RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 PDE8AO60658 829 aa8.65□□□□□ -1.02
BRCA1-216ENST00000484087 CASP7P55210 303 aa8.65□□□□□ -1.02
BRCA1-216ENST00000484087 CTSWP56202 376 aa8.65□□□□□ -1.02
BRCA1-216ENST00000484087 SF3B3Q15393 1217 aaKnown RBP8.65□□□□□ -1.02
BRCA1-216ENST00000484087 EPHA10Q5JZY3 1008 aa8.65□□□□□ -1.02
BRCA1-216ENST00000484087 SOGA3Q5TF21 947 aa8.65□□□□□ -1.02
BRCA1-216ENST00000484087 RTKN2Q8IZC4 609 aa8.65□□□□□ -1.02
BRCA1-216ENST00000484087 LARGE2Q8N3Y3 721 aa8.65□□□□□ -1.02
BRCA1-216ENST00000484087 TMEM57Q8N5G2 664 aa8.65□□□□□ -1.02
BRCA1-216ENST00000484087 PTPRCP08575 1304 aa8.65□□□□□ -1.02
BRCA1-216ENST00000484087 CDHR2Q9BYE9 1310 aa8.65□□□□□ -1.02
BRCA1-216ENST00000484087 H7C1W4 665 aa8.64□□□□□ -1.03
BRCA1-216ENST00000484087 RIMBP2O15034 1052 aa8.64□□□□□ -1.03
BRCA1-216ENST00000484087 GSE1Q14687 1217 aa8.64□□□□□ -1.03
BRCA1-216ENST00000484087 DCAF8Q5TAQ9 597 aa8.64□□□□□ -1.03
BRCA1-216ENST00000484087 DPP8Q6V1X1 898 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-216ENST00000484087 MPNDQ8N594 471 aa8.64□□□□□ -1.03
BRCA1-216ENST00000484087 TTLL11Q8NHH1 800 aa8.64□□□□□ -1.03
BRCA1-216ENST00000484087 PSMD1Q99460 953 aa8.64□□□□□ -1.03
BRCA1-216ENST00000484087 NSFL1CQ9UNZ2 370 aaKnown RBP8.64□□□□□ -1.03
BRCA1-216ENST00000484087 GJA3Q9Y6H8 435 aa8.64□□□□□ -1.03
BRCA1-216ENST00000484087 SCN4AP35499 1836 aa8.64□□□□□ -1.03
BRCA1-216ENST00000484087 ADAMTSL1Q8N6G6 1762 aa8.64□□□□□ -1.03
BRCA1-216ENST00000484087 SHTN1A0MZ66 631 aa8.64□□□□□ -1.03
BRCA1-216ENST00000484087 SNAP23O00161 211 aa8.64□□□□□ -1.03
BRCA1-216ENST00000484087 SP8Q8IXZ3 490 aa8.64□□□□□ -1.03
BRCA1-216ENST00000484087 LINS1Q8NG48 757 aa8.64□□□□□ -1.03
BRCA1-216ENST00000484087 TMEM121BQ9BXQ6 578 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-216ENST00000484087 DBNDD1Q9H9R9 158 aa8.64□□□□□ -1.03
BRCA1-216ENST00000484087 KCNQ5Q9NR82 932 aa8.64□□□□□ -1.03
BRCA1-216ENST00000484087 POLLQ9UGP5 575 aa8.64□□□□□ -1.03
BRCA1-216ENST00000484087 CHMP3Q9Y3E7 222 aa8.64□□□□□ -1.03
BRCA1-216ENST00000484087 YDJCA8MPS7 323 aa8.63□□□□□ -1.03
BRCA1-216ENST00000484087 FZD9O00144 591 aa8.63□□□□□ -1.03
BRCA1-216ENST00000484087 BBOX1O75936 387 aa8.63□□□□□ -1.03
BRCA1-216ENST00000484087 RAD17O75943 681 aa8.63□□□□□ -1.03
BRCA1-216ENST00000484087 NBPF7P0C2Y1 421 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-216ENST00000484087 KLRK1P26718 216 aa8.63□□□□□ -1.03
BRCA1-216ENST00000484087 RPS8P62241 208 aaKnown RBP8.63□□□□□ -1.03
BRCA1-216ENST00000484087 DOK7Q18PE1 504 aa8.63□□□□□ -1.03
BRCA1-216ENST00000484087 CCDC152Q4G0S7 254 aa8.63□□□□□ -1.03
BRCA1-216ENST00000484087 SUCLG2Q96I99 432 aa8.63□□□□□ -1.03
BRCA1-216ENST00000484087 ZNF594Q96JF6 807 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-216ENST00000484087 ZC3H4Q9UPT8 1303 aaKnown RBP8.63□□□□□ -1.03
BRCA1-216ENST00000484087 PSME4Q14997 1843 aa8.62□□□□□ -1.03
BRCA1-216ENST00000484087 C6orf229H3BNL8 230 aa8.62□□□□□ -1.03
BRCA1-216ENST00000484087 TOMM70O94826 608 aa8.62□□□□□ -1.03
BRCA1-216ENST00000484087 UFL1O94874 794 aa8.62□□□□□ -1.03
BRCA1-216ENST00000484087 IGHDP01880 384 aa8.62□□□□□ -1.03
BRCA1-216ENST00000484087 ITGA6P23229 1130 aa8.62□□□□□ -1.03
BRCA1-216ENST00000484087 FOXO4P98177 505 aa8.62□□□□□ -1.03
BRCA1-216ENST00000484087 HDAC1Q13547 482 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-216ENST00000484087 NIM1KQ8IY84 436 aa8.62□□□□□ -1.03
BRCA1-216ENST00000484087 C16orf71Q8IYS4 520 aaPredicted RBP8.62□□□□□ -1.03
BRCA1-216ENST00000484087 TBC1D16Q8TBP0 767 aa8.62□□□□□ -1.03
BRCA1-216ENST00000484087 JDP2Q8WYK2 163 aa8.62□□□□□ -1.03
BRCA1-216ENST00000484087 KAZALD1Q96I82 304 aa8.62□□□□□ -1.03
BRCA1-216ENST00000484087 ZBTB40Q9NUA8 1239 aa8.62□□□□□ -1.03
BRCA1-216ENST00000484087 PCDHB15Q9Y5E8 787 aa8.62□□□□□ -1.03
BRCA1-216ENST00000484087 GRM8O00222 908 aa8.61□□□□□ -1.03
BRCA1-216ENST00000484087 RGS3P49796 1198 aa8.61□□□□□ -1.03
BRCA1-216ENST00000484087 SCNN1DP51172 638 aa8.61□□□□□ -1.03
BRCA1-216ENST00000484087 FMR1Q06787 632 aaKnown RBP eCLIP8.61□□□□□ -1.03
BRCA1-216ENST00000484087 KIAA2012Q0VF49 1180 aa8.61□□□□□ -1.03
BRCA1-216ENST00000484087 EAPPQ56P03 285 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-216ENST00000484087 CC2D2BQ6DHV5 1058 aa8.61□□□□□ -1.03
BRCA1-216ENST00000484087 DPY19L2Q6NUT2 758 aa8.61□□□□□ -1.03
BRCA1-216ENST00000484087 ANKRD18AQ8IVF6 992 aa8.61□□□□□ -1.03
BRCA1-216ENST00000484087 HELBQ8NG08 1087 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-216ENST00000484087 RTFDC1Q9BY42 306 aaPredicted RBP8.61□□□□□ -1.03
BRCA1-216ENST00000484087 SRCIN1Q9C0H9 1055 aa8.61□□□□□ -1.03
BRCA1-216ENST00000484087 ANKIB1Q9P2G1 1089 aa8.61□□□□□ -1.03
BRCA1-216ENST00000484087 ZBTB7BO15156 539 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-216ENST00000484087 VEGFAP15692 232 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-216ENST00000484087 PDE4AP27815 886 aa8.6□□□□□ -1.03
BRCA1-216ENST00000484087 EPS15P42566 896 aa8.6□□□□□ -1.03
BRCA1-216ENST00000484087 EIF6P56537 245 aaKnown RBP8.6□□□□□ -1.03
BRCA1-216ENST00000484087 CXCL9Q07325 125 aa8.6□□□□□ -1.03
BRCA1-216ENST00000484087 INTS3Q68E01 1043 aaKnown RBP8.6□□□□□ -1.03
BRCA1-216ENST00000484087 LMBR1LQ6UX01 489 aa8.6□□□□□ -1.03
BRCA1-216ENST00000484087 TXNRD3Q86VQ6 643 aa8.6□□□□□ -1.03
BRCA1-216ENST00000484087 KLHDC4Q8TBB5 520 aa8.6□□□□□ -1.03
BRCA1-216ENST00000484087 TMX4Q9H1E5 349 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-216ENST00000484087 OCEL1Q9H607 264 aa8.6□□□□□ -1.03
BRCA1-216ENST00000484087 C9orf78Q9NZ63 289 aaPredicted RBP8.6□□□□□ -1.03
BRCA1-216ENST00000484087 RTL9Q8NET4 1388 aa8.6□□□□□ -1.03
BRCA1-216ENST00000484087 ECE2O60344 883 aa8.59□□□□□ -1.03
BRCA1-216ENST00000484087 TAF5LO75529 589 aa8.59□□□□□ -1.03
BRCA1-216ENST00000484087 PYGBP11216 843 aa8.59□□□□□ -1.03
BRCA1-216ENST00000484087 ANP32AP39687 249 aaKnown RBP8.59□□□□□ -1.03
BRCA1-216ENST00000484087 GMPSP49915 693 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-216ENST00000484087 CCT4P50991 539 aaKnown RBP8.59□□□□□ -1.03
BRCA1-216ENST00000484087 WASHC4Q2M389 1173 aa8.59□□□□□ -1.03
BRCA1-216ENST00000484087 MXD3Q9BW11 206 aa8.59□□□□□ -1.03
BRCA1-216ENST00000484087 PLA2G12BQ9BX93 195 aa8.59□□□□□ -1.03
BRCA1-216ENST00000484087 PUS3Q9BZE2 481 aaKnown RBP8.59□□□□□ -1.03
BRCA1-216ENST00000484087 TAF1DQ9H5J8 278 aaPredicted RBP8.59□□□□□ -1.03
BRCA1-216ENST00000484087 BICC1Q9H694 974 aaKnown RBP8.59□□□□□ -1.03
BRCA1-216ENST00000484087 MINPP1Q9UNW1 487 aa8.59□□□□□ -1.03
BRCA1-216ENST00000484087 PSMD14O00487 310 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms