RNA–Protein interactions for RNA: ENST00000484552.5

CAST-210, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-210ENST00000484552 LRRC9Q6ZRR7 1453 aa9.54□□□□□ -0.88
CAST-210ENST00000484552 IQCA1LA6NCM1 817 aa9.54□□□□□ -0.88
CAST-210ENST00000484552 F8VZ95 297 aa9.54□□□□□ -0.88
CAST-210ENST00000484552 TNFRSF10BO14763 440 aa9.54□□□□□ -0.88
CAST-210ENST00000484552 MTRF1O75570 445 aaKnown RBP9.54□□□□□ -0.88
CAST-210ENST00000484552 BAIAP3O94812 1187 aa9.54□□□□□ -0.88
CAST-210ENST00000484552 GEMIN4P57678 1058 aaKnown RBP9.54□□□□□ -0.88
CAST-210ENST00000484552 RBM6P78332 1123 aaKnown RBP9.54□□□□□ -0.88
CAST-210ENST00000484552 PPP2R5AQ15172 486 aa9.54□□□□□ -0.88
CAST-210ENST00000484552 WWC2Q6AWC2 1192 aa9.54□□□□□ -0.88
CAST-210ENST00000484552 SNX32Q86XE0 403 aa9.54□□□□□ -0.88
CAST-210ENST00000484552 TNPO1Q92973 898 aaKnown RBP9.54□□□□□ -0.88
CAST-210ENST00000484552 BAG1Q99933 345 aaPredicted RBP9.54□□□□□ -0.88
CAST-210ENST00000484552 FAM167BQ9BTA0 163 aa9.54□□□□□ -0.88
CAST-210ENST00000484552 GDPD2Q9HCC8 539 aa9.54□□□□□ -0.88
CAST-210ENST00000484552 RIC8AQ9NPQ8 531 aa9.54□□□□□ -0.88
CAST-210ENST00000484552 QPCTLQ9NXS2 382 aa9.54□□□□□ -0.88
CAST-210ENST00000484552 PGAP2Q9UHJ9 254 aa9.54□□□□□ -0.88
CAST-210ENST00000484552 RRP15Q9Y3B9 282 aaKnown RBP9.54□□□□□ -0.88
CAST-210ENST00000484552 TIAM1Q13009 1591 aa9.54□□□□□ -0.88
CAST-210ENST00000484552 H0Y3Z8 333 aa9.53□□□□□ -0.88
CAST-210ENST00000484552 LILRB3O75022 631 aa9.53□□□□□ -0.88
CAST-210ENST00000484552 CDKL5O76039 1030 aa9.53□□□□□ -0.88
CAST-210ENST00000484552 NSUN2Q08J23 767 aaKnown RBP eCLIP9.53□□□□□ -0.88
CAST-210ENST00000484552 MUM1Q2TAK8 710 aa9.53□□□□□ -0.88
CAST-210ENST00000484552 SLC4A8Q2Y0W8 1093 aa9.53□□□□□ -0.88
CAST-210ENST00000484552 CCDC178Q5BJE1 867 aa9.53□□□□□ -0.88
CAST-210ENST00000484552 MYSM1Q5VVJ2 828 aa9.53□□□□□ -0.88
CAST-210ENST00000484552 AP1ARQ63HQ0 302 aa9.53□□□□□ -0.88
CAST-210ENST00000484552 PPP1R18Q6NYC8 613 aa9.53□□□□□ -0.88
CAST-210ENST00000484552 CCDC91Q7Z6B0 441 aa9.53□□□□□ -0.88
CAST-210ENST00000484552 FERMT3Q86UX7 667 aa9.53□□□□□ -0.88
CAST-210ENST00000484552 NCAPG2Q86XI2 1143 aa9.53□□□□□ -0.88
CAST-210ENST00000484552 RBM12BQ8IXT5 1001 aaKnown RBP9.53□□□□□ -0.88
CAST-210ENST00000484552 NELL1Q92832 810 aa9.53□□□□□ -0.88
CAST-210ENST00000484552 KCNH8Q96L42 1107 aa9.53□□□□□ -0.88
CAST-210ENST00000484552 MAK16Q9BXY0 300 aaKnown RBP9.53□□□□□ -0.88
CAST-210ENST00000484552 BARX2Q9UMQ3 279 aaPredicted RBP9.53□□□□□ -0.88
CAST-210ENST00000484552 CCNB3Q8WWL7 1395 aa9.53□□□□□ -0.88
CAST-210ENST00000484552 FYCO1Q9BQS8 1478 aa9.53□□□□□ -0.88
CAST-210ENST00000484552 RAPGEF6Q8TEU7 1601 aa9.53□□□□□ -0.88
CAST-210ENST00000484552 BRD4O60885 1362 aaPredicted RBP9.52□□□□□ -0.88
CAST-210ENST00000484552 HARSP12081 509 aaKnown RBP9.52□□□□□ -0.88
CAST-210ENST00000484552 IDEP14735 1019 aa9.52□□□□□ -0.88
CAST-210ENST00000484552 NUP153P49790 1475 aaKnown RBP9.52□□□□□ -0.88
CAST-210ENST00000484552 SNX16P57768 344 aa9.52□□□□□ -0.88
CAST-210ENST00000484552 SFSWAPQ12872 951 aaKnown RBP9.52□□□□□ -0.88
CAST-210ENST00000484552 WTAPQ15007 396 aa9.52□□□□□ -0.88
CAST-210ENST00000484552 PTPN14Q15678 1187 aa9.52□□□□□ -0.88
CAST-210ENST00000484552 PREPLQ4J6C6 727 aaPredicted RBP9.52□□□□□ -0.88
CAST-210ENST00000484552 FAAH2Q6GMR7 532 aa9.52□□□□□ -0.88
CAST-210ENST00000484552 TRIM11Q96F44 468 aa9.52□□□□□ -0.88
CAST-210ENST00000484552 ABCA9Q8IUA7 1624 aa9.52□□□□□ -0.89
CAST-210ENST00000484552 ARAP3Q8WWN8 1544 aa9.52□□□□□ -0.89
CAST-210ENST00000484552 PRRT4C9JH25 899 aa9.52□□□□□ -0.89
CAST-210ENST00000484552 ENPP3O14638 875 aa9.52□□□□□ -0.89
CAST-210ENST00000484552 SGTAO43765 313 aa9.52□□□□□ -0.89
CAST-210ENST00000484552 NOS2P35228 1153 aa9.52□□□□□ -0.89
CAST-210ENST00000484552 GSCP56915 257 aaPredicted RBP9.52□□□□□ -0.89
CAST-210ENST00000484552 EIF4A2Q14240 407 aaKnown RBP9.52□□□□□ -0.89
CAST-210ENST00000484552 PDCD2Q16342 344 aaPredicted RBP9.52□□□□□ -0.89
CAST-210ENST00000484552 PKN1Q16512 942 aa9.52□□□□□ -0.89
CAST-210ENST00000484552 ZNF449Q6P9G9 518 aa9.52□□□□□ -0.89
CAST-210ENST00000484552 MCM10Q7L590 875 aa9.52□□□□□ -0.89
CAST-210ENST00000484552 WDR66Q8TBY9 1149 aa9.52□□□□□ -0.89
CAST-210ENST00000484552 CAPN10Q9HC96 672 aa9.52□□□□□ -0.89
CAST-210ENST00000484552 CCNCP24863 283 aa9.51□□□□□ -0.89
CAST-210ENST00000484552 ADCY2Q08462 1091 aa9.51□□□□□ -0.89
CAST-210ENST00000484552 ACBD5Q5T8D3 534 aaPredicted RBP9.51□□□□□ -0.89
CAST-210ENST00000484552 MCTP2Q6DN12 878 aa9.51□□□□□ -0.89
CAST-210ENST00000484552 USP48Q86UV5 1035 aa9.51□□□□□ -0.89
CAST-210ENST00000484552 DCAF11Q8TEB1 546 aa9.51□□□□□ -0.89
CAST-210ENST00000484552 HDAC7Q8WUI4 952 aa9.51□□□□□ -0.89
CAST-210ENST00000484552 TATDN2Q93075 761 aa9.51□□□□□ -0.89
CAST-210ENST00000484552 TRIM7Q9C029 511 aa9.51□□□□□ -0.89
CAST-210ENST00000484552 ATP6V0A2Q9Y487 856 aa9.51□□□□□ -0.89
CAST-210ENST00000484552 SOWAHDA6NJG2 315 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 CPLX1O14810 134 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 MYL1P05976 194 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 MYCLP1P12525 358 aaPredicted RBP9.5□□□□□ -0.89
CAST-210ENST00000484552 UBXN2AP68543 259 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 ALFQ53S48 1182 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 KIAA1614Q5VZ46 1190 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 TSHZ3Q63HK5 1081 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 IFNL3Q8IZI9 196 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 FLCNQ8NFG4 579 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 FRAT1Q92837 279 aaPredicted RBP9.5□□□□□ -0.89
CAST-210ENST00000484552 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.5□□□□□ -0.894e-10■□□□□ 9.7
CAST-210ENST00000484552 NACA2Q9H009 215 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 VPS33BQ9H267 617 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 GTF3C4Q9UKN8 822 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 CFAP45Q9UL16 551 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 TPCN1Q9ULQ1 816 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 PHLDB1Q86UU1 1377 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 NINLQ9Y2I6 1382 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 GYS1P13807 737 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 PRIM1P49642 420 aaKnown RBP9.5□□□□□ -0.89
CAST-210ENST00000484552 MYBPC3Q14896 1274 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 GRAMD1BQ3KR37 738 aa9.5□□□□□ -0.89
CAST-210ENST00000484552 ANKRD18AQ8IVF6 992 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms