RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 EPHA10Q5JZY3 1008 aa13.37□□□□□ -0.27
DDX56-212ENST00000485367 RBM26Q5T8P6 1007 aaKnown RBP13.37□□□□□ -0.27
DDX56-212ENST00000485367 LMBR1LQ6UX01 489 aa13.37□□□□□ -0.27
DDX56-212ENST00000485367 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.37□□□□□ -0.27
DDX56-212ENST00000485367 ABT1Q9ULW3 272 aaKnown RBP13.37□□□□□ -0.27
DDX56-212ENST00000485367 TRPM7Q96QT4 1865 aa13.36□□□□□ -0.27
DDX56-212ENST00000485367 MED23Q9ULK4 1368 aa13.36□□□□□ -0.27
DDX56-212ENST00000485367 KCNJ4P48050 445 aa13.36□□□□□ -0.27
DDX56-212ENST00000485367 ZC3H15Q8WU90 426 aaKnown RBP13.36□□□□□ -0.27
DDX56-212ENST00000485367 GLIS2Q9BZE0 524 aaPredicted RBP13.36□□□□□ -0.27
DDX56-212ENST00000485367 PGAP2Q9UHJ9 254 aa13.36□□□□□ -0.27
DDX56-212ENST00000485367 LEMD3Q9Y2U8 911 aa13.36□□□□□ -0.27
DDX56-212ENST00000485367 ZNF804BA4D1E1 1349 aa13.35□□□□□ -0.27
DDX56-212ENST00000485367 PTPRCP08575 1304 aa13.35□□□□□ -0.27
DDX56-212ENST00000485367 NFKBIBQ15653 356 aa13.35□□□□□ -0.27
DDX56-212ENST00000485367 TAF7LQ5H9L4 462 aa13.35□□□□□ -0.27
DDX56-212ENST00000485367 RSBN1LQ6PCB5 846 aaPredicted RBP13.35□□□□□ -0.27
DDX56-212ENST00000485367 CENPQQ7L2Z9 268 aaPredicted RBP13.35□□□□□ -0.27
DDX56-212ENST00000485367 PODNQ7Z5L7 613 aa13.35□□□□□ -0.27
DDX56-212ENST00000485367 TRMT2AQ8IZ69 625 aaKnown RBP13.35□□□□□ -0.27
DDX56-212ENST00000485367 USP17L3A6NCW0 530 aa13.35□□□□□ -0.27
DDX56-212ENST00000485367 USP17L4A6NCW7 530 aa13.35□□□□□ -0.27
DDX56-212ENST00000485367 EGFRP00533 1210 aa13.35□□□□□ -0.27
DDX56-212ENST00000485367 VEGFBP49765 207 aa13.35□□□□□ -0.27
DDX56-212ENST00000485367 CHRNDQ07001 517 aa13.35□□□□□ -0.27
DDX56-212ENST00000485367 CCDC57Q2TAC2 916 aa13.35□□□□□ -0.27
DDX56-212ENST00000485367 USP17L1Q7RTZ2 530 aa13.35□□□□□ -0.27
DDX56-212ENST00000485367 SMC4Q9NTJ3 1288 aa13.35□□□□□ -0.27
DDX56-212ENST00000485367 PSME4Q14997 1843 aa13.34□□□□□ -0.27
DDX56-212ENST00000485367 POLR2AP24928 1970 aaKnown RBP13.34□□□□□ -0.27
DDX56-212ENST00000485367 NBPF7P0C2Y1 421 aaPredicted RBP13.34□□□□□ -0.27
DDX56-212ENST00000485367 DEFB115Q30KQ5 88 aa13.34□□□□□ -0.27
DDX56-212ENST00000485367 ALDH1L2Q3SY69 923 aa13.34□□□□□ -0.27
DDX56-212ENST00000485367 GLIPR1L2Q4G1C9 344 aa13.34□□□□□ -0.27
DDX56-212ENST00000485367 CST9Q5W186 159 aa13.34□□□□□ -0.27
DDX56-212ENST00000485367 CDC37L1Q7L3B6 337 aa13.34□□□□□ -0.27
DDX56-212ENST00000485367 USP48Q86UV5 1035 aa13.34□□□□□ -0.27
DDX56-212ENST00000485367 TXNRD3Q86VQ6 643 aa13.34□□□□□ -0.27
DDX56-212ENST00000485367 HELBQ8NG08 1087 aaPredicted RBP13.34□□□□□ -0.27
DDX56-212ENST00000485367 FBXW7Q969H0 707 aa13.34□□□□□ -0.27
DDX56-212ENST00000485367 ZNF594Q96JF6 807 aaPredicted RBP13.34□□□□□ -0.27
DDX56-212ENST00000485367 PCNTO95613 3336 aa13.34□□□□□ -0.27
DDX56-212ENST00000485367 RASSF10A6NK89 507 aa13.33□□□□□ -0.28
DDX56-212ENST00000485367 TAF5LO75529 589 aa13.33□□□□□ -0.28
DDX56-212ENST00000485367 HSPA1AP0DMV8 641 aaKnown RBP13.33□□□□□ -0.28
DDX56-212ENST00000485367 HSPA1BP0DMV9 641 aaKnown RBP13.33□□□□□ -0.28
DDX56-212ENST00000485367 KLRK1P26718 216 aa13.33□□□□□ -0.28
DDX56-212ENST00000485367 AGBL3Q8NEM8 1001 aa13.33□□□□□ -0.28
DDX56-212ENST00000485367 SUCLG2Q96I99 432 aa13.33□□□□□ -0.28
DDX56-212ENST00000485367 COA1Q9GZY4 146 aa13.33□□□□□ -0.28
DDX56-212ENST00000485367 ZNF408Q9H9D4 720 aa13.33□□□□□ -0.28
DDX56-212ENST00000485367 CELF2O95319 508 aaKnown RBP13.32□□□□□ -0.28
DDX56-212ENST00000485367 KIF4BQ2VIQ3 1234 aa13.32□□□□□ -0.28
DDX56-212ENST00000485367 LDHAL6AQ6ZMR3 332 aa13.32□□□□□ -0.28
DDX56-212ENST00000485367 PAXIP1Q6ZW49 1069 aaPredicted RBP13.32□□□□□ -0.28
DDX56-212ENST00000485367 KAZALD1Q96I82 304 aa13.32□□□□□ -0.28
DDX56-212ENST00000485367 CNNM1Q9NRU3 951 aa13.32□□□□□ -0.28
DDX56-212ENST00000485367 SNAP23O00161 211 aa13.32□□□□□ -0.28
DDX56-212ENST00000485367 PLIN1O60240 522 aa13.32□□□□□ -0.28
DDX56-212ENST00000485367 USP17L8P0C7I0 530 aa13.32□□□□□ -0.28
DDX56-212ENST00000485367 ZNF280AP59817 542 aaPredicted RBP13.32□□□□□ -0.28
DDX56-212ENST00000485367 DCPSQ96C86 337 aaKnown RBP13.32□□□□□ -0.28
DDX56-212ENST00000485367 GMLQ99445 158 aa13.32□□□□□ -0.28
DDX56-212ENST00000485367 MXD3Q9BW11 206 aa13.32□□□□□ -0.28
DDX56-212ENST00000485367 RTN4Q9NQC3 1192 aaKnown RBP13.32□□□□□ -0.28
DDX56-212ENST00000485367 UTYO14607 1347 aa13.31□□□□□ -0.28
DDX56-212ENST00000485367 GRM1Q13255 1194 aa13.31□□□□□ -0.28
DDX56-212ENST00000485367 DACT2Q5SW24 774 aa13.31□□□□□ -0.28
DDX56-212ENST00000485367 DLK2Q6UY11 383 aa13.31□□□□□ -0.28
DDX56-212ENST00000485367 KRT26Q7Z3Y9 468 aa13.31□□□□□ -0.28
DDX56-212ENST00000485367 A0A1B0GUL6 1792 aa13.31□□□□□ -0.28
DDX56-212ENST00000485367 ZNF609O15014 1411 aa13.3□□□□□ -0.28
DDX56-212ENST00000485367 CT47B1P0C2W7 299 aaPredicted RBP13.3□□□□□ -0.28
DDX56-212ENST00000485367 STRIP1Q5VSL9 837 aa13.3□□□□□ -0.28
DDX56-212ENST00000485367 CRBNQ96SW2 442 aa13.3□□□□□ -0.28
DDX56-212ENST00000485367 BICC1Q9H694 974 aaKnown RBP13.3□□□□□ -0.28
DDX56-212ENST00000485367 ASTN2O75129 1339 aaPredicted RBP13.3□□□□□ -0.28
DDX56-212ENST00000485367 WDR33Q9C0J8 1336 aaKnown RBP13.3□□□□□ -0.28
DDX56-212ENST00000485367 ADM5C9JUS6 153 aa13.3□□□□□ -0.28
DDX56-212ENST00000485367 SCARF1Q14162 830 aa13.3□□□□□ -0.28
DDX56-212ENST00000485367 TTLL5Q6EMB2 1281 aa13.3□□□□□ -0.28
DDX56-212ENST00000485367 FAM43AQ8N2R8 423 aa13.3□□□□□ -0.28
DDX56-212ENST00000485367 MYOZ2Q9NPC6 264 aa13.3□□□□□ -0.28
DDX56-212ENST00000485367 GGA3Q9NZ52 723 aa13.3□□□□□ -0.28
DDX56-212ENST00000485367 TLL2Q9Y6L7 1015 aa13.3□□□□□ -0.28
DDX56-212ENST00000485367 GTF2IP78347 998 aa13.29□□□□□ -0.28
DDX56-212ENST00000485367 CYP4F22Q6NT55 531 aa13.29□□□□□ -0.28
DDX56-212ENST00000485367 SULF1Q8IWU6 871 aa13.29□□□□□ -0.28
DDX56-212ENST00000485367 ANKRD44Q8N8A2 993 aa13.29□□□□□ -0.28
DDX56-212ENST00000485367 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.29□□□□□ -0.28
DDX56-212ENST00000485367 CAPNS2Q96L46 248 aa13.29□□□□□ -0.28
DDX56-212ENST00000485367 PUS3Q9BZE2 481 aaKnown RBP13.29□□□□□ -0.28
DDX56-212ENST00000485367 USP44Q9H0E7 712 aa13.29□□□□□ -0.28
DDX56-212ENST00000485367 CD209Q9NNX6 404 aa13.29□□□□□ -0.28
DDX56-212ENST00000485367 NOB1Q9ULX3 412 aaKnown RBP13.29□□□□□ -0.28
DDX56-212ENST00000485367 ZNF646O15015 1829 aaPredicted RBP13.28□□□□□ -0.28
DDX56-212ENST00000485367 ECE1P42892 770 aa13.28□□□□□ -0.28
DDX56-212ENST00000485367 RABL6Q3YEC7 729 aaPredicted RBP13.28□□□□□ -0.28
DDX56-212ENST00000485367 ANGEL2Q5VTE6 544 aaKnown RBP13.28□□□□□ -0.28
DDX56-212ENST00000485367 C15orf52Q6ZUT6 534 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms