RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 STK24Q9Y6E0 443 aa10.86□□□□□ -0.67
USP16-206ENST00000485067 SHANK3Q9BYB0 1731 aa10.86□□□□□ -0.67
USP16-206ENST00000485067 ERBB4Q15303 1308 aa10.86□□□□□ -0.67
USP16-206ENST00000485067 NBPF26B4DH59 902 aa10.86□□□□□ -0.67
USP16-206ENST00000485067 CTAGE5O15320 804 aa10.86□□□□□ -0.67
USP16-206ENST00000485067 SASH1O94885 1247 aa10.86□□□□□ -0.67
USP16-206ENST00000485067 ZSCAN23Q3MJ62 389 aa10.86□□□□□ -0.67
USP16-206ENST00000485067 NBPF14Q5TI25 921 aa10.86□□□□□ -0.67
USP16-206ENST00000485067 NBPF15Q8N660 670 aa10.86□□□□□ -0.67
USP16-206ENST00000485067 SNRKQ9NRH2 765 aa10.86□□□□□ -0.67
USP16-206ENST00000485067 LIMCH1Q9UPQ0 1083 aa10.86□□□□□ -0.67
USP16-206ENST00000485067 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.86□□□□□ -0.67
USP16-206ENST00000485067 DYNC1I1O14576 645 aa10.85□□□□□ -0.67
USP16-206ENST00000485067 GTF2A1P52655 376 aaPredicted RBP10.85□□□□□ -0.67
USP16-206ENST00000485067 CCT2P78371 535 aaKnown RBP10.85□□□□□ -0.67
USP16-206ENST00000485067 LONRF3Q496Y0 759 aa10.85□□□□□ -0.67
USP16-206ENST00000485067 CTR9Q6PD62 1173 aa10.85□□□□□ -0.67
USP16-206ENST00000485067 MNS1Q8NEH6 495 aa10.85□□□□□ -0.67
USP16-206ENST00000485067 SIL1Q9H173 461 aa10.85□□□□□ -0.67
USP16-206ENST00000485067 CCDC173Q0VFZ6 552 aa10.84□□□□□ -0.67
USP16-206ENST00000485067 CAVIN1Q6NZI2 390 aaKnown RBP10.84□□□□□ -0.67
USP16-206ENST00000485067 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.84□□□□□ -0.67
USP16-206ENST00000485067 HELBQ8NG08 1087 aaPredicted RBP10.84□□□□□ -0.67
USP16-206ENST00000485067 ZSCAN31Q96LW9 406 aaPredicted RBP10.84□□□□□ -0.67
USP16-206ENST00000485067 SUDS3Q9H7L9 328 aaPredicted RBP10.84□□□□□ -0.67
USP16-206ENST00000485067 COPRSQ9NQ92 184 aa10.84□□□□□ -0.67
USP16-206ENST00000485067 CEP126Q9P2H0 1117 aa10.84□□□□□ -0.67
USP16-206ENST00000485067 KIF3AQ9Y496 699 aa10.84□□□□□ -0.67
USP16-206ENST00000485067 TRIM66O15016 1216 aa10.84□□□□□ -0.67
USP16-206ENST00000485067 A1BGP04217 495 aa10.84□□□□□ -0.67
USP16-206ENST00000485067 ZKSCAN1P17029 563 aaPredicted RBP10.84□□□□□ -0.67
USP16-206ENST00000485067 NASPP49321 788 aaPredicted RBP10.84□□□□□ -0.67
USP16-206ENST00000485067 VPS53Q5VIR6 699 aa10.84□□□□□ -0.67
USP16-206ENST00000485067 EAF2Q96CJ1 260 aaPredicted RBP10.84□□□□□ -0.67
USP16-206ENST00000485067 TLR7Q9NYK1 1049 aaKnown RBP10.84□□□□□ -0.67
USP16-206ENST00000485067 KIF3CO14782 793 aa10.83□□□□□ -0.68
USP16-206ENST00000485067 PAX7P23759 505 aa10.83□□□□□ -0.68
USP16-206ENST00000485067 TTLL7Q6ZT98 887 aa10.83□□□□□ -0.68
USP16-206ENST00000485067 GPT2Q8TD30 523 aa10.83□□□□□ -0.68
USP16-206ENST00000485067 BRMS1Q9HCU9 246 aa10.83□□□□□ -0.68
USP16-206ENST00000485067 SH2B1Q9NRF2 756 aaPredicted RBP10.83□□□□□ -0.68
USP16-206ENST00000485067 UBR2Q8IWV8 1755 aa10.83□□□□□ -0.68
USP16-206ENST00000485067 CCDC171Q6TFL3 1326 aa10.83□□□□□ -0.68
USP16-206ENST00000485067 TOGARAM1Q9Y4F4 1720 aa10.83□□□□□ -0.68
USP16-206ENST00000485067 ZRANB2O95218 330 aaKnown RBP eCLIP10.83□□□□□ -0.68
USP16-206ENST00000485067 IPO7O95373 1038 aaKnown RBP10.83□□□□□ -0.68
USP16-206ENST00000485067 IL2RBP14784 551 aa10.83□□□□□ -0.68
USP16-206ENST00000485067 AK2P54819 239 aa10.83□□□□□ -0.68
USP16-206ENST00000485067 EVA1CP58658 441 aa10.83□□□□□ -0.68
USP16-206ENST00000485067 RABL6Q3YEC7 729 aaPredicted RBP10.83□□□□□ -0.68
USP16-206ENST00000485067 RASEFQ8IZ41 740 aa10.83□□□□□ -0.68
USP16-206ENST00000485067 PLBD2Q8NHP8 589 aa10.83□□□□□ -0.68
USP16-206ENST00000485067 SYAP1Q96A49 352 aaPredicted RBP10.83□□□□□ -0.68
USP16-206ENST00000485067 PPP1R9BQ96SB3 815 aa10.83□□□□□ -0.68
USP16-206ENST00000485067 ZSWIM6Q9HCJ5 1215 aa10.83□□□□□ -0.68
USP16-206ENST00000485067 CYP46A1Q9Y6A2 500 aa10.83□□□□□ -0.68
USP16-206ENST00000485067 RFX7Q2KHR2 1363 aa10.82□□□□□ -0.68
USP16-206ENST00000485067 PCDH11XQ9BZA7 1347 aa10.82□□□□□ -0.68
USP16-206ENST00000485067 PCDH11YQ9BZA8 1340 aa10.82□□□□□ -0.68
USP16-206ENST00000485067 PPP1R12AO14974 1030 aaPredicted RBP10.82□□□□□ -0.68
USP16-206ENST00000485067 PPFIA4O75335 1185 aa10.82□□□□□ -0.68
USP16-206ENST00000485067 CASTP20810 708 aaKnown RBP10.82□□□□□ -0.68
USP16-206ENST00000485067 NECTIN1Q15223 517 aa10.82□□□□□ -0.68
USP16-206ENST00000485067 MED4Q9NPJ6 270 aa10.82□□□□□ -0.68
USP16-206ENST00000485067 BTG4Q9NY30 223 aa10.82□□□□□ -0.68
USP16-206ENST00000485067 NHSL1Q5SYE7 1610 aa10.82□□□□□ -0.68
USP16-206ENST00000485067 KAT6BQ8WYB5 2073 aa10.82□□□□□ -0.68
USP16-206ENST00000485067 ERVV-2B6SEH9 535 aa10.82□□□□□ -0.68
USP16-206ENST00000485067 OFD1O75665 1012 aa10.82□□□□□ -0.68
USP16-206ENST00000485067 PSMA5P28066 241 aa10.82□□□□□ -0.68
USP16-206ENST00000485067 RNF20Q5VTR2 975 aa10.82□□□□□ -0.68
USP16-206ENST00000485067 UBE3BQ7Z3V4 1068 aa10.82□□□□□ -0.68
USP16-206ENST00000485067 MAP4K1Q92918 833 aa10.82□□□□□ -0.68
USP16-206ENST00000485067 POM121Q96HA1 1249 aa10.82□□□□□ -0.68
USP16-206ENST00000485067 CCDC8Q9H0W5 538 aaPredicted RBP10.82□□□□□ -0.68
USP16-206ENST00000485067 ATP6V1DQ9Y5K8 247 aa10.82□□□□□ -0.68
USP16-206ENST00000485067 KCPQ6ZWJ8 1503 aa10.81□□□□□ -0.68
USP16-206ENST00000485067 PAPPAQ13219 1627 aa10.81□□□□□ -0.68
USP16-206ENST00000485067 CCDC189A1A4V9 331 aa10.81□□□□□ -0.68
USP16-206ENST00000485067 PTH1RQ03431 593 aa10.81□□□□□ -0.68
USP16-206ENST00000485067 LRCH2Q5VUJ6 765 aa10.81□□□□□ -0.68
USP16-206ENST00000485067 PRPF40BQ6NWY9 871 aaKnown RBP10.81□□□□□ -0.68
USP16-206ENST00000485067 RUFY3Q7L099 469 aa10.81□□□□□ -0.68
USP16-206ENST00000485067 TMEM87AQ8NBN3 555 aa10.81□□□□□ -0.68
USP16-206ENST00000485067 PDRG1Q9NUG6 133 aa10.81□□□□□ -0.68
USP16-206ENST00000485067 NUP188Q5SRE5 1749 aa10.81□□□□□ -0.68
USP16-206ENST00000485067 KIF4AO95239 1232 aa10.81□□□□□ -0.68
USP16-206ENST00000485067 LIG1P18858 919 aa10.81□□□□□ -0.68
USP16-206ENST00000485067 ATP5JP18859 108 aa10.81□□□□□ -0.68
USP16-206ENST00000485067 RFX5P48382 616 aaPredicted RBP10.81□□□□□ -0.68
USP16-206ENST00000485067 BIRC2Q13490 618 aa10.81□□□□□ -0.68
USP16-206ENST00000485067 SF3A1Q15459 793 aaKnown RBP10.81□□□□□ -0.68
USP16-206ENST00000485067 LRSAM1Q6UWE0 723 aa10.81□□□□□ -0.68
USP16-206ENST00000485067 ACRBPQ8NEB7 543 aa10.81□□□□□ -0.68
USP16-206ENST00000485067 FBXW7Q969H0 707 aa10.81□□□□□ -0.68
USP16-206ENST00000485067 JAKMIP1Q96N16 626 aaKnown RBP10.81□□□□□ -0.68
USP16-206ENST00000485067 FSD1Q9BTV5 496 aa10.81□□□□□ -0.68
USP16-206ENST00000485067 ALDH8A1Q9H2A2 487 aaPredicted RBP10.81□□□□□ -0.68
USP16-206ENST00000485067 HMG20BQ9P0W2 317 aa10.81□□□□□ -0.68
USP16-206ENST00000485067 CD151P48509 253 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms