RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 STYK1Q6J9G0 422 aa7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 C10orf71Q711Q0 1435 aa7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 ATG9AQ7Z3C6 839 aa7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 C2CD5Q86YS7 1000 aa7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 CCDC24Q8N4L8 307 aa7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 KLHDC4Q8TBB5 520 aa7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 GRAPLQ8TC17 118 aaPredicted RBP7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 GPATCH3Q96I76 525 aa7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 ZNF594Q96JF6 807 aaPredicted RBP7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 LNPKQ9C0E8 428 aa7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 ANKRD2Q9GZV1 360 aa7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 SPON1Q9HCB6 807 aa7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 SEC31BQ9NQW1 1179 aa7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 BSDC1Q9NW68 430 aaPredicted RBP7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 RIPOR2Q9Y4F9 1068 aa7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 MYH7P12883 1935 aa7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 SLX4Q8IY92 1834 aa7.99□□□□□ -1.13
PDZRN3-209ENST00000484487 KIAA1551Q9HCM1 1747 aa7.98□□□□□ -1.13
PDZRN3-209ENST00000484487 SASH1O94885 1247 aa7.98□□□□□ -1.13
PDZRN3-209ENST00000484487 IFIT2P09913 472 aaKnown RBP7.98□□□□□ -1.13
PDZRN3-209ENST00000484487 TGFB2P61812 414 aa7.98□□□□□ -1.13
PDZRN3-209ENST00000484487 TFCP2Q12800 502 aa7.98□□□□□ -1.13
PDZRN3-209ENST00000484487 C3orf67Q6ZVT6 689 aa7.98□□□□□ -1.13
PDZRN3-209ENST00000484487 CNKSR1Q969H4 720 aa7.98□□□□□ -1.13
PDZRN3-209ENST00000484487 ARFGEF1Q9Y6D6 1849 aa7.98□□□□□ -1.13
PDZRN3-209ENST00000484487 SMARCA5O60264 1052 aaPredicted RBP7.97□□□□□ -1.13
PDZRN3-209ENST00000484487 PDE8BO95263 885 aa7.97□□□□□ -1.13
PDZRN3-209ENST00000484487 GRIPAP1Q4V328 841 aa7.97□□□□□ -1.13
PDZRN3-209ENST00000484487 LRRC24Q50LG9 513 aa7.97□□□□□ -1.13
PDZRN3-209ENST00000484487 TNNI3KQ59H18 835 aa7.97□□□□□ -1.13
PDZRN3-209ENST00000484487 AACSQ86V21 672 aa7.97□□□□□ -1.13
PDZRN3-209ENST00000484487 CELF1Q92879 486 aaKnown RBP7.97□□□□□ -1.13
PDZRN3-209ENST00000484487 ZNF622Q969S3 477 aaKnown RBP eCLIP7.97□□□□□ -1.13
PDZRN3-209ENST00000484487 PUS3Q9BZE2 481 aaKnown RBP7.97□□□□□ -1.13
PDZRN3-209ENST00000484487 IL1RAPL2Q9NP60 686 aa7.97□□□□□ -1.13
PDZRN3-209ENST00000484487 CD2APQ9Y5K6 639 aa7.97□□□□□ -1.13
PDZRN3-209ENST00000484487 FPGT-TNNI3KV9GXZ4 949 aa7.97□□□□□ -1.13
PDZRN3-209ENST00000484487 CCDC88AQ3V6T2 1871 aa7.97□□□□□ -1.13
PDZRN3-209ENST00000484487 AOX1Q06278 1338 aa7.97□□□□□ -1.13
PDZRN3-209ENST00000484487 TTC41PQ6P2S7 1318 aa7.97□□□□□ -1.13
PDZRN3-209ENST00000484487 AKAP11Q9UKA4 1901 aa7.96□□□□□ -1.13
PDZRN3-209ENST00000484487 RIOK3O14730 519 aaKnown RBP7.96□□□□□ -1.14
PDZRN3-209ENST00000484487 ERC2O15083 957 aa7.96□□□□□ -1.14
PDZRN3-209ENST00000484487 SLC5A1P13866 664 aa7.96□□□□□ -1.14
PDZRN3-209ENST00000484487 MX1P20591 662 aa7.96□□□□□ -1.14
PDZRN3-209ENST00000484487 KCNJ4P48050 445 aa7.96□□□□□ -1.14
PDZRN3-209ENST00000484487 RGS3P49796 1198 aa7.96□□□□□ -1.14
PDZRN3-209ENST00000484487 CHRNDQ07001 517 aa7.96□□□□□ -1.14
PDZRN3-209ENST00000484487 PUM3Q15397 648 aaKnown RBP7.96□□□□□ -1.14
PDZRN3-209ENST00000484487 ATP2B3Q16720 1220 aa7.96□□□□□ -1.14
PDZRN3-209ENST00000484487 GORABQ5T7V8 394 aa7.96□□□□□ -1.14
PDZRN3-209ENST00000484487 CC2D2BQ6DHV5 1058 aa7.96□□□□□ -1.14
PDZRN3-209ENST00000484487 SP8Q8IXZ3 490 aa7.96□□□□□ -1.14
PDZRN3-209ENST00000484487 LPIN2Q92539 896 aa7.96□□□□□ -1.14
PDZRN3-209ENST00000484487 NEUROD6Q96NK8 337 aa7.96□□□□□ -1.14
PDZRN3-209ENST00000484487 OSBPL3Q9H4L5 887 aa7.96□□□□□ -1.14
PDZRN3-209ENST00000484487 STAP2Q9UGK3 403 aa7.96□□□□□ -1.14
PDZRN3-209ENST00000484487 MINPP1Q9UNW1 487 aa7.96□□□□□ -1.14
PDZRN3-209ENST00000484487 COL4A1P02462 1669 aa7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 ZNF609O15014 1411 aa7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 LTBP1Q14766 1721 aa7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 A0A1B0GUL7 405 aa7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 PPEF1O14829 653 aaPredicted RBP7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 ECM2O94769 699 aaPredicted RBP7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 IFIT1P09914 478 aaKnown RBP7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 PDE4AP27815 886 aa7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 UBE4AQ14139 1066 aa7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 CCDC158Q5M9N0 1113 aa7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 SOGA3Q5TF21 947 aa7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 PLEKHM2Q8IWE5 1019 aa7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 C16orf71Q8IYS4 520 aaPredicted RBP7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 VGLL2Q8N8G2 317 aa7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 EAF2Q96CJ1 260 aaPredicted RBP7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 BCL11AQ9H165 835 aa7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 ECHDC1Q9NTX5 307 aa7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 ANKIB1Q9P2G1 1089 aa7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 LEMD3Q9Y2U8 911 aa7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 ATP6V0A2Q9Y487 856 aa7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 XDHP47989 1333 aa7.95□□□□□ -1.14
PDZRN3-209ENST00000484487 FER1L6Q2WGJ9 1857 aa7.94□□□□□ -1.14
PDZRN3-209ENST00000484487 GLRX3O76003 335 aaKnown RBP7.94□□□□□ -1.14
PDZRN3-209ENST00000484487 UQCRFS1P1P0C7P4 283 aa7.94□□□□□ -1.14
PDZRN3-209ENST00000484487 ATP2B4P23634 1241 aa7.94□□□□□ -1.14
PDZRN3-209ENST00000484487 PTGER2P43116 358 aa7.94□□□□□ -1.14
PDZRN3-209ENST00000484487 PDE1AP54750 535 aa7.94□□□□□ -1.14
PDZRN3-209ENST00000484487 TIMM10P62072 90 aa7.94□□□□□ -1.14
PDZRN3-209ENST00000484487 TTLL6Q8N841 843 aa7.94□□□□□ -1.14
PDZRN3-209ENST00000484487 RNF25Q96BH1 459 aaPredicted RBP7.94□□□□□ -1.14
PDZRN3-209ENST00000484487 CCDC8Q9H0W5 538 aaPredicted RBP7.94□□□□□ -1.14
PDZRN3-209ENST00000484487 PODXL2Q9NZ53 605 aa7.94□□□□□ -1.14
PDZRN3-209ENST00000484487 PIM2Q9P1W9 311 aa7.94□□□□□ -1.14
PDZRN3-209ENST00000484487 SALL3Q9BXA9 1300 aa7.94□□□□□ -1.14
PDZRN3-209ENST00000484487 MYO5AQ9Y4I1 1855 aaKnown RBP7.94□□□□□ -1.14
PDZRN3-209ENST00000484487 EIF5BO60841 1220 aaKnown RBP7.93□□□□□ -1.14
PDZRN3-209ENST00000484487 TAF5LO75529 589 aa7.93□□□□□ -1.14
PDZRN3-209ENST00000484487 DPEP1P16444 411 aa7.93□□□□□ -1.14
PDZRN3-209ENST00000484487 ATP5JP18859 108 aa7.93□□□□□ -1.14
PDZRN3-209ENST00000484487 FGFR2P21802 821 aa7.93□□□□□ -1.14
PDZRN3-209ENST00000484487 CHRNA5P30532 468 aa7.93□□□□□ -1.14
PDZRN3-209ENST00000484487 CAVIN4Q5BKX8 364 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms