RNA–Protein interactions for RNA: ENST00000485124.1

TMEM40-208, Transcript of transmembrane protein 40, humanhuman

TSL 5

Gene TMEM40, Length 927 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-208ENST00000485124 USP17L1Q7RTZ2 530 aa12.63□□□□□ -0.39
TMEM40-208ENST00000485124 REM2Q8IYK8 340 aaPredicted RBP12.63□□□□□ -0.39
TMEM40-208ENST00000485124 TSR2Q969E8 191 aaKnown RBP12.63□□□□□ -0.39
TMEM40-208ENST00000485124 GGA3Q9NZ52 723 aa12.63□□□□□ -0.39
TMEM40-208ENST00000485124 MINPP1Q9UNW1 487 aa12.63□□□□□ -0.39
TMEM40-208ENST00000485124 FAM155AB1AL88 458 aaPredicted RBP12.62□□□□□ -0.39
TMEM40-208ENST00000485124 SLC4A2P04920 1241 aa12.62□□□□□ -0.39
TMEM40-208ENST00000485124 CCT4P50991 539 aaKnown RBP12.62□□□□□ -0.39
TMEM40-208ENST00000485124 RBM26Q5T8P6 1007 aaKnown RBP12.62□□□□□ -0.39
TMEM40-208ENST00000485124 ERICH6BQ5W0A0 696 aa12.62□□□□□ -0.39
TMEM40-208ENST00000485124 COA1Q9GZY4 146 aa12.62□□□□□ -0.39
TMEM40-208ENST00000485124 MYH16Q9H6N6 1097 aa12.62□□□□□ -0.39
TMEM40-208ENST00000485124 GREM2Q9H772 168 aa12.62□□□□□ -0.39
TMEM40-208ENST00000485124 LEMD3Q9Y2U8 911 aa12.62□□□□□ -0.39
TMEM40-208ENST00000485124 ADM5C9JUS6 153 aa12.61□□□□□ -0.39
TMEM40-208ENST00000485124 IGHMBP2P38935 993 aaKnown RBP12.61□□□□□ -0.39
TMEM40-208ENST00000485124 FLIIQ13045 1269 aa12.61□□□□□ -0.39
TMEM40-208ENST00000485124 GCKRQ14397 625 aa12.61□□□□□ -0.39
TMEM40-208ENST00000485124 CWF19L2Q2TBE0 894 aaKnown RBP12.61□□□□□ -0.39
TMEM40-208ENST00000485124 STRIP1Q5VSL9 837 aa12.61□□□□□ -0.39
TMEM40-208ENST00000485124 WDR63Q8IWG1 891 aa12.61□□□□□ -0.39
TMEM40-208ENST00000485124 LINS1Q8NG48 757 aa12.61□□□□□ -0.39
TMEM40-208ENST00000485124 JARID2Q92833 1246 aaPredicted RBP12.61□□□□□ -0.39
TMEM40-208ENST00000485124 CCDC85AQ96PX6 553 aaPredicted RBP12.61□□□□□ -0.39
TMEM40-208ENST00000485124 ANKRD2Q9GZV1 360 aa12.61□□□□□ -0.39
TMEM40-208ENST00000485124 MYOZ2Q9NPC6 264 aa12.61□□□□□ -0.39
TMEM40-208ENST00000485124 CSF1RP07333 972 aa12.6□□□□□ -0.39
TMEM40-208ENST00000485124 SLC10A3P09131 477 aa12.6□□□□□ -0.39
TMEM40-208ENST00000485124 CASP7P55210 303 aa12.6□□□□□ -0.39
TMEM40-208ENST00000485124 SCARF1Q14162 830 aa12.6□□□□□ -0.39
TMEM40-208ENST00000485124 DACT2Q5SW24 774 aa12.6□□□□□ -0.39
TMEM40-208ENST00000485124 ANGEL2Q5VTE6 544 aaKnown RBP12.6□□□□□ -0.39
TMEM40-208ENST00000485124 UBE3BQ7Z3V4 1068 aa12.6□□□□□ -0.39
TMEM40-208ENST00000485124 DNAAF4Q8WXU2 420 aa12.6□□□□□ -0.39
TMEM40-208ENST00000485124 CDCA5Q96FF9 252 aa12.6□□□□□ -0.39
TMEM40-208ENST00000485124 A0A1B0GUL6 1792 aa12.6□□□□□ -0.39
TMEM40-208ENST00000485124 FANCIQ9NVI1 1328 aa12.6□□□□□ -0.39
TMEM40-208ENST00000485124 RGS19P49795 217 aa12.59□□□□□ -0.39
TMEM40-208ENST00000485124 ZNF157P51786 506 aaPredicted RBP12.59□□□□□ -0.39
TMEM40-208ENST00000485124 FKBP5Q13451 457 aaPredicted RBP12.59□□□□□ -0.39
TMEM40-208ENST00000485124 G2E3Q7L622 706 aa12.59□□□□□ -0.39
TMEM40-208ENST00000485124 OGFOD1Q8N543 542 aa12.59□□□□□ -0.39
TMEM40-208ENST00000485124 TSHZ2Q9NRE2 1034 aa12.59□□□□□ -0.39
TMEM40-208ENST00000485124 ECM29Q5VYK3 1845 aa12.58□□□□□ -0.4
TMEM40-208ENST00000485124 ITGA6P23229 1130 aa12.58□□□□□ -0.4
TMEM40-208ENST00000485124 DLK2Q6UY11 383 aa12.58□□□□□ -0.4
TMEM40-208ENST00000485124 ZIC5Q96T25 663 aa12.58□□□□□ -0.4
TMEM40-208ENST00000485124 MPHOSPH8Q99549 860 aa12.58□□□□□ -0.4
TMEM40-208ENST00000485124 TSKSQ9UJT2 592 aa12.58□□□□□ -0.4
TMEM40-208ENST00000485124 ZNF804BA4D1E1 1349 aa12.58□□□□□ -0.4
TMEM40-208ENST00000485124 ASTN2O75129 1339 aaPredicted RBP12.58□□□□□ -0.4
TMEM40-208ENST00000485124 VAMP4O75379 141 aa12.57□□□□□ -0.4
TMEM40-208ENST00000485124 IRX6P78412 446 aaPredicted RBP12.57□□□□□ -0.4
TMEM40-208ENST00000485124 KIF23Q02241 960 aaPredicted RBP12.57□□□□□ -0.4
TMEM40-208ENST00000485124 C15orf52Q6ZUT6 534 aaKnown RBP12.57□□□□□ -0.4
TMEM40-208ENST00000485124 MCOLN1Q9GZU1 580 aa12.57□□□□□ -0.4
TMEM40-208ENST00000485124 COL1A1P02452 1464 aaPredicted RBP12.57□□□□□ -0.4
TMEM40-208ENST00000485124 WNT10BO00744 389 aa12.56□□□□□ -0.4
TMEM40-208ENST00000485124 FAM161AQ3B820 660 aa12.56□□□□□ -0.4
TMEM40-208ENST00000485124 HDAC9Q9UKV0 1011 aa12.56□□□□□ -0.4
TMEM40-208ENST00000485124 ANKRD18BA2A2Z9 1011 aa12.55□□□□□ -0.4
TMEM40-208ENST00000485124 NBPF9Q3BBW0 867 aa12.55□□□□□ -0.4
TMEM40-208ENST00000485124 TTLL5Q6EMB2 1281 aa12.55□□□□□ -0.4
TMEM40-208ENST00000485124 TXNRD3Q86VQ6 643 aa12.55□□□□□ -0.4
TMEM40-208ENST00000485124 RASAL3Q86YV0 1011 aa12.55□□□□□ -0.4
TMEM40-208ENST00000485124 CSRNP1Q96S65 589 aa12.55□□□□□ -0.4
TMEM40-208ENST00000485124 RNF186Q9NXI6 227 aa12.55□□□□□ -0.4
TMEM40-208ENST00000485124 LAMB1P07942 1786 aa12.55□□□□□ -0.4
TMEM40-208ENST00000485124 WTIPA6NIX2 430 aaPredicted RBP12.54□□□□□ -0.4
TMEM40-208ENST00000485124 CCDC85CA6NKD9 419 aa12.54□□□□□ -0.4
TMEM40-208ENST00000485124 NF2P35240 595 aa12.54□□□□□ -0.4
TMEM40-208ENST00000485124 FKBP1AP62942 108 aaKnown RBP12.54□□□□□ -0.4
TMEM40-208ENST00000485124 EXOSC9Q06265 439 aaKnown RBP12.54□□□□□ -0.4
TMEM40-208ENST00000485124 CHRNDQ07001 517 aa12.54□□□□□ -0.4
TMEM40-208ENST00000485124 IFIT5Q13325 482 aaKnown RBP12.54□□□□□ -0.4
TMEM40-208ENST00000485124 DGKZQ13574 1117 aa12.54□□□□□ -0.4
TMEM40-208ENST00000485124 BEND3Q5T5X7 828 aa12.54□□□□□ -0.4
TMEM40-208ENST00000485124 APOBEC3FQ8IUX4 373 aaKnown RBP12.54□□□□□ -0.4
TMEM40-208ENST00000485124 MTMR14Q8NCE2 650 aa12.54□□□□□ -0.4
TMEM40-208ENST00000485124 ZBED3Q96IU2 234 aaPredicted RBP12.54□□□□□ -0.4
TMEM40-208ENST00000485124 IRS2Q9Y4H2 1338 aa12.54□□□□□ -0.4
TMEM40-208ENST00000485124 KCNJ4P48050 445 aa12.53□□□□□ -0.4
TMEM40-208ENST00000485124 FOXO4P98177 505 aa12.53□□□□□ -0.4
TMEM40-208ENST00000485124 MLLT1Q03111 559 aaPredicted RBP12.53□□□□□ -0.4
TMEM40-208ENST00000485124 NOM1Q5C9Z4 860 aaKnown RBP12.53□□□□□ -0.4
TMEM40-208ENST00000485124 CD209Q9NNX6 404 aa12.53□□□□□ -0.4
TMEM40-208ENST00000485124 PPP4R2Q9NY27 417 aa12.53□□□□□ -0.4
TMEM40-208ENST00000485124 UNCXA6NJT0 531 aa12.52□□□□□ -0.41
TMEM40-208ENST00000485124 GRM8O00222 908 aa12.52□□□□□ -0.41
TMEM40-208ENST00000485124 TRPA1O75762 1119 aa12.52□□□□□ -0.41
TMEM40-208ENST00000485124 ALDH1L1O75891 902 aa12.52□□□□□ -0.41
TMEM40-208ENST00000485124 IL1R1P14778 569 aa12.52□□□□□ -0.41
TMEM40-208ENST00000485124 PPP2R3BQ9Y5P8 575 aa12.52□□□□□ -0.41
TMEM40-208ENST00000485124 TNRC18O15417 2968 aaPredicted RBP12.51□□□□□ -0.41
TMEM40-208ENST00000485124 KLRK1P26718 216 aa12.51□□□□□ -0.41
TMEM40-208ENST00000485124 TM4SF4P48230 202 aa12.51□□□□□ -0.41
TMEM40-208ENST00000485124 GTF2IP78347 998 aa12.51□□□□□ -0.41
TMEM40-208ENST00000485124 ZNF804AQ7Z570 1209 aa12.51□□□□□ -0.41
TMEM40-208ENST00000485124 FBXW7Q969H0 707 aa12.51□□□□□ -0.41
TMEM40-208ENST00000485124 MXD3Q9BW11 206 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms