RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 EDN3P14138 238 aa8.09□□□□□ -1.11
SMC4-215ENST00000484799 GLB1P16278 677 aa8.09□□□□□ -1.11
SMC4-215ENST00000484799 NOS3P29474 1203 aa8.09□□□□□ -1.11
SMC4-215ENST00000484799 CD68P34810 354 aaPredicted RBP8.09□□□□□ -1.11
SMC4-215ENST00000484799 SETDB1Q15047 1291 aa8.09□□□□□ -1.11
SMC4-215ENST00000484799 ILDR2Q71H61 639 aa8.09□□□□□ -1.11
SMC4-215ENST00000484799 GLYCTKQ8IVS8 523 aa8.09□□□□□ -1.11
SMC4-215ENST00000484799 TMEM130Q8N3G9 435 aa8.09□□□□□ -1.11
SMC4-215ENST00000484799 KLHL23Q8NBE8 558 aa8.09□□□□□ -1.11
SMC4-215ENST00000484799 SH2B1Q9NRF2 756 aaPredicted RBP8.09□□□□□ -1.11
SMC4-215ENST00000484799 PDE2AO00408 941 aaPredicted RBP8.08□□□□□ -1.12
SMC4-215ENST00000484799 ALX3O95076 343 aa8.08□□□□□ -1.12
SMC4-215ENST00000484799 ZNF211Q13398 564 aaPredicted RBP8.08□□□□□ -1.12
SMC4-215ENST00000484799 PRSS36Q5K4E3 855 aa8.08□□□□□ -1.12
SMC4-215ENST00000484799 POP1Q99575 1024 aaKnown RBP8.08□□□□□ -1.12
SMC4-215ENST00000484799 SEC31BQ9NQW1 1179 aa8.08□□□□□ -1.12
SMC4-215ENST00000484799 SALL4Q9UJQ4 1053 aa8.08□□□□□ -1.12
SMC4-215ENST00000484799 FSCN2O14926 492 aa8.07□□□□□ -1.12
SMC4-215ENST00000484799 DUOXA2Q1HG44 320 aa8.07□□□□□ -1.12
SMC4-215ENST00000484799 TMC1Q8TDI8 760 aa8.07□□□□□ -1.12
SMC4-215ENST00000484799 SNX29Q8TEQ0 813 aa8.07□□□□□ -1.12
SMC4-215ENST00000484799 LOC100996750A0A140TA64 210 aa8.06□□□□□ -1.12
SMC4-215ENST00000484799 F8W735 103 aaPredicted RBP8.06□□□□□ -1.12
SMC4-215ENST00000484799 SART1O43290 800 aaKnown RBP8.06□□□□□ -1.12
SMC4-215ENST00000484799 TNFRSF21O75509 655 aa8.06□□□□□ -1.12
SMC4-215ENST00000484799 NPR3P17342 541 aa8.06□□□□□ -1.12
SMC4-215ENST00000484799 ACAD11Q709F0 780 aa8.06□□□□□ -1.12
SMC4-215ENST00000484799 SLC7A3Q8WY07 619 aa8.06□□□□□ -1.12
SMC4-215ENST00000484799 OSMRQ99650 979 aa8.06□□□□□ -1.12
SMC4-215ENST00000484799 CARD10Q9BWT7 1032 aa8.06□□□□□ -1.12
SMC4-215ENST00000484799 KRTAP4-6Q9BYQ5 205 aa8.06□□□□□ -1.12
SMC4-215ENST00000484799 CEP41Q9BYV8 373 aa8.06□□□□□ -1.12
SMC4-215ENST00000484799 NDUFB5O43674 189 aa8.05□□□□□ -1.12
SMC4-215ENST00000484799 ASAP3Q8TDY4 903 aa8.05□□□□□ -1.12
SMC4-215ENST00000484799 ADAM19Q9H013 955 aa8.05□□□□□ -1.12
SMC4-215ENST00000484799 EGFL7Q9UHF1 273 aa8.05□□□□□ -1.12
SMC4-215ENST00000484799 H3BRB1 525 aa8.04□□□□□ -1.12
SMC4-215ENST00000484799 H3BRJ5 948 aa8.04□□□□□ -1.12
SMC4-215ENST00000484799 PIP4K2BP78356 416 aa8.04□□□□□ -1.12
SMC4-215ENST00000484799 PHLDB3Q6NSJ2 640 aa8.04□□□□□ -1.12
SMC4-215ENST00000484799 CCER1Q8TC90 406 aaPredicted RBP8.04□□□□□ -1.12
SMC4-215ENST00000484799 WNT8BQ93098 351 aa8.04□□□□□ -1.12
SMC4-215ENST00000484799 TUT1Q9H6E5 874 aaKnown RBP8.04□□□□□ -1.12
SMC4-215ENST00000484799 CCDC87Q9NVE4 849 aa8.04□□□□□ -1.12
SMC4-215ENST00000484799 DZANK1Q9NVP4 752 aa8.04□□□□□ -1.12
SMC4-215ENST00000484799 AMOTL2Q9Y2J4 779 aa8.04□□□□□ -1.12
SMC4-215ENST00000484799 EREGO14944 169 aa8.03□□□□□ -1.12
SMC4-215ENST00000484799 ICMTO60725 284 aa8.03□□□□□ -1.12
SMC4-215ENST00000484799 EPHA1P21709 976 aa8.03□□□□□ -1.12
SMC4-215ENST00000484799 PDE3BQ13370 1112 aa8.03□□□□□ -1.12
SMC4-215ENST00000484799 AGGF1Q8N302 714 aaeCLIP8.03□□□□□ -1.12
SMC4-215ENST00000484799 Q8N3U1 123 aa8.03□□□□□ -1.12
SMC4-215ENST00000484799 GALNT11Q8NCW6 608 aa8.03□□□□□ -1.12
SMC4-215ENST00000484799 MEGF10Q96KG7 1140 aa8.03□□□□□ -1.12
SMC4-215ENST00000484799 OSGEPQ9NPF4 335 aa8.03□□□□□ -1.12
SMC4-215ENST00000484799 FZD6O60353 706 aa8.02□□□□□ -1.13
SMC4-215ENST00000484799 TRPA1O75762 1119 aa8.02□□□□□ -1.13
SMC4-215ENST00000484799 IKBKEQ14164 716 aa8.02□□□□□ -1.13
SMC4-215ENST00000484799 NBPF11Q86T75 865 aa8.02□□□□□ -1.13
SMC4-215ENST00000484799 TMEM102Q8N9M5 508 aaPredicted RBP8.02□□□□□ -1.13
SMC4-215ENST00000484799 BSNDQ8WZ55 320 aa8.02□□□□□ -1.13
SMC4-215ENST00000484799 KLHDC7BQ96G42 594 aa8.02□□□□□ -1.13
SMC4-215ENST00000484799 FOXD3Q9UJU5 478 aaPredicted RBP8.02□□□□□ -1.13
SMC4-215ENST00000484799 DHX15O43143 795 aaKnown RBP8.01□□□□□ -1.13
SMC4-215ENST00000484799 EIF4EBP3O60516 100 aaPredicted RBP8.01□□□□□ -1.13
SMC4-215ENST00000484799 C19orf57Q0VDD7 668 aa8.01□□□□□ -1.13
SMC4-215ENST00000484799 PRR23CQ6ZRP0 262 aa8.01□□□□□ -1.13
SMC4-215ENST00000484799 SSBP4Q9BWG4 385 aaPredicted RBP8.01□□□□□ -1.13
SMC4-215ENST00000484799 ZFYVE28Q9HCC9 887 aa8.01□□□□□ -1.13
SMC4-215ENST00000484799 STOML1Q9UBI4 398 aa8.01□□□□□ -1.13
SMC4-215ENST00000484799 ACPPP15309 386 aa8□□□□□ -1.13
SMC4-215ENST00000484799 SERPINB4P48594 390 aa8□□□□□ -1.13
SMC4-215ENST00000484799 NLRP12P59046 1061 aa8□□□□□ -1.13
SMC4-215ENST00000484799 ZC3HAV1Q7Z2W4 902 aaKnown RBP8□□□□□ -1.13
SMC4-215ENST00000484799 SLC51AQ86UW1 340 aa8□□□□□ -1.13
SMC4-215ENST00000484799 DZIP1LQ8IYY4 767 aaKnown RBP8□□□□□ -1.13
SMC4-215ENST00000484799 NXPE3Q969Y0 559 aa8□□□□□ -1.13
SMC4-215ENST00000484799 CHRDQ9H2X0 955 aa8□□□□□ -1.13
SMC4-215ENST00000484799 DDX3YO15523 660 aaKnown RBP7.99□□□□□ -1.13
SMC4-215ENST00000484799 FDX2Q6P4F2 183 aa7.99□□□□□ -1.13
SMC4-215ENST00000484799 UTP4Q969X6 686 aaKnown RBP7.99□□□□□ -1.13
SMC4-215ENST00000484799 ZKSCAN3Q9BRR0 538 aa7.99□□□□□ -1.13
SMC4-215ENST00000484799 RAXQ9Y2V3 346 aa7.99□□□□□ -1.13
SMC4-215ENST00000484799 GSC2O15499 205 aa7.98□□□□□ -1.13
SMC4-215ENST00000484799 POLR3DP05423 398 aaPredicted RBP7.98□□□□□ -1.13
SMC4-215ENST00000484799 FOXD4L6Q3SYB3 417 aaPredicted RBP7.98□□□□□ -1.13
SMC4-215ENST00000484799 FOXD4L3Q6VB84 417 aaPredicted RBP7.98□□□□□ -1.13
SMC4-215ENST00000484799 GJD3Q8N144 294 aa7.98□□□□□ -1.13
SMC4-215ENST00000484799 RETREG2Q8NC44 543 aa7.98□□□□□ -1.13
SMC4-215ENST00000484799 DDX54Q8TDD1 881 aaKnown RBP7.98□□□□□ -1.13
SMC4-215ENST00000484799 RUSC1Q9BVN2 902 aa7.98□□□□□ -1.13
SMC4-215ENST00000484799 ZFP64Q9NPA5 681 aa7.98□□□□□ -1.13
SMC4-215ENST00000484799 KCNK4Q9NYG8 393 aa7.98□□□□□ -1.13
SMC4-215ENST00000484799 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.98□□□□□ -1.13
SMC4-215ENST00000484799 NFKBIEO00221 500 aa7.97□□□□□ -1.13
SMC4-215ENST00000484799 ITGB7P26010 798 aa7.97□□□□□ -1.13
SMC4-215ENST00000484799 NUTM2GQ5VZR2 741 aa7.97□□□□□ -1.13
SMC4-215ENST00000484799 HHIPQ96QV1 700 aa7.97□□□□□ -1.13
SMC4-215ENST00000484799 CITED4Q96RK1 184 aa7.97□□□□□ -1.13
SMC4-215ENST00000484799 USP26Q9BXU7 913 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms