RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 HSPA6P17066 643 aa20.28■□□□□ 0.84
DDR1-246ENST00000485023 CHADLQ6NUI6 762 aa20.28■□□□□ 0.84
DDR1-246ENST00000485023 LDHDQ86WU2 507 aa20.28■□□□□ 0.84
DDR1-246ENST00000485023 MICALL2Q8IY33 904 aa20.28■□□□□ 0.84
DDR1-246ENST00000485023 HDAC5Q9UQL6 1122 aa20.28■□□□□ 0.84
DDR1-246ENST00000485023 RIPOR2Q9Y4F9 1068 aa20.28■□□□□ 0.84
DDR1-246ENST00000485023 MROH5Q6ZUA9 1318 aa20.27■□□□□ 0.84
DDR1-246ENST00000485023 PTPN12Q05209 780 aaKnown RBP20.27■□□□□ 0.84
DDR1-246ENST00000485023 PODNQ7Z5L7 613 aa20.27■□□□□ 0.84
DDR1-246ENST00000485023 PNMA8AQ86V59 439 aaPredicted RBP20.27■□□□□ 0.84
DDR1-246ENST00000485023 COA1Q9GZY4 146 aa20.27■□□□□ 0.84
DDR1-246ENST00000485023 CNOT7Q9UIV1 285 aaKnown RBP20.27■□□□□ 0.84
DDR1-246ENST00000485023 PA2G4Q9UQ80 394 aaKnown RBP20.27■□□□□ 0.84
DDR1-246ENST00000485023 GNAI2P04899 355 aa20.26■□□□□ 0.83
DDR1-246ENST00000485023 MXD3Q9BW11 206 aa20.26■□□□□ 0.83
DDR1-246ENST00000485023 C1orf115Q9H7X2 142 aa20.26■□□□□ 0.83
DDR1-246ENST00000485023 ADARB2Q9NS39 739 aaKnown RBP20.26■□□□□ 0.83
DDR1-246ENST00000485023 ADAMTSL1Q8N6G6 1762 aa20.26■□□□□ 0.83
DDR1-246ENST00000485023 IRS2Q9Y4H2 1338 aa20.26■□□□□ 0.83
DDR1-246ENST00000485023 USP17L3A6NCW0 530 aa20.25■□□□□ 0.83
DDR1-246ENST00000485023 USP17L4A6NCW7 530 aa20.25■□□□□ 0.83
DDR1-246ENST00000485023 EYA2O00167 538 aa20.25■□□□□ 0.83
DDR1-246ENST00000485023 MAP1SQ66K74 1059 aaPredicted RBP20.25■□□□□ 0.83
DDR1-246ENST00000485023 RSBN1LQ6PCB5 846 aaPredicted RBP20.25■□□□□ 0.83
DDR1-246ENST00000485023 USP17L1Q7RTZ2 530 aa20.25■□□□□ 0.83
DDR1-246ENST00000485023 TRPM4Q8TD43 1214 aa20.25■□□□□ 0.83
DDR1-246ENST00000485023 SRGAP3O43295 1099 aa20.24■□□□□ 0.83
DDR1-246ENST00000485023 VIL1P09327 827 aaKnown RBP20.24■□□□□ 0.83
DDR1-246ENST00000485023 USP50Q70EL3 339 aaPredicted RBP20.24■□□□□ 0.83
DDR1-246ENST00000485023 SAMD7Q7Z3H4 446 aa20.24■□□□□ 0.83
DDR1-246ENST00000485023 ZNF804AQ7Z570 1209 aa20.24■□□□□ 0.83
DDR1-246ENST00000485023 H7C1D1 291 aa20.23■□□□□ 0.83
DDR1-246ENST00000485023 RPS12P25398 132 aaKnown RBP20.23■□□□□ 0.83
DDR1-246ENST00000485023 GYG1P46976 350 aa20.23■□□□□ 0.83
DDR1-246ENST00000485023 HTRA3P83110 453 aa20.23■□□□□ 0.83
DDR1-246ENST00000485023 TBC1D10BQ4KMP7 808 aaPredicted RBP20.23■□□□□ 0.83
DDR1-246ENST00000485023 RBM26Q5T8P6 1007 aaKnown RBP20.23■□□□□ 0.83
DDR1-246ENST00000485023 CD209Q9NNX6 404 aa20.23■□□□□ 0.83
DDR1-246ENST00000485023 JAG2Q9Y219 1238 aa20.23■□□□□ 0.83
DDR1-246ENST00000485023 PDE8BO95263 885 aa20.22■□□□□ 0.83
DDR1-246ENST00000485023 EGFRP00533 1210 aa20.22■□□□□ 0.83
DDR1-246ENST00000485023 GTF2IP78347 998 aa20.22■□□□□ 0.83
DDR1-246ENST00000485023 UBE4AQ14139 1066 aa20.22■□□□□ 0.83
DDR1-246ENST00000485023 DACT2Q5SW24 774 aa20.22■□□□□ 0.83
DDR1-246ENST00000485023 C15orf52Q6ZUT6 534 aaKnown RBP20.22■□□□□ 0.83
DDR1-246ENST00000485023 ATG9AQ7Z3C6 839 aa20.22■□□□□ 0.83
DDR1-246ENST00000485023 VGLL2Q8N8G2 317 aa20.22■□□□□ 0.83
DDR1-246ENST00000485023 DPF2Q92785 391 aa20.22■□□□□ 0.83
DDR1-246ENST00000485023 PSME4Q14997 1843 aa20.22■□□□□ 0.83
DDR1-246ENST00000485023 ZNF646O15015 1829 aaPredicted RBP20.2■□□□□ 0.82
DDR1-246ENST00000485023 PNMA6EA0A0J9YXQ4 647 aa20.2■□□□□ 0.82
DDR1-246ENST00000485023 HIRAP54198 1017 aaPredicted RBP20.2■□□□□ 0.82
DDR1-246ENST00000485023 MTX1Q13505 466 aa20.2■□□□□ 0.82
DDR1-246ENST00000485023 STRIP1Q5VSL9 837 aa20.2■□□□□ 0.82
DDR1-246ENST00000485023 TTLL5Q6EMB2 1281 aa20.2■□□□□ 0.82
DDR1-246ENST00000485023 CNTROBQ8N137 903 aa20.2■□□□□ 0.82
DDR1-246ENST00000485023 ZBTB7BO15156 539 aaPredicted RBP20.19■□□□□ 0.82
DDR1-246ENST00000485023 CIAO1O76071 339 aa20.19■□□□□ 0.82
DDR1-246ENST00000485023 HIBADHP31937 336 aaKnown RBP20.19■□□□□ 0.82
DDR1-246ENST00000485023 APLP1P51693 650 aa20.19■□□□□ 0.82
DDR1-246ENST00000485023 PUM3Q15397 648 aaKnown RBP20.19■□□□□ 0.82
DDR1-246ENST00000485023 AGBL3Q8NEM8 1001 aa20.19■□□□□ 0.82
DDR1-246ENST00000485023 COPRSQ9NQ92 184 aa20.19■□□□□ 0.82
DDR1-246ENST00000485023 IQSEC3Q9UPP2 1182 aaPredicted RBP20.19■□□□□ 0.82
DDR1-246ENST00000485023 COG6Q9Y2V7 657 aa20.19■□□□□ 0.82
DDR1-246ENST00000485023 USP17L8P0C7I0 530 aa20.18■□□□□ 0.82
DDR1-246ENST00000485023 MS4A1P11836 297 aa20.18■□□□□ 0.82
DDR1-246ENST00000485023 KIF4BQ2VIQ3 1234 aa20.18■□□□□ 0.82
DDR1-246ENST00000485023 VPS37DQ86XT2 251 aa20.18■□□□□ 0.82
DDR1-246ENST00000485023 FAM84BQ96KN1 310 aaPredicted RBP20.18■□□□□ 0.82
DDR1-246ENST00000485023 GMLQ99445 158 aa20.18■□□□□ 0.82
DDR1-246ENST00000485023 ZNF609O15014 1411 aa20.18■□□□□ 0.82
DDR1-246ENST00000485023 IL1R1P14778 569 aa20.17■□□□□ 0.82
DDR1-246ENST00000485023 IL15P40933 162 aaPredicted RBP20.17■□□□□ 0.82
DDR1-246ENST00000485023 FMR1Q06787 632 aaKnown RBP eCLIP20.17■□□□□ 0.82
DDR1-246ENST00000485023 C20orf194Q5TEA3 1177 aa20.17■□□□□ 0.82
DDR1-246ENST00000485023 KIAA0825Q8IV33 1275 aa20.17■□□□□ 0.82
DDR1-246ENST00000485023 CEP126Q9P2H0 1117 aa20.17■□□□□ 0.82
DDR1-246ENST00000485023 F8W031 263 aaPredicted RBP20.16■□□□□ 0.82
DDR1-246ENST00000485023 TRAF5O00463 557 aa20.16■□□□□ 0.82
DDR1-246ENST00000485023 ITGBL1O95965 494 aaPredicted RBP20.16■□□□□ 0.82
DDR1-246ENST00000485023 IFIT1P09914 478 aaKnown RBP20.16■□□□□ 0.82
DDR1-246ENST00000485023 SLC5A1P13866 664 aa20.16■□□□□ 0.82
DDR1-246ENST00000485023 FGFR2P21802 821 aa20.16■□□□□ 0.82
DDR1-246ENST00000485023 MVPQ14764 893 aaKnown RBP20.16■□□□□ 0.82
DDR1-246ENST00000485023 CAVIN4Q5BKX8 364 aa20.16■□□□□ 0.82
DDR1-246ENST00000485023 FBXO3Q9UK99 471 aa20.16■□□□□ 0.82
DDR1-246ENST00000485023 ASTN2O75129 1339 aaPredicted RBP20.16■□□□□ 0.82
DDR1-246ENST00000485023 MYO3BQ8WXR4 1341 aa20.16■□□□□ 0.82
DDR1-246ENST00000485023 PASKQ96RG2 1323 aa20.16■□□□□ 0.82
DDR1-246ENST00000485023 BCAMP50895 628 aa20.15■□□□□ 0.82
DDR1-246ENST00000485023 ZNF280AP59817 542 aaPredicted RBP20.15■□□□□ 0.82
DDR1-246ENST00000485023 CHAF1AQ13111 956 aaPredicted RBP20.15■□□□□ 0.82
DDR1-246ENST00000485023 ATP2B3Q16720 1220 aa20.15■□□□□ 0.82
DDR1-246ENST00000485023 CERS5Q8N5B7 392 aa20.15■□□□□ 0.82
DDR1-246ENST00000485023 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.15■□□□□ 0.82
DDR1-246ENST00000485023 LPIN2Q92539 896 aa20.15■□□□□ 0.82
DDR1-246ENST00000485023 GLIS2Q9BZE0 524 aaPredicted RBP20.15■□□□□ 0.82
DDR1-246ENST00000485023 MYOZ2Q9NPC6 264 aa20.15■□□□□ 0.82
DDR1-246ENST00000485023 FRAT2O75474 233 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms