RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 GPR25O00155 361 aa16.71■□□□□ 0.27
UBR4-213ENST00000483922 MKRN3Q13064 507 aaKnown RBP16.71■□□□□ 0.27
UBR4-213ENST00000483922 ANKRD18AQ8IVF6 992 aa16.71■□□□□ 0.27
UBR4-213ENST00000483922 FZD1Q9UP38 647 aa16.71■□□□□ 0.27
UBR4-213ENST00000483922 PTPN12Q05209 780 aaKnown RBP16.7■□□□□ 0.26
UBR4-213ENST00000483922 TSPYL6Q8N831 410 aa16.7■□□□□ 0.26
UBR4-213ENST00000483922 GREM2Q9H772 168 aa16.7■□□□□ 0.26
UBR4-213ENST00000483922 CENPFP49454 3210 aa16.69■□□□□ 0.26
UBR4-213ENST00000483922 KLRK1P26718 216 aa16.69■□□□□ 0.26
UBR4-213ENST00000483922 CTSWP56202 376 aa16.69■□□□□ 0.26
UBR4-213ENST00000483922 DDX10Q13206 875 aaKnown RBP16.69■□□□□ 0.26
UBR4-213ENST00000483922 PRPF38BQ5VTL8 546 aaKnown RBP16.69■□□□□ 0.26
UBR4-213ENST00000483922 ZBED3Q96IU2 234 aaPredicted RBP16.69■□□□□ 0.26
UBR4-213ENST00000483922 BSDC1Q9NW68 430 aaPredicted RBP16.69■□□□□ 0.26
UBR4-213ENST00000483922 MED23Q9ULK4 1368 aa16.68■□□□□ 0.26
UBR4-213ENST00000483922 APAF1O14727 1248 aa16.68■□□□□ 0.26
UBR4-213ENST00000483922 SASH1O94885 1247 aa16.68■□□□□ 0.26
UBR4-213ENST00000483922 CCT4P50991 539 aaKnown RBP16.68■□□□□ 0.26
UBR4-213ENST00000483922 IFT57Q9NWB7 429 aa16.68■□□□□ 0.26
UBR4-213ENST00000483922 MAP3K2Q9Y2U5 619 aa16.68■□□□□ 0.26
UBR4-213ENST00000483922 BRCA2P51587 3418 aa16.67■□□□□ 0.26
UBR4-213ENST00000483922 PRKG1Q13976 671 aa16.67■□□□□ 0.26
UBR4-213ENST00000483922 WDR43Q15061 677 aaKnown RBP eCLIP16.67■□□□□ 0.26
UBR4-213ENST00000483922 PKN2Q16513 984 aaKnown RBP16.67■□□□□ 0.26
UBR4-213ENST00000483922 NOM1Q5C9Z4 860 aaKnown RBP16.67■□□□□ 0.26
UBR4-213ENST00000483922 LDLRAD1Q5T700 205 aa16.67■□□□□ 0.26
UBR4-213ENST00000483922 STRIP1Q5VSL9 837 aa16.67■□□□□ 0.26
UBR4-213ENST00000483922 CFHR5Q9BXR6 569 aa16.67■□□□□ 0.26
UBR4-213ENST00000483922 HDAC9Q9UKV0 1011 aa16.67■□□□□ 0.26
UBR4-213ENST00000483922 PI4KAP2A4QPH2 592 aa16.66■□□□□ 0.26
UBR4-213ENST00000483922 HSP90B1P14625 803 aaKnown RBP16.66■□□□□ 0.26
UBR4-213ENST00000483922 CWF19L2Q2TBE0 894 aaKnown RBP16.66■□□□□ 0.26
UBR4-213ENST00000483922 G2E3Q7L622 706 aa16.66■□□□□ 0.26
UBR4-213ENST00000483922 PI4KAP1Q8N8J0 262 aa16.66■□□□□ 0.26
UBR4-213ENST00000483922 PCDHAC2Q9Y5I4 1007 aa16.66■□□□□ 0.26
UBR4-213ENST00000483922 H7C1W4 665 aa16.65■□□□□ 0.26
UBR4-213ENST00000483922 SNAP23O00161 211 aa16.65■□□□□ 0.26
UBR4-213ENST00000483922 GNAI1P63096 354 aa16.65■□□□□ 0.26
UBR4-213ENST00000483922 TTLL12Q14166 644 aaPredicted RBP16.65■□□□□ 0.26
UBR4-213ENST00000483922 FBXO46Q6PJ61 603 aaPredicted RBP16.65■□□□□ 0.26
UBR4-213ENST00000483922 KSR2Q6VAB6 950 aa16.65■□□□□ 0.26
UBR4-213ENST00000483922 CDC5LQ99459 802 aaKnown RBP16.65■□□□□ 0.26
UBR4-213ENST00000483922 SPRYD7Q5W111 196 aa16.64■□□□□ 0.25
UBR4-213ENST00000483922 TTLL5Q6EMB2 1281 aa16.64■□□□□ 0.25
UBR4-213ENST00000483922 KIAA0825Q8IV33 1275 aa16.64■□□□□ 0.25
UBR4-213ENST00000483922 FBXW7Q969H0 707 aa16.64■□□□□ 0.25
UBR4-213ENST00000483922 COA1Q9GZY4 146 aa16.64■□□□□ 0.25
UBR4-213ENST00000483922 AOX1Q06278 1338 aa16.64■□□□□ 0.25
UBR4-213ENST00000483922 IRS2Q9Y4H2 1338 aa16.64■□□□□ 0.25
UBR4-213ENST00000483922 SPEF2Q9C093 1822 aa16.63■□□□□ 0.25
UBR4-213ENST00000483922 NEURL1BA8MQ27 555 aa16.63■□□□□ 0.25
UBR4-213ENST00000483922 CASP7P55210 303 aa16.63■□□□□ 0.25
UBR4-213ENST00000483922 CAP1Q01518 475 aa16.63■□□□□ 0.25
UBR4-213ENST00000483922 OGFOD1Q8N543 542 aa16.63■□□□□ 0.25
UBR4-213ENST00000483922 CERS5Q8N5B7 392 aa16.63■□□□□ 0.25
UBR4-213ENST00000483922 FKTNO75072 461 aa16.62■□□□□ 0.25
UBR4-213ENST00000483922 GTF2IP78347 998 aa16.62■□□□□ 0.25
UBR4-213ENST00000483922 CCDC30Q5VVM6 783 aa16.62■□□□□ 0.25
UBR4-213ENST00000483922 CLMNQ96JQ2 1002 aa16.62■□□□□ 0.25
UBR4-213ENST00000483922 LEMD3Q9Y2U8 911 aa16.62■□□□□ 0.25
UBR4-213ENST00000483922 SSC5DA1L4H1 1573 aa16.62■□□□□ 0.25
UBR4-213ENST00000483922 ZNF804BA4D1E1 1349 aa16.62■□□□□ 0.25
UBR4-213ENST00000483922 POTEFA5A3E0 1075 aa16.61■□□□□ 0.25
UBR4-213ENST00000483922 DDX58O95786 925 aaKnown RBP16.61■□□□□ 0.25
UBR4-213ENST00000483922 CSF1RP07333 972 aa16.61■□□□□ 0.25
UBR4-213ENST00000483922 ANGEL1Q9UNK9 670 aaKnown RBP16.61■□□□□ 0.25
UBR4-213ENST00000483922 MYO3BQ8WXR4 1341 aa16.61■□□□□ 0.25
UBR4-213ENST00000483922 IGF2BP3O00425 579 aaKnown RBP eCLIP16.6■□□□□ 0.25
UBR4-213ENST00000483922 SREBF2Q12772 1141 aa16.6■□□□□ 0.25
UBR4-213ENST00000483922 UBE3BQ7Z3V4 1068 aa16.6■□□□□ 0.25
UBR4-213ENST00000483922 TSR2Q969E8 191 aaKnown RBP16.6■□□□□ 0.25
UBR4-213ENST00000483922 DEFB129Q9H1M3 183 aa16.6■□□□□ 0.25
UBR4-213ENST00000483922 CD209Q9NNX6 404 aa16.6■□□□□ 0.25
UBR4-213ENST00000483922 ITGA6P23229 1130 aa16.59■□□□□ 0.25
UBR4-213ENST00000483922 GJA5P36382 358 aa16.59■□□□□ 0.25
UBR4-213ENST00000483922 MAP3K11Q16584 847 aa16.59■□□□□ 0.25
UBR4-213ENST00000483922 ARMC9Q7Z3E5 817 aa16.59■□□□□ 0.25
UBR4-213ENST00000483922 IFNL1Q8IU54 200 aa16.59■□□□□ 0.25
UBR4-213ENST00000483922 PLA2G12BQ9BX93 195 aa16.59■□□□□ 0.25
UBR4-213ENST00000483922 PRKRIP1Q9H875 184 aaPredicted RBP16.59■□□□□ 0.25
UBR4-213ENST00000483922 NF2P35240 595 aa16.58■□□□□ 0.24
UBR4-213ENST00000483922 CHRNDQ07001 517 aa16.58■□□□□ 0.24
UBR4-213ENST00000483922 GCKRQ14397 625 aa16.58■□□□□ 0.24
UBR4-213ENST00000483922 OTOP1Q7RTM1 612 aa16.58■□□□□ 0.24
UBR4-213ENST00000483922 APOBEC3FQ8IUX4 373 aaKnown RBP16.58■□□□□ 0.24
UBR4-213ENST00000483922 MTMR14Q8NCE2 650 aa16.58■□□□□ 0.24
UBR4-213ENST00000483922 PRMT6Q96LA8 375 aaPredicted RBP16.58■□□□□ 0.24
UBR4-213ENST00000483922 PTPN18Q99952 460 aa16.58■□□□□ 0.24
UBR4-213ENST00000483922 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.58■□□□□ 0.24
UBR4-213ENST00000483922 MYH3P11055 1940 aa16.57■□□□□ 0.24
UBR4-213ENST00000483922 TAF5LO75529 589 aa16.57■□□□□ 0.24
UBR4-213ENST00000483922 MMP14P50281 582 aa16.57■□□□□ 0.24
UBR4-213ENST00000483922 HELBQ8NG08 1087 aaPredicted RBP16.57■□□□□ 0.24
UBR4-213ENST00000483922 SLC10A4Q96EP9 437 aa16.57■□□□□ 0.24
UBR4-213ENST00000483922 WNK4Q96J92 1243 aa16.57■□□□□ 0.24
UBR4-213ENST00000483922 TRIM17Q9Y577 477 aa16.57■□□□□ 0.24
UBR4-213ENST00000483922 USP2O75604 605 aaPredicted RBP16.56■□□□□ 0.24
UBR4-213ENST00000483922 SLC4A2P04920 1241 aa16.56■□□□□ 0.24
UBR4-213ENST00000483922 IGHMBP2P38935 993 aaKnown RBP16.56■□□□□ 0.24
UBR4-213ENST00000483922 NBPF12Q5TAG4 269 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms