RNA–Protein interactions for RNA: ENST00000485065.1

TRUB1-202, Transcript of TruB pseudouridine synthase family member 1, humanhuman

TSL 2

Gene TRUB1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-202ENST00000485065 SREBF2Q12772 1141 aa12.91□□□□□ -0.34
TRUB1-202ENST00000485065 TAF7Q15545 349 aaPredicted RBP12.91□□□□□ -0.34
TRUB1-202ENST00000485065 RBM26Q5T8P6 1007 aaKnown RBP12.91□□□□□ -0.34
TRUB1-202ENST00000485065 DDX46Q7L014 1031 aaKnown RBP12.91□□□□□ -0.34
TRUB1-202ENST00000485065 NGEFQ8N5V2 710 aa12.91□□□□□ -0.34
TRUB1-202ENST00000485065 MIS18AQ9NYP9 233 aa12.91□□□□□ -0.34
TRUB1-202ENST00000485065 LAMB4A4D0S4 1761 aa12.91□□□□□ -0.34
TRUB1-202ENST00000485065 PITPNM2Q9BZ72 1349 aa12.9□□□□□ -0.34
TRUB1-202ENST00000485065 THUMPD2Q9BTF0 503 aaKnown RBP12.9□□□□□ -0.34
TRUB1-202ENST00000485065 ZBTB3Q9H5J0 574 aa12.9□□□□□ -0.34
TRUB1-202ENST00000485065 CIZ1Q9ULV3 898 aaPredicted RBP12.9□□□□□ -0.34
TRUB1-202ENST00000485065 DUOX1Q9NRD9 1551 aa12.9□□□□□ -0.35
TRUB1-202ENST00000485065 ZNF609O15014 1411 aa12.89□□□□□ -0.35
TRUB1-202ENST00000485065 ALDH1A1P00352 501 aa12.89□□□□□ -0.35
TRUB1-202ENST00000485065 HOXB1P14653 301 aaPredicted RBP12.89□□□□□ -0.35
TRUB1-202ENST00000485065 ZNF280AP59817 542 aaPredicted RBP12.89□□□□□ -0.35
TRUB1-202ENST00000485065 NFE2L2Q16236 605 aa12.89□□□□□ -0.35
TRUB1-202ENST00000485065 DBNDD1Q9H9R9 158 aa12.89□□□□□ -0.35
TRUB1-202ENST00000485065 RRP7AQ9Y3A4 280 aaKnown RBP12.89□□□□□ -0.35
TRUB1-202ENST00000485065 CEP290O15078 2479 aa12.89□□□□□ -0.35
TRUB1-202ENST00000485065 HTTP42858 3142 aa12.89□□□□□ -0.35
TRUB1-202ENST00000485065 ERBB4Q15303 1308 aa12.88□□□□□ -0.35
TRUB1-202ENST00000485065 ARMC5Q96C12 935 aa12.88□□□□□ -0.35
TRUB1-202ENST00000485065 RTL9Q8NET4 1388 aa12.88□□□□□ -0.35
TRUB1-202ENST00000485065 LRRC37AA6NMS7 1700 aa12.88□□□□□ -0.35
TRUB1-202ENST00000485065 MYBBP1AQ9BQG0 1328 aaKnown RBP12.88□□□□□ -0.35
TRUB1-202ENST00000485065 SZT2Q5T011 3432 aa12.87□□□□□ -0.35
TRUB1-202ENST00000485065 KDM3BQ7LBC6 1761 aa12.87□□□□□ -0.35
TRUB1-202ENST00000485065 ECE2O60344 883 aa12.87□□□□□ -0.35
TRUB1-202ENST00000485065 SCARF1Q14162 830 aa12.87□□□□□ -0.35
TRUB1-202ENST00000485065 ANGEL2Q5VTE6 544 aaKnown RBP12.87□□□□□ -0.35
TRUB1-202ENST00000485065 OTOP1Q7RTM1 612 aa12.87□□□□□ -0.35
TRUB1-202ENST00000485065 SLC17A8Q8NDX2 589 aa12.87□□□□□ -0.35
TRUB1-202ENST00000485065 AGBL3Q8NEM8 1001 aa12.87□□□□□ -0.35
TRUB1-202ENST00000485065 PNISRQ8TF01 805 aaKnown RBP12.87□□□□□ -0.35
TRUB1-202ENST00000485065 EYA3Q99504 573 aa12.87□□□□□ -0.35
TRUB1-202ENST00000485065 PRKRIP1Q9H875 184 aaPredicted RBP12.87□□□□□ -0.35
TRUB1-202ENST00000485065 TRIM17Q9Y577 477 aa12.87□□□□□ -0.35
TRUB1-202ENST00000485065 CUL9Q8IWT3 2517 aa12.87□□□□□ -0.35
TRUB1-202ENST00000485065 ASTN2O75129 1339 aaPredicted RBP12.87□□□□□ -0.35
TRUB1-202ENST00000485065 DDX60Q8IY21 1712 aaKnown RBP12.86□□□□□ -0.35
TRUB1-202ENST00000485065 UBE2Q2LH0YL09 131 aa12.86□□□□□ -0.35
TRUB1-202ENST00000485065 INHBEP58166 350 aa12.86□□□□□ -0.35
TRUB1-202ENST00000485065 R3HDMLQ9H3Y0 253 aa12.86□□□□□ -0.35
TRUB1-202ENST00000485065 KCNQ5Q9NR82 932 aa12.86□□□□□ -0.35
TRUB1-202ENST00000485065 LAMB2P55268 1798 aa12.86□□□□□ -0.35
TRUB1-202ENST00000485065 MYL6BP14649 208 aa12.85□□□□□ -0.35
TRUB1-202ENST00000485065 EN2P19622 333 aaPredicted RBP12.85□□□□□ -0.35
TRUB1-202ENST00000485065 HSP90AB3PQ58FF7 597 aa12.85□□□□□ -0.35
TRUB1-202ENST00000485065 POLLQ9UGP5 575 aa12.85□□□□□ -0.35
TRUB1-202ENST00000485065 NSFL1CQ9UNZ2 370 aaKnown RBP12.85□□□□□ -0.35
TRUB1-202ENST00000485065 ADAMTS8Q9UP79 889 aa12.85□□□□□ -0.35
TRUB1-202ENST00000485065 PTPN22Q9Y2R2 807 aa12.85□□□□□ -0.35
TRUB1-202ENST00000485065 CENPFP49454 3210 aa12.85□□□□□ -0.35
TRUB1-202ENST00000485065 A0A0C4DFX4 3053 aa12.84□□□□□ -0.35
TRUB1-202ENST00000485065 G3V3G9 751 aa12.84□□□□□ -0.35
TRUB1-202ENST00000485065 C6orf229H3BNL8 230 aa12.84□□□□□ -0.35
TRUB1-202ENST00000485065 RIMBP2O15034 1052 aa12.84□□□□□ -0.35
TRUB1-202ENST00000485065 HCLS1P14317 486 aaPredicted RBP12.84□□□□□ -0.35
TRUB1-202ENST00000485065 TMPOP42166 694 aaKnown RBP12.84□□□□□ -0.35
TRUB1-202ENST00000485065 EIF4A1P60842 406 aaKnown RBP12.84□□□□□ -0.35
TRUB1-202ENST00000485065 MOB2Q70IA6 237 aa12.84□□□□□ -0.35
TRUB1-202ENST00000485065 LRP10Q7Z4F1 713 aa12.84□□□□□ -0.35
TRUB1-202ENST00000485065 SH3TC1Q8TE82 1336 aa12.84□□□□□ -0.35
TRUB1-202ENST00000485065 SCN9AQ15858 1988 aa12.83□□□□□ -0.35
TRUB1-202ENST00000485065 BRCA2P51587 3418 aa12.83□□□□□ -0.36
TRUB1-202ENST00000485065 NF2P35240 595 aa12.83□□□□□ -0.36
TRUB1-202ENST00000485065 RIPK4P57078 832 aa12.83□□□□□ -0.36
TRUB1-202ENST00000485065 TCIRG1Q13488 830 aa12.83□□□□□ -0.36
TRUB1-202ENST00000485065 RSBN1LQ6PCB5 846 aaPredicted RBP12.83□□□□□ -0.36
TRUB1-202ENST00000485065 NLRP10Q86W26 655 aa12.83□□□□□ -0.36
TRUB1-202ENST00000485065 CCDC146Q8IYE0 955 aa12.83□□□□□ -0.36
TRUB1-202ENST00000485065 ERO1AQ96HE7 468 aa12.83□□□□□ -0.36
TRUB1-202ENST00000485065 GMLQ99445 158 aa12.83□□□□□ -0.36
TRUB1-202ENST00000485065 TAF1P21675 1872 aa12.82□□□□□ -0.36
TRUB1-202ENST00000485065 MANSC4A6NHS7 340 aaPredicted RBP12.82□□□□□ -0.36
TRUB1-202ENST00000485065 DOK7Q18PE1 504 aa12.82□□□□□ -0.36
TRUB1-202ENST00000485065 CCDC184Q52MB2 194 aa12.82□□□□□ -0.36
TRUB1-202ENST00000485065 SPRYD7Q5W111 196 aa12.82□□□□□ -0.36
TRUB1-202ENST00000485065 TBC1D16Q8TBP0 767 aa12.82□□□□□ -0.36
TRUB1-202ENST00000485065 ZC3H12CQ9C0D7 883 aaKnown RBP12.82□□□□□ -0.36
TRUB1-202ENST00000485065 PNNQ9H307 717 aaKnown RBP12.82□□□□□ -0.36
TRUB1-202ENST00000485065 MYOZ2Q9NPC6 264 aa12.82□□□□□ -0.36
TRUB1-202ENST00000485065 PODXL2Q9NZ53 605 aa12.82□□□□□ -0.36
TRUB1-202ENST00000485065 H0YGN5 161 aa12.81□□□□□ -0.36
TRUB1-202ENST00000485065 USP17L8P0C7I0 530 aa12.81□□□□□ -0.36
TRUB1-202ENST00000485065 GPSM2P81274 684 aa12.81□□□□□ -0.36
TRUB1-202ENST00000485065 TTLL12Q14166 644 aaPredicted RBP12.81□□□□□ -0.36
TRUB1-202ENST00000485065 SF3B3Q15393 1217 aaKnown RBP12.81□□□□□ -0.36
TRUB1-202ENST00000485065 LDLRAD1Q5T700 205 aa12.81□□□□□ -0.36
TRUB1-202ENST00000485065 ARMC9Q7Z3E5 817 aa12.81□□□□□ -0.36
TRUB1-202ENST00000485065 EFCAB3Q8N7B9 438 aa12.81□□□□□ -0.36
TRUB1-202ENST00000485065 TRMT112Q9UI30 125 aaKnown RBP12.81□□□□□ -0.36
TRUB1-202ENST00000485065 MAPK8IP3Q9UPT6 1336 aa12.81□□□□□ -0.36
TRUB1-202ENST00000485065 MMP14P50281 582 aa12.8□□□□□ -0.36
TRUB1-202ENST00000485065 PTPN12Q05209 780 aaKnown RBP12.8□□□□□ -0.36
TRUB1-202ENST00000485065 ZNF710Q8N1W2 664 aa12.8□□□□□ -0.36
TRUB1-202ENST00000485065 ZNF333Q96JL9 665 aa12.8□□□□□ -0.36
TRUB1-202ENST00000485065 PSME4Q14997 1843 aa12.79□□□□□ -0.36
TRUB1-202ENST00000485065 NEFMP07197 916 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms