RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 SNAP23O00161 211 aa24.4■■□□□ 1.5
NDUFA3-213ENST00000484103 MAP2K1Q02750 393 aaPredicted RBP24.4■■□□□ 1.5
NDUFA3-213ENST00000484103 HELBQ8NG08 1087 aaPredicted RBP24.4■■□□□ 1.5
NDUFA3-213ENST00000484103 ANGEL2Q5VTE6 544 aaKnown RBP24.39■■□□□ 1.49
NDUFA3-213ENST00000484103 ZNF804BA4D1E1 1349 aa24.38■■□□□ 1.49
NDUFA3-213ENST00000484103 CACNA1FO60840 1977 aa24.38■■□□□ 1.49
NDUFA3-213ENST00000484103 TAF5LO75529 589 aa24.38■■□□□ 1.49
NDUFA3-213ENST00000484103 CSF1RP07333 972 aa24.38■■□□□ 1.49
NDUFA3-213ENST00000484103 USP17L8P0C7I0 530 aa24.38■■□□□ 1.49
NDUFA3-213ENST00000484103 HUNKP57058 714 aa24.38■■□□□ 1.49
NDUFA3-213ENST00000484103 FOXO4P98177 505 aa24.38■■□□□ 1.49
NDUFA3-213ENST00000484103 CHRNDQ07001 517 aa24.38■■□□□ 1.49
NDUFA3-213ENST00000484103 SCARF1Q14162 830 aa24.38■■□□□ 1.49
NDUFA3-213ENST00000484103 PODNQ7Z5L7 613 aa24.38■■□□□ 1.49
NDUFA3-213ENST00000484103 SULF1Q8IWU6 871 aa24.38■■□□□ 1.49
NDUFA3-213ENST00000484103 AGBL3Q8NEM8 1001 aa24.38■■□□□ 1.49
NDUFA3-213ENST00000484103 BEGAINQ9BUH8 593 aa24.38■■□□□ 1.49
NDUFA3-213ENST00000484103 HSPA8P11142 646 aaKnown RBP24.37■■□□□ 1.49
NDUFA3-213ENST00000484103 IFIT5Q13325 482 aaKnown RBP24.37■■□□□ 1.49
NDUFA3-213ENST00000484103 TAF7LQ5H9L4 462 aa24.37■■□□□ 1.49
NDUFA3-213ENST00000484103 EPHA10Q5JZY3 1008 aa24.37■■□□□ 1.49
NDUFA3-213ENST00000484103 LMBR1LQ6UX01 489 aa24.37■■□□□ 1.49
NDUFA3-213ENST00000484103 ZNF594Q96JF6 807 aaPredicted RBP24.37■■□□□ 1.49
NDUFA3-213ENST00000484103 ANKRD2Q9GZV1 360 aa24.37■■□□□ 1.49
NDUFA3-213ENST00000484103 MYOZ2Q9NPC6 264 aa24.37■■□□□ 1.49
NDUFA3-213ENST00000484103 C9orf78Q9NZ63 289 aaPredicted RBP24.37■■□□□ 1.49
NDUFA3-213ENST00000484103 POLR2AP24928 1970 aaKnown RBP24.36■■□□□ 1.49
NDUFA3-213ENST00000484103 GRM8O00222 908 aa24.36■■□□□ 1.49
NDUFA3-213ENST00000484103 PLIN1O60240 522 aa24.36■■□□□ 1.49
NDUFA3-213ENST00000484103 LEMD3Q9Y2U8 911 aa24.36■■□□□ 1.49
NDUFA3-213ENST00000484103 PSME4Q14997 1843 aa24.35■■□□□ 1.49
NDUFA3-213ENST00000484103 ZNF280AP59817 542 aaPredicted RBP24.35■■□□□ 1.49
NDUFA3-213ENST00000484103 COA1Q9GZY4 146 aa24.35■■□□□ 1.49
NDUFA3-213ENST00000484103 GBA2Q9HCG7 927 aaPredicted RBP24.35■■□□□ 1.49
NDUFA3-213ENST00000484103 THSD7BQ9C0I4 1608 aa24.35■■□□□ 1.49
NDUFA3-213ENST00000484103 ZNF521Q96K83 1311 aa24.35■■□□□ 1.49
NDUFA3-213ENST00000484103 DACT2Q5SW24 774 aa24.34■■□□□ 1.49
NDUFA3-213ENST00000484103 GMLQ99445 158 aa24.34■■□□□ 1.49
NDUFA3-213ENST00000484103 C2orf69Q8N8R5 385 aa24.33■■□□□ 1.49
NDUFA3-213ENST00000484103 CDCA5Q96FF9 252 aa24.33■■□□□ 1.49
NDUFA3-213ENST00000484103 SRCIN1Q9C0H9 1055 aa24.33■■□□□ 1.49
NDUFA3-213ENST00000484103 PRDM10Q9NQV6 1147 aa24.33■■□□□ 1.49
NDUFA3-213ENST00000484103 GTF2IP78347 998 aa24.32■■□□□ 1.48
NDUFA3-213ENST00000484103 CCDC57Q2TAC2 916 aa24.32■■□□□ 1.48
NDUFA3-213ENST00000484103 PRAMEF18Q5VWM3 479 aa24.32■■□□□ 1.48
NDUFA3-213ENST00000484103 ZIC5Q96T25 663 aa24.32■■□□□ 1.48
NDUFA3-213ENST00000484103 SASH1O94885 1247 aa24.31■■□□□ 1.48
NDUFA3-213ENST00000484103 NBPF9Q3BBW0 867 aa24.31■■□□□ 1.48
NDUFA3-213ENST00000484103 TTLL5Q6EMB2 1281 aa24.31■■□□□ 1.48
NDUFA3-213ENST00000484103 KIAA0825Q8IV33 1275 aa24.31■■□□□ 1.48
NDUFA3-213ENST00000484103 SUCLG2Q96I99 432 aa24.31■■□□□ 1.48
NDUFA3-213ENST00000484103 CNNM1Q9NRU3 951 aa24.31■■□□□ 1.48
NDUFA3-213ENST00000484103 JAG2Q9Y219 1238 aa24.31■■□□□ 1.48
NDUFA3-213ENST00000484103 STRIP1Q5VSL9 837 aa24.3■■□□□ 1.48
NDUFA3-213ENST00000484103 OGFOD1Q8N543 542 aa24.3■■□□□ 1.48
NDUFA3-213ENST00000484103 MAP2K2P36507 400 aa24.29■■□□□ 1.48
NDUFA3-213ENST00000484103 LDHAL6AQ6ZMR3 332 aa24.29■■□□□ 1.48
NDUFA3-213ENST00000484103 MRPL50Q8N5N7 158 aaKnown RBP24.29■■□□□ 1.48
NDUFA3-213ENST00000484103 CDCA7LQ96GN5 454 aa24.29■■□□□ 1.48
NDUFA3-213ENST00000484103 HHIPL1Q96JK4 782 aa24.29■■□□□ 1.48
NDUFA3-213ENST00000484103 ZNF609O15014 1411 aa24.28■■□□□ 1.48
NDUFA3-213ENST00000484103 ALDH1L1O75891 902 aa24.28■■□□□ 1.48
NDUFA3-213ENST00000484103 ZNF157P51786 506 aaPredicted RBP24.28■■□□□ 1.48
NDUFA3-213ENST00000484103 RGMBQ6NW40 437 aa24.28■■□□□ 1.48
NDUFA3-213ENST00000484103 CD209Q9NNX6 404 aa24.28■■□□□ 1.48
NDUFA3-213ENST00000484103 ZNF646O15015 1829 aaPredicted RBP24.28■■□□□ 1.48
NDUFA3-213ENST00000484103 E9PSI1 815 aa24.27■■□□□ 1.48
NDUFA3-213ENST00000484103 F8W031 263 aaPredicted RBP24.27■■□□□ 1.48
NDUFA3-213ENST00000484103 NBPF7P0C2Y1 421 aaPredicted RBP24.27■■□□□ 1.48
NDUFA3-213ENST00000484103 MOB2Q70IA6 237 aa24.27■■□□□ 1.48
NDUFA3-213ENST00000484103 A0A1B0GUL6 1792 aa24.26■■□□□ 1.47
NDUFA3-213ENST00000484103 SSH1Q8WYL5 1049 aa24.26■■□□□ 1.47
NDUFA3-213ENST00000484103 MYO3BQ8WXR4 1341 aa24.26■■□□□ 1.47
NDUFA3-213ENST00000484103 NOGQ13253 232 aa24.25■■□□□ 1.47
NDUFA3-213ENST00000484103 PUS3Q9BZE2 481 aaKnown RBP24.25■■□□□ 1.47
NDUFA3-213ENST00000484103 WNT10BO00744 389 aa24.24■■□□□ 1.47
NDUFA3-213ENST00000484103 BRPF1P55201 1214 aaPredicted RBP24.24■■□□□ 1.47
NDUFA3-213ENST00000484103 SLFN5Q08AF3 891 aa24.24■■□□□ 1.47
NDUFA3-213ENST00000484103 TTLL12Q14166 644 aaPredicted RBP24.24■■□□□ 1.47
NDUFA3-213ENST00000484103 ZNF804AQ7Z570 1209 aa24.24■■□□□ 1.47
NDUFA3-213ENST00000484103 KAZALD1Q96I82 304 aa24.24■■□□□ 1.47
NDUFA3-213ENST00000484103 BICC1Q9H694 974 aaKnown RBP24.24■■□□□ 1.47
NDUFA3-213ENST00000484103 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.24■■□□□ 1.47
NDUFA3-213ENST00000484103 PRKG1Q13976 671 aa24.23■■□□□ 1.47
NDUFA3-213ENST00000484103 HDAC9Q9UKV0 1011 aa24.23■■□□□ 1.47
NDUFA3-213ENST00000484103 IRS2Q9Y4H2 1338 aa24.22■■□□□ 1.47
NDUFA3-213ENST00000484103 FAM155AB1AL88 458 aaPredicted RBP24.22■■□□□ 1.47
NDUFA3-213ENST00000484103 CERS5Q8N5B7 392 aa24.22■■□□□ 1.47
NDUFA3-213ENST00000484103 SMC4Q9NTJ3 1288 aa24.22■■□□□ 1.47
NDUFA3-213ENST00000484103 PCDHAC2Q9Y5I4 1007 aa24.22■■□□□ 1.47
NDUFA3-213ENST00000484103 PITPNM2Q9BZ72 1349 aa24.21■■□□□ 1.47
NDUFA3-213ENST00000484103 KIF23Q02241 960 aaPredicted RBP24.21■■□□□ 1.47
NDUFA3-213ENST00000484103 UBE2Q2LH0YL09 131 aa24.2■■□□□ 1.46
NDUFA3-213ENST00000484103 GYG1P46976 350 aa24.2■■□□□ 1.46
NDUFA3-213ENST00000484103 CCDC102AQ96A19 550 aa24.2■■□□□ 1.46
NDUFA3-213ENST00000484103 PTPRCP08575 1304 aa24.19■■□□□ 1.46
NDUFA3-213ENST00000484103 KLHDC4Q8TBB5 520 aa24.19■■□□□ 1.46
NDUFA3-213ENST00000484103 MKRN3Q13064 507 aaKnown RBP24.18■■□□□ 1.46
NDUFA3-213ENST00000484103 DLGAP5Q15398 846 aa24.18■■□□□ 1.46
NDUFA3-213ENST00000484103 CLRN2A0PK11 232 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms