.51
COL6A2-208ENST00000485591 CCDC102BQ68D86 513 aa24.48■■□□□ 1.51
COL6A2-208ENST00000485591 DPY19L2Q6NUT2 758 aa24.48■■□□□ 1.51
COL6A2-208ENST00000485591 DBNDD2Q9BQY9 259 aa24.48■■□□□ 1.51
COL6A2-208ENST00000485591 KCNQ5Q9NR82 932 aa24.48■■□□□ 1.51
COL6A2-208ENST00000485591 DBNLQ9UJU6 430 aaKnown RBP24.48■■□□□ 1.51
COL6A2-208ENST00000485591 GLTPD2A6NH11 291 aa24.47■■□□□ 1.51
COL6A2-208ENST00000485591 PHKA1P46020 1223 aa24.47■■□□□ 1.51
COL6A2-208ENST00000485591 TNIP1Q15025 636 aa24.47■■□□□ 1.51
COL6A2-208ENST00000485591 ERICH6BQ5W0A0 696 aa24.47■■□□□ 1.51
COL6A2-208ENST00000485591 GPC2Q8N158 579 aa24.47■■□□□ 1.51
COL6A2-208ENST00000485591 CCDC8Q9H0W5 538 aaPredicted RBP24.47■■□□□ 1.51
COL6A2-208ENST00000485591 USP17L3A6NCW0 530 aa24.46■■□□□ 1.51
COL6A2-208ENST00000485591 USP17L4A6NCW7 530 aa24.46■■□□□ 1.51
COL6A2-208ENST00000485591 SMARCA5O60264 1052 aaPredicted RBP24.46■■□□□ 1.51
COL6A2-208ENST00000485591 GORABQ5T7V8 394 aa24.46■■□□□ 1.51
COL6A2-208ENST00000485591 USP17L1Q7RTZ2 530 aa24.46■■□□□ 1.51
COL6A2-208ENST00000485591 GNL3LQ9NVN8 582 aaKnown RBP24.46■■□□□ 1.51
COL6A2-208ENST00000485591 TLR7Q9NYK1 1049 aaKnown RBP24.46■■□□□ 1.51
COL6A2-208ENST00000485591 COL1A1P02452 1464 aaPredicted RBP24.45■■□□□ 1.51
COL6A2-208ENST00000485591 AKAP11Q9UKA4 1901 aa24.45■■□□□ 1.51
COL6A2-208ENST00000485591 SCN4AP35499 1836 aa24.45■■□□□ 1.5
COL6A2-208ENST00000485591 FAM205AQ6ZU69 1335 aa24.45■■□□□ 1.5
COL6A2-208ENST00000485591 PSMD14O00487 310 aa24.45■■□□□ 1.5
COL6A2-208ENST00000485591 STRIP1Q5VSL9 837 aa24.45■■□□□ 1.5
COL6A2-208ENST00000485591 KDM2BQ8NHM5 1336 aa24.44■■□□□ 1.5
COL6A2-208ENST00000485591 SEMA3EO15041 775 aa24.44■■□□□ 1.5
COL6A2-208ENST00000485591 IFIT2P09913 472 aaKnown RBP24.44■■□□□ 1.5
COL6A2-208ENST00000485591 IQSEC3Q9UPP2 1182 aaPredicted RBP24.44■■□□□ 1.5
COL6A2-208ENST00000485591 DDNO94850 711 aaPredicted RBP24.43■■□□□ 1.5
COL6A2-208ENST00000485591 VIL1P09327 827 aaKnown RBP24.43■■□□□ 1.5
COL6A2-208ENST00000485591 YY1P25490 414 aa24.43■■□□□ 1.5
COL6A2-208ENST00000485591 ARID4AP29374 1257 aaPredicted RBP24.43■■□□□ 1.5
COL6A2-208ENST00000485591 GTF2IP78347 998 aa24.43■■□□□ 1.5
COL6A2-208ENST00000485591 CCDC158Q5M9N0 1113 aa24.43■■□□□ 1.5
COL6A2-208ENST00000485591 DACT2Q5SW24 774 aa24.43■■□□□ 1.5
COL6A2-208ENST00000485591 TTLL5Q6EMB2 1281 aa24.43■■□□□ 1.5
COL6A2-208ENST00000485591 GJA3Q9Y6H8 435 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms