RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 UQCRFS1P1P0C7P4 283 aa24.88■■□□□ 1.57
VCPKMT-203ENST00000484763 ARID4AP29374 1257 aaPredicted RBP24.88■■□□□ 1.57
VCPKMT-203ENST00000484763 PHKA1P46020 1223 aa24.88■■□□□ 1.57
VCPKMT-203ENST00000484763 PRPF40BQ6NWY9 871 aaKnown RBP24.88■■□□□ 1.57
VCPKMT-203ENST00000484763 TBC1D9Q6ZT07 1266 aa24.88■■□□□ 1.57
VCPKMT-203ENST00000484763 DNAJC2Q99543 621 aaKnown RBP24.88■■□□□ 1.57
VCPKMT-203ENST00000484763 PODXL2Q9NZ53 605 aa24.88■■□□□ 1.57
VCPKMT-203ENST00000484763 NSFL1CQ9UNZ2 370 aaKnown RBP24.88■■□□□ 1.57
VCPKMT-203ENST00000484763 AKAP11Q9UKA4 1901 aa24.88■■□□□ 1.57
VCPKMT-203ENST00000484763 PTGER2P43116 358 aa24.87■■□□□ 1.57
VCPKMT-203ENST00000484763 CASC1Q6TDU7 716 aa24.87■■□□□ 1.57
VCPKMT-203ENST00000484763 TMX4Q9H1E5 349 aaPredicted RBP24.87■■□□□ 1.57
VCPKMT-203ENST00000484763 WTIPA6NIX2 430 aaPredicted RBP24.86■■□□□ 1.57
VCPKMT-203ENST00000484763 ATP2B4P23634 1241 aa24.86■■□□□ 1.57
VCPKMT-203ENST00000484763 CAVIN4Q5BKX8 364 aa24.86■■□□□ 1.57
VCPKMT-203ENST00000484763 GGA1Q9UJY5 639 aa24.86■■□□□ 1.57
VCPKMT-203ENST00000484763 BCAMP50895 628 aa24.85■■□□□ 1.57
VCPKMT-203ENST00000484763 TGFB2P61812 414 aa24.85■■□□□ 1.57
VCPKMT-203ENST00000484763 UFL1O94874 794 aa24.84■■□□□ 1.57
VCPKMT-203ENST00000484763 MCAMP43121 646 aa24.84■■□□□ 1.57
VCPKMT-203ENST00000484763 PAG1Q9NWQ8 432 aa24.84■■□□□ 1.57
VCPKMT-203ENST00000484763 NDUFB9Q9Y6M9 179 aa24.84■■□□□ 1.57
VCPKMT-203ENST00000484763 DPEP1P16444 411 aa24.84■■□□□ 1.57
VCPKMT-203ENST00000484763 GYG1P46976 350 aa24.84■■□□□ 1.57
VCPKMT-203ENST00000484763 SCARF1Q14162 830 aa24.84■■□□□ 1.57
VCPKMT-203ENST00000484763 IRS2Q9Y4H2 1338 aa24.83■■□□□ 1.57
VCPKMT-203ENST00000484763 MYH13Q9UKX3 1938 aa24.83■■□□□ 1.57
VCPKMT-203ENST00000484763 KLRK1P26718 216 aa24.83■■□□□ 1.57
VCPKMT-203ENST00000484763 VPS37DQ86XT2 251 aa24.83■■□□□ 1.57
VCPKMT-203ENST00000484763 EDC3Q96F86 508 aaKnown RBP24.83■■□□□ 1.57
VCPKMT-203ENST00000484763 FAM84BQ96KN1 310 aaPredicted RBP24.83■■□□□ 1.57
VCPKMT-203ENST00000484763 FSD1Q9BTV5 496 aa24.83■■□□□ 1.57
VCPKMT-203ENST00000484763 GNL3LQ9NVN8 582 aaKnown RBP24.83■■□□□ 1.57
VCPKMT-203ENST00000484763 RFX7Q2KHR2 1363 aa24.82■■□□□ 1.56
VCPKMT-203ENST00000484763 A0A0G2JLW4 131 aa24.82■■□□□ 1.56
VCPKMT-203ENST00000484763 GOLIM4O00461 696 aa24.82■■□□□ 1.56
VCPKMT-203ENST00000484763 FKBP4Q02790 459 aaKnown RBP eCLIP24.82■■□□□ 1.56
VCPKMT-203ENST00000484763 C15orf52Q6ZUT6 534 aaKnown RBP24.82■■□□□ 1.56
VCPKMT-203ENST00000484763 SPON1Q9HCB6 807 aa24.82■■□□□ 1.56
VCPKMT-203ENST00000484763 DUOX1Q9NRD9 1551 aa24.82■■□□□ 1.56
VCPKMT-203ENST00000484763 CD2APQ9Y5K6 639 aa24.82■■□□□ 1.56
VCPKMT-203ENST00000484763 CHMLP26374 656 aa24.82■■□□□ 1.56
VCPKMT-203ENST00000484763 FBXO33Q7Z6M2 555 aa24.82■■□□□ 1.56
VCPKMT-203ENST00000484763 TTLL6Q8N841 843 aa24.82■■□□□ 1.56
VCPKMT-203ENST00000484763 TBC1D16Q8TBP0 767 aa24.82■■□□□ 1.56
VCPKMT-203ENST00000484763 TSHZ2Q9NRE2 1034 aa24.82■■□□□ 1.56
VCPKMT-203ENST00000484763 SNRKQ9NRH2 765 aa24.82■■□□□ 1.56
VCPKMT-203ENST00000484763 KCNA3P22001 575 aa24.81■■□□□ 1.56
VCPKMT-203ENST00000484763 RASGRF1Q13972 1273 aa24.81■■□□□ 1.56
VCPKMT-203ENST00000484763 MPNDQ8N594 471 aa24.81■■□□□ 1.56
VCPKMT-203ENST00000484763 BRCA1P38398 1863 aaKnown RBP24.81■■□□□ 1.56
VCPKMT-203ENST00000484763 HIBADHP31937 336 aaKnown RBP24.8■■□□□ 1.56
VCPKMT-203ENST00000484763 ZAP70P43403 619 aa24.8■■□□□ 1.56
VCPKMT-203ENST00000484763 OLFM4Q6UX06 510 aa24.8■■□□□ 1.56
VCPKMT-203ENST00000484763 PI16Q6UXB8 463 aa24.8■■□□□ 1.56
VCPKMT-203ENST00000484763 DPP8Q6V1X1 898 aaPredicted RBP24.8■■□□□ 1.56
VCPKMT-203ENST00000484763 KBTBD3Q8NAB2 608 aa24.8■■□□□ 1.56
VCPKMT-203ENST00000484763 POLLQ9UGP5 575 aa24.8■■□□□ 1.56
VCPKMT-203ENST00000484763 MED23Q9ULK4 1368 aa24.8■■□□□ 1.56
VCPKMT-203ENST00000484763 HIP1O00291 1037 aa24.79■■□□□ 1.56
VCPKMT-203ENST00000484763 EIF5BO60841 1220 aaKnown RBP24.79■■□□□ 1.56
VCPKMT-203ENST00000484763 SPATA5Q8NB90 893 aa24.79■■□□□ 1.56
VCPKMT-203ENST00000484763 HMG20BQ9P0W2 317 aa24.79■■□□□ 1.56
VCPKMT-203ENST00000484763 PPP1R1BQ9UD71 204 aaPredicted RBP24.79■■□□□ 1.56
VCPKMT-203ENST00000484763 C6orf229H3BNL8 230 aa24.79■■□□□ 1.56
VCPKMT-203ENST00000484763 SEC24BO95487 1268 aa24.79■■□□□ 1.56
VCPKMT-203ENST00000484763 CC2D2BQ6DHV5 1058 aa24.79■■□□□ 1.56
VCPKMT-203ENST00000484763 TXNRD3Q86VQ6 643 aa24.79■■□□□ 1.56
VCPKMT-203ENST00000484763 C7orf43Q8WVR3 580 aa24.79■■□□□ 1.56
VCPKMT-203ENST00000484763 TICAM2Q86XR7 235 aa24.78■■□□□ 1.56
VCPKMT-203ENST00000484763 KLHL34Q8N239 644 aa24.78■■□□□ 1.56
VCPKMT-203ENST00000484763 ANTXR1Q9H6X2 564 aa24.78■■□□□ 1.56
VCPKMT-203ENST00000484763 DIAPH3Q9NSV4 1193 aa24.78■■□□□ 1.56
VCPKMT-203ENST00000484763 MYH7P12883 1935 aa24.78■■□□□ 1.56
VCPKMT-203ENST00000484763 SEMA3EO15041 775 aa24.77■■□□□ 1.56
VCPKMT-203ENST00000484763 TTF1Q15361 905 aaPredicted RBP24.77■■□□□ 1.56
VCPKMT-203ENST00000484763 ZNF804AQ7Z570 1209 aa24.77■■□□□ 1.56
VCPKMT-203ENST00000484763 GPR101Q96P66 508 aaPredicted RBP24.77■■□□□ 1.56
VCPKMT-203ENST00000484763 DOCK2Q92608 1830 aa24.77■■□□□ 1.56
VCPKMT-203ENST00000484763 ZBTB22O15209 634 aa24.77■■□□□ 1.56
VCPKMT-203ENST00000484763 PIM2Q9P1W9 311 aa24.77■■□□□ 1.56
VCPKMT-203ENST00000484763 ZNF219Q9P2Y4 722 aaPredicted RBP24.77■■□□□ 1.56
VCPKMT-203ENST00000484763 COL1A1P02452 1464 aaPredicted RBP24.76■■□□□ 1.55
VCPKMT-203ENST00000484763 SNED1Q8TER0 1413 aa24.76■■□□□ 1.55
VCPKMT-203ENST00000484763 CYP2E1P05181 493 aaPredicted RBP24.76■■□□□ 1.55
VCPKMT-203ENST00000484763 DENND2AQ9ULE3 1009 aa24.76■■□□□ 1.55
VCPKMT-203ENST00000484763 IQSEC3Q9UPP2 1182 aaPredicted RBP24.76■■□□□ 1.55
VCPKMT-203ENST00000484763 PDS5AQ29RF7 1337 aaKnown RBP24.75■■□□□ 1.55
VCPKMT-203ENST00000484763 MFAP1P55081 439 aaKnown RBP24.75■■□□□ 1.55
VCPKMT-203ENST00000484763 GRIPAP1Q4V328 841 aa24.75■■□□□ 1.55
VCPKMT-203ENST00000484763 ESYT1Q9BSJ8 1104 aa24.75■■□□□ 1.55
VCPKMT-203ENST00000484763 UPF2Q9HAU5 1272 aaKnown RBP24.75■■□□□ 1.55
VCPKMT-203ENST00000484763 C21orf2O43822 256 aa24.74■■□□□ 1.55
VCPKMT-203ENST00000484763 FRAT2O75474 233 aaPredicted RBP24.74■■□□□ 1.55
VCPKMT-203ENST00000484763 LRRFIP1Q32MZ4 808 aaKnown RBP24.74■■□□□ 1.55
VCPKMT-203ENST00000484763 RUFY2Q8WXA3 655 aa24.74■■□□□ 1.55
VCPKMT-203ENST00000484763 EYA3Q99504 573 aa24.74■■□□□ 1.55
VCPKMT-203ENST00000484763 MYO5AQ9Y4I1 1855 aaKnown RBP24.74■■□□□ 1.55
VCPKMT-203ENST00000484763 CWC27Q6UX04 472 aaKnown RBP24.73■■□□□ 1.55
VCPKMT-203ENST00000484763 CCDC93Q567U6 631 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms